RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 PIGSQ96S52 555 aa20.32■□□□□ 0.84
UPK3A-202ENST00000396082 LRRC2Q9BYS8 371 aa20.32■□□□□ 0.84
UPK3A-202ENST00000396082 PHF24Q9UPV7 400 aa20.32■□□□□ 0.84
UPK3A-202ENST00000396082 ATP11BQ9Y2G3 1177 aa20.32■□□□□ 0.84
UPK3A-202ENST00000396082 BAZ2BQ9UIF8 2168 aaKnown RBP20.31■□□□□ 0.84
UPK3A-202ENST00000396082 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.31■□□□□ 0.84
UPK3A-202ENST00000396082 TRAF1Q13077 416 aa20.31■□□□□ 0.84
UPK3A-202ENST00000396082 KRT32Q14532 448 aa20.31■□□□□ 0.84
UPK3A-202ENST00000396082 SLC39A5Q6ZMH5 540 aa20.31■□□□□ 0.84
UPK3A-202ENST00000396082 DNERQ8NFT8 737 aa20.31■□□□□ 0.84
UPK3A-202ENST00000396082 MORC4Q8TE76 937 aa20.31■□□□□ 0.84
UPK3A-202ENST00000396082 MTMR8Q96EF0 704 aa20.31■□□□□ 0.84
UPK3A-202ENST00000396082 TSEN34Q9BSV6 310 aaKnown RBP20.31■□□□□ 0.84
UPK3A-202ENST00000396082 MAF1Q9H063 256 aa20.31■□□□□ 0.84
UPK3A-202ENST00000396082 RIOX1Q9H6W3 641 aa20.31■□□□□ 0.84
UPK3A-202ENST00000396082 PCDHA1Q9Y5I3 950 aa20.31■□□□□ 0.84
UPK3A-202ENST00000396082 SLC12A7Q9Y666 1083 aa20.31■□□□□ 0.84
UPK3A-202ENST00000396082 REC8O95072 547 aa20.3■□□□□ 0.84
UPK3A-202ENST00000396082 CFBP00751 764 aa20.3■□□□□ 0.84
UPK3A-202ENST00000396082 CALM1P0DP23 149 aa20.3■□□□□ 0.84
UPK3A-202ENST00000396082 CALM2P0DP24 149 aa20.3■□□□□ 0.84
UPK3A-202ENST00000396082 CALM3P0DP25 149 aa20.3■□□□□ 0.84
UPK3A-202ENST00000396082 LIFRP42702 1097 aa20.3■□□□□ 0.84
UPK3A-202ENST00000396082 HABP4Q5JVS0 413 aaKnown RBP20.3■□□□□ 0.84
UPK3A-202ENST00000396082 TLK2Q86UE8 772 aa20.3■□□□□ 0.84
UPK3A-202ENST00000396082 PCSK9Q8NBP7 692 aaKnown RBP20.3■□□□□ 0.84
UPK3A-202ENST00000396082 PIBF1Q8WXW3 757 aa20.3■□□□□ 0.84
UPK3A-202ENST00000396082 MAP3K14Q99558 947 aa20.3■□□□□ 0.84
UPK3A-202ENST00000396082 AP5M1Q9H0R1 490 aa20.3■□□□□ 0.84
UPK3A-202ENST00000396082 PDGFCQ9NRA1 345 aa20.3■□□□□ 0.84
UPK3A-202ENST00000396082 PRKAG2Q9UGJ0 569 aa20.3■□□□□ 0.84
UPK3A-202ENST00000396082 A0A1W2PQ45 241 aaPredicted RBP20.29■□□□□ 0.84
UPK3A-202ENST00000396082 A0A1W2PQY0 241 aa20.29■□□□□ 0.84
UPK3A-202ENST00000396082 MYADML2A6NDP7 307 aa20.29■□□□□ 0.84
UPK3A-202ENST00000396082 MOXD2PA6NHM9 499 aa20.29■□□□□ 0.84
UPK3A-202ENST00000396082 GNAQP50148 359 aa20.29■□□□□ 0.84
UPK3A-202ENST00000396082 ACLYP53396 1101 aa20.29■□□□□ 0.84
UPK3A-202ENST00000396082 GJA9P57773 515 aa20.29■□□□□ 0.84
UPK3A-202ENST00000396082 COL9A3Q14050 684 aaPredicted RBP20.29■□□□□ 0.84
UPK3A-202ENST00000396082 KCNA10Q16322 511 aa20.29■□□□□ 0.84
UPK3A-202ENST00000396082 GNASQ5JWF2 1037 aa20.29■□□□□ 0.84
UPK3A-202ENST00000396082 IQSEC1Q6DN90 963 aa20.29■□□□□ 0.84
UPK3A-202ENST00000396082 SYNE3Q6ZMZ3 975 aa20.29■□□□□ 0.84
UPK3A-202ENST00000396082 RASEFQ8IZ41 740 aa20.29■□□□□ 0.84
UPK3A-202ENST00000396082 KLHDC9Q8NEP7 349 aa20.29■□□□□ 0.84
UPK3A-202ENST00000396082 SYTL5Q8TDW5 730 aaPredicted RBP20.29■□□□□ 0.84
UPK3A-202ENST00000396082 TBC1D5Q92609 795 aa20.29■□□□□ 0.84
UPK3A-202ENST00000396082 UPF3AQ9H1J1 476 aaKnown RBP20.29■□□□□ 0.84
UPK3A-202ENST00000396082 STARD7Q9NQZ5 370 aa20.29■□□□□ 0.84
UPK3A-202ENST00000396082 PNMA6FA0A0J9YX94 578 aa20.28■□□□□ 0.84
UPK3A-202ENST00000396082 CYTH3O43739 400 aa20.28■□□□□ 0.84
UPK3A-202ENST00000396082 PPP1R11O60927 126 aaPredicted RBP20.28■□□□□ 0.84
UPK3A-202ENST00000396082 SMPD1P17405 629 aa20.28■□□□□ 0.84
UPK3A-202ENST00000396082 RXRAP19793 462 aa20.28■□□□□ 0.84
UPK3A-202ENST00000396082 CST5P28325 142 aaPredicted RBP20.28■□□□□ 0.84
UPK3A-202ENST00000396082 SLC35G1Q2M3R5 365 aa20.28■□□□□ 0.84
UPK3A-202ENST00000396082 TRIM60Q495X7 471 aa20.28■□□□□ 0.84
UPK3A-202ENST00000396082 TAPT1Q6NXT6 567 aa20.28■□□□□ 0.84
UPK3A-202ENST00000396082 RAB11FIP4Q86YS3 637 aa20.28■□□□□ 0.84
UPK3A-202ENST00000396082 VTI1AQ96AJ9 217 aa20.28■□□□□ 0.84
UPK3A-202ENST00000396082 TCEANC2Q96MN5 208 aa20.28■□□□□ 0.84
UPK3A-202ENST00000396082 GLT1D1Q96MS3 346 aa20.28■□□□□ 0.84
UPK3A-202ENST00000396082 LZTS2Q9BRK4 669 aa20.28■□□□□ 0.84
UPK3A-202ENST00000396082 SEC63Q9UGP8 760 aaKnown RBP20.28■□□□□ 0.84
UPK3A-202ENST00000396082 DYNC1LI2O43237 492 aaPredicted RBP20.27■□□□□ 0.84
UPK3A-202ENST00000396082 IRX5P78411 483 aaPredicted RBP20.27■□□□□ 0.84
UPK3A-202ENST00000396082 FGD1P98174 961 aa20.27■□□□□ 0.84
UPK3A-202ENST00000396082 SNX17Q15036 470 aa20.27■□□□□ 0.84
UPK3A-202ENST00000396082 ADCK5Q3MIX3 580 aa20.27■□□□□ 0.84
UPK3A-202ENST00000396082 TSGA10IPQ3SY00 556 aa20.27■□□□□ 0.84
UPK3A-202ENST00000396082 DHX32Q7L7V1 743 aaKnown RBP20.27■□□□□ 0.84
UPK3A-202ENST00000396082 MICU3Q86XE3 530 aa20.27■□□□□ 0.84
UPK3A-202ENST00000396082 NSUN6Q8TEA1 469 aaKnown RBP20.27■□□□□ 0.84
UPK3A-202ENST00000396082 RRP36Q96EU6 259 aaKnown RBP20.27■□□□□ 0.84
UPK3A-202ENST00000396082 TAAR1Q96RJ0 339 aa20.27■□□□□ 0.84
UPK3A-202ENST00000396082 RMDN3Q96TC7 470 aa20.27■□□□□ 0.84
UPK3A-202ENST00000396082 SPZ1Q9BXG8 430 aa20.27■□□□□ 0.84
UPK3A-202ENST00000396082 PRDM5Q9NQX1 630 aaPredicted RBP20.27■□□□□ 0.84
UPK3A-202ENST00000396082 RBM27Q9P2N5 1060 aaKnown RBP20.27■□□□□ 0.84
UPK3A-202ENST00000396082 GNEQ9Y223 722 aaKnown RBP20.27■□□□□ 0.84
UPK3A-202ENST00000396082 ASGR1P07306 291 aa20.26■□□□□ 0.83
UPK3A-202ENST00000396082 HMGB1P09429 215 aaKnown RBP20.26■□□□□ 0.83
UPK3A-202ENST00000396082 EDNRBP24530 442 aa20.26■□□□□ 0.83
UPK3A-202ENST00000396082 BEX3Q00994 111 aa20.26■□□□□ 0.83
UPK3A-202ENST00000396082 ARHGEF16Q5VV41 709 aa20.26■□□□□ 0.83
UPK3A-202ENST00000396082 WDR11Q9BZH6 1224 aa20.26■□□□□ 0.83
UPK3A-202ENST00000396082 COL20A1Q9P218 1284 aa20.26■□□□□ 0.83
UPK3A-202ENST00000396082 ZEB2O60315 1214 aa20.25■□□□□ 0.83
UPK3A-202ENST00000396082 PLEKHA8P1O95397 391 aa20.25■□□□□ 0.83
UPK3A-202ENST00000396082 PPP2R5BQ15173 497 aa20.25■□□□□ 0.83
UPK3A-202ENST00000396082 FSCN1Q16658 493 aaKnown RBP20.25■□□□□ 0.83
UPK3A-202ENST00000396082 DUSP28Q4G0W2 176 aa20.25■□□□□ 0.83
UPK3A-202ENST00000396082 C1orf53Q5VUE5 145 aa20.25■□□□□ 0.83
UPK3A-202ENST00000396082 CCSAPQ6IQ19 270 aaPredicted RBP20.25■□□□□ 0.83
UPK3A-202ENST00000396082 SGMS1Q86VZ5 419 aa20.25■□□□□ 0.83
UPK3A-202ENST00000396082 SCFD2Q8WU76 684 aa20.25■□□□□ 0.83
UPK3A-202ENST00000396082 JAKMIP1Q96N16 626 aaKnown RBP20.25■□□□□ 0.83
UPK3A-202ENST00000396082 LBHD1Q9BQE6 289 aaPredicted RBP20.25■□□□□ 0.83
UPK3A-202ENST00000396082 Q9Y3F1 56 aa20.25■□□□□ 0.83
UPK3A-202ENST00000396082 GCOM1H8Y6P7 765 aaPredicted RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms