RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 FAM205AQ6ZU69 1335 aa18.14■□□□□ 0.49
PHTF1-205ENST00000393357 RASSF10A6NK89 507 aa18.14■□□□□ 0.49
PHTF1-205ENST00000393357 ADSSL1Q8N142 457 aa18.14■□□□□ 0.49
PHTF1-205ENST00000393357 TRIM58Q8NG06 486 aa18.14■□□□□ 0.49
PHTF1-205ENST00000393357 MDM1Q8TC05 714 aa18.14■□□□□ 0.49
PHTF1-205ENST00000393357 HYOU1Q9Y4L1 999 aa18.14■□□□□ 0.49
PHTF1-205ENST00000393357 TECP42680 631 aa18.13■□□□□ 0.49
PHTF1-205ENST00000393357 CACNB1Q02641 598 aaPredicted RBP18.13■□□□□ 0.49
PHTF1-205ENST00000393357 GJA10Q969M2 543 aa18.13■□□□□ 0.49
PHTF1-205ENST00000393357 DNAJC7Q99615 494 aa18.13■□□□□ 0.49
PHTF1-205ENST00000393357 DPH5Q9H2P9 285 aa18.13■□□□□ 0.49
PHTF1-205ENST00000393357 RMND1Q9NWS8 449 aa18.13■□□□□ 0.49
PHTF1-205ENST00000393357 MEGF6O75095 1541 aa18.13■□□□□ 0.49
PHTF1-205ENST00000393357 UPP2O95045 317 aa18.13■□□□□ 0.49
PHTF1-205ENST00000393357 MYBL1P10243 752 aa18.13■□□□□ 0.49
PHTF1-205ENST00000393357 CCDC24Q8N4L8 307 aa18.13■□□□□ 0.49
PHTF1-205ENST00000393357 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.13■□□□□ 0.49
PHTF1-205ENST00000393357 TARSL2A2RTX5 802 aaKnown RBP18.13■□□□□ 0.49
PHTF1-205ENST00000393357 TSPY2A6NKD2 308 aa18.13■□□□□ 0.49
PHTF1-205ENST00000393357 CLNS1AP54105 237 aaKnown RBP18.13■□□□□ 0.49
PHTF1-205ENST00000393357 CTSWP56202 376 aa18.13■□□□□ 0.49
PHTF1-205ENST00000393357 ATP2C1P98194 919 aaPredicted RBP18.13■□□□□ 0.49
PHTF1-205ENST00000393357 GLIS3Q8NEA6 775 aa18.13■□□□□ 0.49
PHTF1-205ENST00000393357 NLRP3Q96P20 1036 aa18.13■□□□□ 0.49
PHTF1-205ENST00000393357 TACO1Q9BSH4 297 aaKnown RBP18.13■□□□□ 0.49
PHTF1-205ENST00000393357 RNF26Q9BY78 433 aaPredicted RBP18.13■□□□□ 0.49
PHTF1-205ENST00000393357 STK36Q9NRP7 1315 aa18.12■□□□□ 0.49
PHTF1-205ENST00000393357 BUB1BO60566 1050 aaPredicted RBP18.12■□□□□ 0.49
PHTF1-205ENST00000393357 SHOX2O60902 331 aaPredicted RBP18.12■□□□□ 0.49
PHTF1-205ENST00000393357 PALMO75781 387 aa18.12■□□□□ 0.49
PHTF1-205ENST00000393357 PRPF4BQ13523 1007 aaKnown RBP18.12■□□□□ 0.49
PHTF1-205ENST00000393357 QPCTQ16769 361 aa18.12■□□□□ 0.49
PHTF1-205ENST00000393357 STAG2Q8N3U4 1231 aa18.12■□□□□ 0.49
PHTF1-205ENST00000393357 SLC40A1Q9NP59 571 aa18.12■□□□□ 0.49
PHTF1-205ENST00000393357 DCDC2CA8MYV0 355 aa18.12■□□□□ 0.49
PHTF1-205ENST00000393357 PPP1R37O75864 691 aa18.12■□□□□ 0.49
PHTF1-205ENST00000393357 PLCG1P19174 1290 aa18.12■□□□□ 0.49
PHTF1-205ENST00000393357 GBP2P32456 591 aaPredicted RBP18.12■□□□□ 0.49
PHTF1-205ENST00000393357 CPLX4Q7Z7G2 160 aa18.12■□□□□ 0.49
PHTF1-205ENST00000393357 ZBTB38Q8NAP3 1195 aaPredicted RBP18.12■□□□□ 0.49
PHTF1-205ENST00000393357 MYCBPAPQ8TBZ2 947 aa18.12■□□□□ 0.49
PHTF1-205ENST00000393357 TCP11Q8WWU5 503 aa18.12■□□□□ 0.49
PHTF1-205ENST00000393357 PACSIN1Q9BY11 444 aa18.12■□□□□ 0.49
PHTF1-205ENST00000393357 DISC1Q9NRI5 854 aa18.12■□□□□ 0.49
PHTF1-205ENST00000393357 STX8Q9UNK0 236 aa18.12■□□□□ 0.49
PHTF1-205ENST00000393357 ARHGAP23Q9P227 1491 aa18.12■□□□□ 0.49
PHTF1-205ENST00000393357 LRRC10BA6NIK2 292 aa18.11■□□□□ 0.49
PHTF1-205ENST00000393357 KCNK3O14649 394 aa18.11■□□□□ 0.49
PHTF1-205ENST00000393357 SLC5A1P13866 664 aa18.11■□□□□ 0.49
PHTF1-205ENST00000393357 ZBED6P86452 979 aa18.11■□□□□ 0.49
PHTF1-205ENST00000393357 RPAINQ86UA6 219 aa18.11■□□□□ 0.49
PHTF1-205ENST00000393357 ZCRB1Q8TBF4 217 aaKnown RBP18.11■□□□□ 0.49
PHTF1-205ENST00000393357 LRRC15Q8TF66 581 aa18.11■□□□□ 0.49
PHTF1-205ENST00000393357 KDM3BQ7LBC6 1761 aa18.11■□□□□ 0.49
PHTF1-205ENST00000393357 NWD2Q9ULI1 1742 aa18.11■□□□□ 0.49
PHTF1-205ENST00000393357 MAGEB6P1A0A0J9YX57 407 aa18.11■□□□□ 0.49
PHTF1-205ENST00000393357 CPP00450 1065 aa18.11■□□□□ 0.49
PHTF1-205ENST00000393357 TAX1BP1Q86VP1 789 aa18.11■□□□□ 0.49
PHTF1-205ENST00000393357 NELFCDQ8IXH7 590 aa18.11■□□□□ 0.49
PHTF1-205ENST00000393357 NOVA2Q9UNW9 492 aaKnown RBP18.11■□□□□ 0.49
PHTF1-205ENST00000393357 SEMA3EO15041 775 aa18.11■□□□□ 0.49
PHTF1-205ENST00000393357 CLTAP09496 248 aa18.11■□□□□ 0.49
PHTF1-205ENST00000393357 TXKP42681 527 aa18.11■□□□□ 0.49
PHTF1-205ENST00000393357 RAPGEF1Q13905 1077 aa18.11■□□□□ 0.49
PHTF1-205ENST00000393357 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.11■□□□□ 0.49
PHTF1-205ENST00000393357 CASKIN2Q8WXE0 1202 aa18.11■□□□□ 0.49
PHTF1-205ENST00000393357 SH3GL2Q99962 352 aa18.11■□□□□ 0.49
PHTF1-205ENST00000393357 RNF41Q9H4P4 317 aaPredicted RBP18.11■□□□□ 0.49
PHTF1-205ENST00000393357 ADAMTS1Q9UHI8 967 aa18.11■□□□□ 0.49
PHTF1-205ENST00000393357 LTN1O94822 1766 aa18.11■□□□□ 0.49
PHTF1-205ENST00000393357 CEP104O60308 925 aa18.1■□□□□ 0.49
PHTF1-205ENST00000393357 CTNNA1P35221 906 aaKnown RBP18.1■□□□□ 0.49
PHTF1-205ENST00000393357 COPB2P35606 906 aa18.1■□□□□ 0.49
PHTF1-205ENST00000393357 PUM3Q15397 648 aaKnown RBP18.1■□□□□ 0.49
PHTF1-205ENST00000393357 IFT20Q8IY31 132 aa18.1■□□□□ 0.49
PHTF1-205ENST00000393357 THOC1Q96FV9 657 aaKnown RBP18.1■□□□□ 0.49
PHTF1-205ENST00000393357 DUSP9Q99956 384 aaKnown RBP18.1■□□□□ 0.49
PHTF1-205ENST00000393357 PRDM11Q9NQV5 511 aa18.1■□□□□ 0.49
PHTF1-205ENST00000393357 NAALADL2Q58DX5 795 aa18.1■□□□□ 0.49
PHTF1-205ENST00000393357 ZNF507Q8TCN5 953 aa18.1■□□□□ 0.49
PHTF1-205ENST00000393357 RPGRIP1Q96KN7 1286 aa18.1■□□□□ 0.49
PHTF1-205ENST00000393357 SH2D4AQ9H788 454 aa18.1■□□□□ 0.49
PHTF1-205ENST00000393357 WDR19Q8NEZ3 1342 aa18.1■□□□□ 0.49
PHTF1-205ENST00000393357 MST1RQ04912 1400 aa18.1■□□□□ 0.49
PHTF1-205ENST00000393357 MRC1P22897 1456 aa18.1■□□□□ 0.49
PHTF1-205ENST00000393357 CCNT1O60563 726 aaKnown RBP18.1■□□□□ 0.49
PHTF1-205ENST00000393357 SRGNP10124 158 aa18.1■□□□□ 0.49
PHTF1-205ENST00000393357 IFNAR2P48551 515 aa18.1■□□□□ 0.49
PHTF1-205ENST00000393357 PPP1R7Q15435 360 aa18.1■□□□□ 0.49
PHTF1-205ENST00000393357 PTGISQ16647 500 aa18.1■□□□□ 0.49
PHTF1-205ENST00000393357 MAEAQ7L5Y9 396 aa18.1■□□□□ 0.49
PHTF1-205ENST00000393357 TMTC2Q8N394 836 aa18.1■□□□□ 0.49
PHTF1-205ENST00000393357 PRPF38AQ8NAV1 312 aaKnown RBP18.1■□□□□ 0.49
PHTF1-205ENST00000393357 SELENOSQ9BQE4 189 aa18.1■□□□□ 0.49
PHTF1-205ENST00000393357 TLR10Q9BXR5 811 aa18.1■□□□□ 0.49
PHTF1-205ENST00000393357 DDX47Q9H0S4 455 aaKnown RBP18.1■□□□□ 0.49
PHTF1-205ENST00000393357 SCG2P13521 617 aa18.09■□□□□ 0.49
PHTF1-205ENST00000393357 CFAP221Q4G0U5 840 aa18.09■□□□□ 0.49
PHTF1-205ENST00000393357 CNPY4Q8N129 248 aa18.09■□□□□ 0.49
PHTF1-205ENST00000393357 P2RX5Q93086 422 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms