RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 ZSCAN10Q96SZ4 725 aaPredicted RBP10.18□□□□□ -0.78
LIMCH1-202ENST00000381753 TBC1D2Q9BYX2 928 aa10.18□□□□□ -0.78
LIMCH1-202ENST00000381753 GTPBP4Q9BZE4 634 aaKnown RBP10.18□□□□□ -0.78
LIMCH1-202ENST00000381753 DISC1Q9NRI5 854 aa10.18□□□□□ -0.78
LIMCH1-202ENST00000381753 LSM7Q9UK45 103 aaKnown RBP10.18□□□□□ -0.78
LIMCH1-202ENST00000381753 PRPHP41219 470 aa10.17□□□□□ -0.78
LIMCH1-202ENST00000381753 DYNLL1P63167 89 aaKnown RBP10.17□□□□□ -0.78
LIMCH1-202ENST00000381753 SCYL2Q6P3W7 929 aa10.17□□□□□ -0.78
LIMCH1-202ENST00000381753 ARMCX2Q7L311 632 aa10.17□□□□□ -0.78
LIMCH1-202ENST00000381753 IL17REQ8NFR9 667 aa10.17□□□□□ -0.78
LIMCH1-202ENST00000381753 CYP27B1O15528 508 aa10.17□□□□□ -0.78
LIMCH1-202ENST00000381753 HOXA2O43364 376 aa10.17□□□□□ -0.78
LIMCH1-202ENST00000381753 FBXW10Q5XX13 1052 aa10.17□□□□□ -0.78
LIMCH1-202ENST00000381753 PPP1R21Q6ZMI0 780 aa10.17□□□□□ -0.78
LIMCH1-202ENST00000381753 RNF214Q8ND24 703 aa10.17□□□□□ -0.78
LIMCH1-202ENST00000381753 CELF1Q92879 486 aaKnown RBP10.17□□□□□ -0.78
LIMCH1-202ENST00000381753 LRRC4Q9HBW1 653 aa10.17□□□□□ -0.78
LIMCH1-202ENST00000381753 NMRK2Q9NPI5 230 aa10.17□□□□□ -0.78
LIMCH1-202ENST00000381753 F8W8V4 182 aa10.17□□□□□ -0.78
LIMCH1-202ENST00000381753 CYP4A11Q02928 519 aa10.17□□□□□ -0.78
LIMCH1-202ENST00000381753 DPYDQ12882 1025 aa10.17□□□□□ -0.78
LIMCH1-202ENST00000381753 ARHGAP45Q92619 1136 aa10.17□□□□□ -0.78
LIMCH1-202ENST00000381753 SCAND2PQ9GZW5 306 aaPredicted RBP10.17□□□□□ -0.78
LIMCH1-202ENST00000381753 TBC1D7Q9P0N9 293 aa10.17□□□□□ -0.78
LIMCH1-202ENST00000381753 ASXL1Q8IXJ9 1541 aa10.17□□□□□ -0.78
LIMCH1-202ENST00000381753 CYP2E1P05181 493 aaPredicted RBP10.17□□□□□ -0.78
LIMCH1-202ENST00000381753 MYBP10242 640 aa10.17□□□□□ -0.78
LIMCH1-202ENST00000381753 CAMK4Q16566 473 aa10.17□□□□□ -0.78
LIMCH1-202ENST00000381753 MTRQ99707 1265 aa10.17□□□□□ -0.78
LIMCH1-202ENST00000381753 GOLGA8CPA6NN73 597 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 PLSCR1O15162 318 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 EGFRP00533 1210 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 MCM4P33991 863 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 PDZD4Q76G19 769 aaPredicted RBP10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 FMNL3Q8IVF7 1028 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 SIX6OS1Q8N1H7 587 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 CDCA5Q96FF9 252 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 CHMP6Q96FZ7 201 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 SAMD9LQ8IVG5 1584 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 HNRNPDLO14979 420 aaKnown RBP10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 SLC4A1P02730 911 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 ACADMP11310 421 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 TERF1P54274 439 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 FBXW4P57775 412 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 MECOMQ03112 1051 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 BTG3Q14201 252 aaPredicted RBP10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 TMEM132BQ14DG7 1078 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 POMGNT1Q8WZA1 660 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 YIPF2Q9BWQ6 316 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 DDX25Q9UHL0 483 aaKnown RBP10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 PDE6AP16499 860 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 LACTBP83111 547 aaPredicted RBP10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 HS6ST3Q8IZP7 471 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 CCDC63Q8NA47 563 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 FAM149B1Q96BN6 582 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 MIS12Q9H081 205 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 MINPP1Q9UNW1 487 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 GLTPD2A6NH11 291 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 FSTL1Q12841 308 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 NBPF9Q3BBW0 867 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 RGL4Q8IZJ4 473 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 SERTAD1Q9UHV2 236 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 KDM3AQ9Y4C1 1321 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 URODP06132 367 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 DLATP10515 647 aaKnown RBP10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 MYL7Q01449 175 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 TSPYL6Q8N831 410 aa10.16□□□□□ -0.78
LIMCH1-202ENST00000381753 GOLGA6L7A0A1B0GV03 622 aa10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 SDSP20132 328 aa10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 ATICP31939 592 aa10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 CDC37Q16543 378 aaPredicted RBP10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 DGKDQ16760 1214 aa10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 DDX12PQ92771 950 aa10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 IQCGQ9H095 443 aaKnown RBP10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 NT5C3AQ9H0P0 336 aa10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 XPNPEP3Q9NQH7 507 aa10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 KMT5AQ9NQR1 393 aa10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 DBR1Q9UK59 544 aaKnown RBP10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 ERCC6L2Q5T890 1561 aa10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 C17orf102A2RUQ5 167 aa10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 BIN1O00499 593 aa10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 AKR1B10O60218 316 aa10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 SP100P23497 879 aaPredicted RBP10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 GJB2P29033 226 aa10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 OR1G1P47890 313 aa10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 CCDC15Q0P6D6 951 aa10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 SEPT2Q15019 361 aa10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 KIAA0753Q2KHM9 967 aa10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 ACSF2Q96CM8 615 aaPredicted RBP10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 INCENPQ9NQS7 918 aa10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 PIN4Q9Y237 131 aaKnown RBP10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 KDRP35968 1356 aa10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 PALM2Q8IXS6 379 aa10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 DYDC1Q8WWB3 177 aa10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 TSPY26PQ9H489 355 aa10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 AXIN2Q9Y2T1 843 aa10.15□□□□□ -0.78
LIMCH1-202ENST00000381753 hCG_1642624A0A1W2PR95 340 aa10.15□□□□□ -0.79
LIMCH1-202ENST00000381753 K7ELQ4 463 aaPredicted RBP10.15□□□□□ -0.79
LIMCH1-202ENST00000381753 SYKP43405 635 aa10.15□□□□□ -0.79
LIMCH1-202ENST00000381753 TFAMQ00059 246 aaKnown RBP10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms