RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 UNC93B1Q9H1C4 597 aa33.93■■■■□ 3.02
CHCHD4-202ENST00000396914 CENPFP49454 3210 aa33.92■■■■□ 3.02
CHCHD4-202ENST00000396914 CAPN15O75808 1086 aa33.92■■■■□ 3.02
CHCHD4-202ENST00000396914 GPKOWQ92917 476 aaPredicted RBP eCLIP33.92■■■■□ 3.02
CHCHD4-202ENST00000396914 HMX1Q9NP08 348 aaPredicted RBP33.92■■■■□ 3.02
CHCHD4-202ENST00000396914 SOWAHBA6NEL2 793 aa33.91■■■■□ 3.02
CHCHD4-202ENST00000396914 CNGA1P29973 690 aa33.91■■■■□ 3.02
CHCHD4-202ENST00000396914 SLC26A6Q9BXS9 759 aa33.91■■■■□ 3.02
CHCHD4-202ENST00000396914 ADD3Q9UEY8 706 aaKnown RBP33.91■■■■□ 3.02
CHCHD4-202ENST00000396914 RBBP6Q7Z6E9 1792 aaKnown RBP33.9■■■■□ 3.02
CHCHD4-202ENST00000396914 ZNF467Q7Z7K2 595 aaPredicted RBP33.9■■■■□ 3.02
CHCHD4-202ENST00000396914 RPTORQ8N122 1335 aa33.9■■■■□ 3.02
CHCHD4-202ENST00000396914 PFKFB2O60825 505 aa33.88■■■■□ 3.01
CHCHD4-202ENST00000396914 IFNAR1P17181 557 aa33.88■■■■□ 3.01
CHCHD4-202ENST00000396914 SCRN1Q12765 414 aa33.88■■■■□ 3.01
CHCHD4-202ENST00000396914 PRAMEF19Q5SWL8 479 aa33.88■■■■□ 3.01
CHCHD4-202ENST00000396914 TRIM22Q8IYM9 498 aa33.88■■■■□ 3.01
CHCHD4-202ENST00000396914 MSL3Q8N5Y2 521 aaKnown RBP33.88■■■■□ 3.01
CHCHD4-202ENST00000396914 FGD4Q96M96 766 aa33.88■■■■□ 3.01
CHCHD4-202ENST00000396914 RBM27Q9P2N5 1060 aaKnown RBP33.88■■■■□ 3.01
CHCHD4-202ENST00000396914 CNPY2Q9Y2B0 182 aa33.88■■■■□ 3.01
CHCHD4-202ENST00000396914 ASB14A6NK59 587 aa33.87■■■■□ 3.01
CHCHD4-202ENST00000396914 GCOM1H8Y6P7 765 aaPredicted RBP33.87■■■■□ 3.01
CHCHD4-202ENST00000396914 OPLAHO14841 1288 aa33.87■■■■□ 3.01
CHCHD4-202ENST00000396914 ST18O60284 1047 aa33.87■■■■□ 3.01
CHCHD4-202ENST00000396914 POLR2MP0CAP2 368 aa33.87■■■■□ 3.01
CHCHD4-202ENST00000396914 HOXA13P31271 388 aaPredicted RBP33.87■■■■□ 3.01
CHCHD4-202ENST00000396914 SSRP1Q08945 709 aaKnown RBP33.87■■■■□ 3.01
CHCHD4-202ENST00000396914 NTRK3Q16288 839 aa33.87■■■■□ 3.01
CHCHD4-202ENST00000396914 MAP3K21Q5TCX8 1036 aa33.87■■■■□ 3.01
CHCHD4-202ENST00000396914 WWC2Q6AWC2 1192 aa33.87■■■■□ 3.01
CHCHD4-202ENST00000396914 NECAB1Q8N987 351 aa33.87■■■■□ 3.01
CHCHD4-202ENST00000396914 XRN2Q9H0D6 950 aaKnown RBP eCLIP33.87■■■■□ 3.01
CHCHD4-202ENST00000396914 LIMCH1Q9UPQ0 1083 aa33.87■■■■□ 3.01
CHCHD4-202ENST00000396914 PRPF3O43395 683 aaKnown RBP33.87■■■■□ 3.01
CHCHD4-202ENST00000396914 CCND3P30281 292 aaPredicted RBP33.87■■■■□ 3.01
CHCHD4-202ENST00000396914 NAPAP54920 295 aa33.87■■■■□ 3.01
CHCHD4-202ENST00000396914 SOX10P56693 466 aa33.87■■■■□ 3.01
CHCHD4-202ENST00000396914 ME3Q16798 604 aa33.87■■■■□ 3.01
CHCHD4-202ENST00000396914 ARMCX2Q7L311 632 aa33.87■■■■□ 3.01
CHCHD4-202ENST00000396914 SYTL5Q8TDW5 730 aaPredicted RBP33.87■■■■□ 3.01
CHCHD4-202ENST00000396914 CUL5Q93034 780 aa33.87■■■■□ 3.01
CHCHD4-202ENST00000396914 MAF1Q9H063 256 aa33.87■■■■□ 3.01
CHCHD4-202ENST00000396914 SYNGAP1Q96PV0 1343 aa33.86■■■■□ 3.01
CHCHD4-202ENST00000396914 LARGE1O95461 756 aa33.86■■■■□ 3.01
CHCHD4-202ENST00000396914 MAMDC4Q6UXC1 1216 aa33.86■■■■□ 3.01
CHCHD4-202ENST00000396914 MPHOSPH6Q99547 160 aaKnown RBP33.86■■■■□ 3.01
CHCHD4-202ENST00000396914 RNF26Q9BY78 433 aaPredicted RBP33.86■■■■□ 3.01
CHCHD4-202ENST00000396914 CDKN2AIPQ9NXV6 580 aaPredicted RBP33.86■■■■□ 3.01
CHCHD4-202ENST00000396914 CDKL5O76039 1030 aa33.85■■■■□ 3.01
CHCHD4-202ENST00000396914 SCG2P13521 617 aa33.85■■■■□ 3.01
CHCHD4-202ENST00000396914 ALDH5A1P51649 535 aaPredicted RBP33.85■■■■□ 3.01
CHCHD4-202ENST00000396914 HSD17B4P51659 736 aa33.85■■■■□ 3.01
CHCHD4-202ENST00000396914 PFKFB3Q16875 520 aaPredicted RBP33.85■■■■□ 3.01
CHCHD4-202ENST00000396914 FCHSD1Q86WN1 690 aa33.85■■■■□ 3.01
CHCHD4-202ENST00000396914 DEFB118Q96PH6 123 aa33.85■■■■□ 3.01
CHCHD4-202ENST00000396914 PSTPIP2Q9H939 334 aa33.85■■■■□ 3.01
CHCHD4-202ENST00000396914 ZHX1Q9UKY1 873 aaPredicted RBP33.85■■■■□ 3.01
CHCHD4-202ENST00000396914 DDX49Q9Y6V7 483 aaKnown RBP33.85■■■■□ 3.01
CHCHD4-202ENST00000396914 DNERQ8NFT8 737 aa33.84■■■■□ 3.01
CHCHD4-202ENST00000396914 SMARCC2Q8TAQ2 1214 aa33.84■■■■□ 3.01
CHCHD4-202ENST00000396914 TAAR1Q96RJ0 339 aa33.84■■■■□ 3.01
CHCHD4-202ENST00000396914 MAP3K20Q9NYL2 800 aaKnown RBP33.84■■■■□ 3.01
CHCHD4-202ENST00000396914 COL20A1Q9P218 1284 aa33.84■■■■□ 3.01
CHCHD4-202ENST00000396914 ASTN1O14525 1302 aa33.84■■■■□ 3.01
CHCHD4-202ENST00000396914 B4DLN1 442 aa33.83■■■■□ 3.01
CHCHD4-202ENST00000396914 hCG_1984214I3L0E3 225 aa33.83■■■■□ 3.01
CHCHD4-202ENST00000396914 IGHA2P01877 340 aa33.83■■■■□ 3.01
CHCHD4-202ENST00000396914 CYBAP13498 195 aa33.83■■■■□ 3.01
CHCHD4-202ENST00000396914 MRPL12P52815 198 aaKnown RBP33.83■■■■□ 3.01
CHCHD4-202ENST00000396914 ARHGEF16Q5VV41 709 aa33.83■■■■□ 3.01
CHCHD4-202ENST00000396914 SAMD3Q8N6K7 520 aa33.83■■■■□ 3.01
CHCHD4-202ENST00000396914 ZNF713Q8N859 430 aaPredicted RBP33.83■■■■□ 3.01
CHCHD4-202ENST00000396914 TRPV1Q8NER1 839 aa33.83■■■■□ 3.01
CHCHD4-202ENST00000396914 RMDN3Q96TC7 470 aa33.83■■■■□ 3.01
CHCHD4-202ENST00000396914 SNAI1O95863 264 aaPredicted RBP33.82■■■■□ 3
CHCHD4-202ENST00000396914 NSUN6Q8TEA1 469 aaKnown RBP33.82■■■■□ 3
CHCHD4-202ENST00000396914 BARHL2Q9NY43 387 aa33.82■■■■□ 3
CHCHD4-202ENST00000396914 LCTP09848 1927 aa33.82■■■■□ 3
CHCHD4-202ENST00000396914 STXBP3O00186 592 aa33.81■■■■□ 3
CHCHD4-202ENST00000396914 PDE4DQ08499 809 aa33.81■■■■□ 3
CHCHD4-202ENST00000396914 EEPD1Q7L9B9 569 aa33.81■■■■□ 3
CHCHD4-202ENST00000396914 GTF3C6Q969F1 213 aa33.81■■■■□ 3
CHCHD4-202ENST00000396914 GJB1P08034 283 aa33.8■■■■□ 3
CHCHD4-202ENST00000396914 PPP1R18Q6NYC8 613 aa33.8■■■■□ 3
CHCHD4-202ENST00000396914 USP17L6PQ6QN14 398 aa33.8■■■■□ 3
CHCHD4-202ENST00000396914 ABHD16BQ9H3Z7 469 aa33.8■■■■□ 3
CHCHD4-202ENST00000396914 PAK6Q9NQU5 681 aaPredicted RBP33.8■■■■□ 3
CHCHD4-202ENST00000396914 NRBP1Q9UHY1 535 aa33.8■■■■□ 3
CHCHD4-202ENST00000396914 POTEFA5A3E0 1075 aa33.79■■■■□ 3
CHCHD4-202ENST00000396914 EIF2AK2P19525 551 aaKnown RBP33.79■■■■□ 3
CHCHD4-202ENST00000396914 GHRHRQ02643 423 aa33.79■■■■□ 3
CHCHD4-202ENST00000396914 ACVR2BQ13705 512 aa33.79■■■■□ 3
CHCHD4-202ENST00000396914 PKN1Q16512 942 aa33.79■■■■□ 3
CHCHD4-202ENST00000396914 ZSCAN31Q96LW9 406 aaPredicted RBP33.79■■■■□ 3
CHCHD4-202ENST00000396914 DTNBO60941 627 aa33.79■■■■□ 3
CHCHD4-202ENST00000396914 ADCY7P51828 1080 aa33.79■■■■□ 3
CHCHD4-202ENST00000396914 CCDC12Q8WUD4 166 aaPredicted RBP33.79■■■■□ 3
CHCHD4-202ENST00000396914 MCM3APO60318 1980 aa33.78■■■■□ 3
CHCHD4-202ENST00000396914 SMCO2A6NFE2 343 aa33.78■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms