RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 ZEB2O60315 1214 aa22.64■■□□□ 1.21
COL11A2-204ENST00000395194 GOLGA8HP0CJ92 632 aa22.64■■□□□ 1.21
COL11A2-204ENST00000395194 SDSP20132 328 aa22.64■■□□□ 1.21
COL11A2-204ENST00000395194 PBX2P40425 430 aa22.64■■□□□ 1.21
COL11A2-204ENST00000395194 ZNF543Q08ER8 600 aa22.64■■□□□ 1.21
COL11A2-204ENST00000395194 GRIN2CQ14957 1233 aa22.64■■□□□ 1.21
COL11A2-204ENST00000395194 ZNF365Q70YC5 407 aa22.64■■□□□ 1.21
COL11A2-204ENST00000395194 TRPV6Q9H1D0 765 aa22.64■■□□□ 1.21
COL11A2-204ENST00000395194 CABYRO75952 493 aa22.63■■□□□ 1.21
COL11A2-204ENST00000395194 SMC5Q8IY18 1101 aa22.63■■□□□ 1.21
COL11A2-204ENST00000395194 SLC43A3Q8NBI5 491 aa22.63■■□□□ 1.21
COL11A2-204ENST00000395194 MORC4Q8TE76 937 aa22.63■■□□□ 1.21
COL11A2-204ENST00000395194 CLEC4DQ8WXI8 215 aa22.63■■□□□ 1.21
COL11A2-204ENST00000395194 TIFAQ96CG3 184 aa22.63■■□□□ 1.21
COL11A2-204ENST00000395194 HIPK3Q9H422 1215 aa22.63■■□□□ 1.21
COL11A2-204ENST00000395194 TMEM265A0A087WTH1 108 aa22.62■■□□□ 1.21
COL11A2-204ENST00000395194 B4GALT4O60513 344 aa22.62■■□□□ 1.21
COL11A2-204ENST00000395194 CCL23P55773 120 aa22.62■■□□□ 1.21
COL11A2-204ENST00000395194 USH1GQ495M9 461 aa22.62■■□□□ 1.21
COL11A2-204ENST00000395194 PSRC1Q6PGN9 363 aaPredicted RBP22.62■■□□□ 1.21
COL11A2-204ENST00000395194 CWC27Q6UX04 472 aaKnown RBP22.62■■□□□ 1.21
COL11A2-204ENST00000395194 RNF207Q6ZRF8 634 aa22.62■■□□□ 1.21
COL11A2-204ENST00000395194 CHD1LQ86WJ1 897 aa22.62■■□□□ 1.21
COL11A2-204ENST00000395194 PLEKHM2Q8IWE5 1019 aa22.62■■□□□ 1.21
COL11A2-204ENST00000395194 WDR11Q9BZH6 1224 aa22.62■■□□□ 1.21
COL11A2-204ENST00000395194 RWDD1Q9H446 243 aaPredicted RBP22.62■■□□□ 1.21
COL11A2-204ENST00000395194 SCN5AQ14524 2016 aa22.62■■□□□ 1.21
COL11A2-204ENST00000395194 IGHDP01880 384 aa22.61■■□□□ 1.21
COL11A2-204ENST00000395194 MFAP1P55081 439 aaKnown RBP22.61■■□□□ 1.21
COL11A2-204ENST00000395194 DUSP28Q4G0W2 176 aa22.61■■□□□ 1.21
COL11A2-204ENST00000395194 PPP1R13LQ8WUF5 828 aa22.61■■□□□ 1.21
COL11A2-204ENST00000395194 PBX4Q9BYU1 374 aa22.61■■□□□ 1.21
COL11A2-204ENST00000395194 RNF41Q9H4P4 317 aaPredicted RBP22.61■■□□□ 1.21
COL11A2-204ENST00000395194 ZNF576Q9H609 170 aa22.61■■□□□ 1.21
COL11A2-204ENST00000395194 IL23AQ9NPF7 189 aa22.61■■□□□ 1.21
COL11A2-204ENST00000395194 MYL3P08590 195 aa22.6■■□□□ 1.21
COL11A2-204ENST00000395194 SNHG28P0DPA3 235 aa22.6■■□□□ 1.21
COL11A2-204ENST00000395194 RPS6P62753 249 aaKnown RBP22.6■■□□□ 1.21
COL11A2-204ENST00000395194 OR6J1Q8NGC5 347 aa22.6■■□□□ 1.21
COL11A2-204ENST00000395194 EXOC6Q8TAG9 804 aa22.6■■□□□ 1.21
COL11A2-204ENST00000395194 ESR2Q92731 530 aa22.6■■□□□ 1.21
COL11A2-204ENST00000395194 TTC14Q96N46 770 aa22.6■■□□□ 1.21
COL11A2-204ENST00000395194 UBA5Q9GZZ9 404 aa22.6■■□□□ 1.21
COL11A2-204ENST00000395194 DIAPH3Q9NSV4 1193 aa22.6■■□□□ 1.21
COL11A2-204ENST00000395194 CXXC1Q9P0U4 656 aaPredicted RBP22.6■■□□□ 1.21
COL11A2-204ENST00000395194 Q9Y3F1 56 aa22.6■■□□□ 1.21
COL11A2-204ENST00000395194 SCN10AQ9Y5Y9 1956 aa22.59■■□□□ 1.21
COL11A2-204ENST00000395194 CHD9Q3L8U1 2897 aa22.59■■□□□ 1.21
COL11A2-204ENST00000395194 ZNF213O14771 459 aa22.59■■□□□ 1.21
COL11A2-204ENST00000395194 KDM4AO75164 1064 aa22.59■■□□□ 1.21
COL11A2-204ENST00000395194 PCP11498 1178 aaKnown RBP22.59■■□□□ 1.21
COL11A2-204ENST00000395194 PDE4DQ08499 809 aa22.59■■□□□ 1.21
COL11A2-204ENST00000395194 RASIP1Q5U651 963 aa22.59■■□□□ 1.21
COL11A2-204ENST00000395194 TICAM2Q86XR7 235 aa22.59■■□□□ 1.21
COL11A2-204ENST00000395194 NOC4LQ9BVI4 516 aaKnown RBP22.59■■□□□ 1.21
COL11A2-204ENST00000395194 WNT8AQ9H1J5 351 aa22.59■■□□□ 1.21
COL11A2-204ENST00000395194 B4E1Z4 1266 aa22.58■■□□□ 1.21
COL11A2-204ENST00000395194 NUCB1Q02818 461 aa22.58■■□□□ 1.21
COL11A2-204ENST00000395194 OTOP2Q7RTS6 562 aa22.58■■□□□ 1.21
COL11A2-204ENST00000395194 COPS5Q92905 334 aa22.58■■□□□ 1.21
COL11A2-204ENST00000395194 SCLYQ96I15 445 aa22.58■■□□□ 1.21
COL11A2-204ENST00000395194 TRMT13Q9NUP7 481 aaKnown RBP22.58■■□□□ 1.21
COL11A2-204ENST00000395194 SPTBN5Q9NRC6 3674 aaKnown RBP22.58■■□□□ 1.21
COL11A2-204ENST00000395194 WDR19Q8NEZ3 1342 aa22.57■■□□□ 1.2
COL11A2-204ENST00000395194 PPP2R5BQ15173 497 aa22.57■■□□□ 1.2
COL11A2-204ENST00000395194 USP38Q8NB14 1042 aa22.57■■□□□ 1.2
COL11A2-204ENST00000395194 PNMA1Q8ND90 353 aa22.57■■□□□ 1.2
COL11A2-204ENST00000395194 ALDH8A1Q9H2A2 487 aaPredicted RBP22.57■■□□□ 1.2
COL11A2-204ENST00000395194 TTC28Q96AY4 2481 aa22.57■■□□□ 1.2
COL11A2-204ENST00000395194 TRIP12Q14669 1992 aaPredicted RBP22.56■■□□□ 1.2
COL11A2-204ENST00000395194 FGBP02675 491 aa22.56■■□□□ 1.2
COL11A2-204ENST00000395194 CYP2C9P11712 490 aa22.56■■□□□ 1.2
COL11A2-204ENST00000395194 CPT1AP50416 773 aa22.56■■□□□ 1.2
COL11A2-204ENST00000395194 PURAQ00577 322 aaKnown RBP22.56■■□□□ 1.2
COL11A2-204ENST00000395194 CDC37Q16543 378 aaPredicted RBP22.56■■□□□ 1.2
COL11A2-204ENST00000395194 FAM47CQ5HY64 1035 aa22.56■■□□□ 1.2
COL11A2-204ENST00000395194 GPATCH4Q5T3I0 446 aaKnown RBP22.56■■□□□ 1.2
COL11A2-204ENST00000395194 HERVK_113Q902F9 699 aa22.56■■□□□ 1.2
COL11A2-204ENST00000395194 OSBPL3Q9H4L5 887 aa22.56■■□□□ 1.2
COL11A2-204ENST00000395194 POLR3EQ9NVU0 708 aa22.56■■□□□ 1.2
COL11A2-204ENST00000395194 KIAA1217Q5T5P2 1943 aa22.56■■□□□ 1.2
COL11A2-204ENST00000395194 RBM47A0AV96 593 aaKnown RBP22.55■■□□□ 1.2
COL11A2-204ENST00000395194 AAMPQ13685 434 aa22.55■■□□□ 1.2
COL11A2-204ENST00000395194 IQCA1Q86XH1 822 aa22.55■■□□□ 1.2
COL11A2-204ENST00000395194 TBC1D5Q92609 795 aa22.55■■□□□ 1.2
COL11A2-204ENST00000395194 PRDM12Q9H4Q4 367 aa22.55■■□□□ 1.2
COL11A2-204ENST00000395194 KAT14Q9H8E8 782 aa22.55■■□□□ 1.2
COL11A2-204ENST00000395194 GPHNQ9NQX3 736 aaPredicted RBP22.55■■□□□ 1.2
COL11A2-204ENST00000395194 PNMA2Q9UL42 364 aa22.55■■□□□ 1.2
COL11A2-204ENST00000395194 CHD7Q9P2D1 2997 aa22.55■■□□□ 1.2
COL11A2-204ENST00000395194 LOC102724159A0A0B4J2E5 919 aa22.54■■□□□ 1.2
COL11A2-204ENST00000395194 DHX16O60231 1041 aaKnown RBP22.54■■□□□ 1.2
COL11A2-204ENST00000395194 EDNRBP24530 442 aa22.54■■□□□ 1.2
COL11A2-204ENST00000395194 CHMP4BP1P59074 171 aa22.54■■□□□ 1.2
COL11A2-204ENST00000395194 PWP2Q15269 919 aaKnown RBP22.54■■□□□ 1.2
COL11A2-204ENST00000395194 DGKHQ86XP1 1220 aa22.54■■□□□ 1.2
COL11A2-204ENST00000395194 SCFD2Q8WU76 684 aa22.54■■□□□ 1.2
COL11A2-204ENST00000395194 PPM1EQ8WY54 764 aa22.54■■□□□ 1.2
COL11A2-204ENST00000395194 MPHOSPH6Q99547 160 aaKnown RBP22.54■■□□□ 1.2
COL11A2-204ENST00000395194 MTG1Q9BT17 334 aaPredicted RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms