RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 PHEXP78562 749 aa18.62■□□□□ 0.57
COL4A3BP-203ENST00000380494 KRT81Q14533 505 aa18.62■□□□□ 0.57
COL4A3BP-203ENST00000380494 CADPS2Q86UW7 1296 aa18.62■□□□□ 0.57
COL4A3BP-203ENST00000380494 MFAP3LO75121 409 aa18.62■□□□□ 0.57
COL4A3BP-203ENST00000380494 MOCS3O95396 460 aa18.62■□□□□ 0.57
COL4A3BP-203ENST00000380494 ADCK5Q3MIX3 580 aa18.62■□□□□ 0.57
COL4A3BP-203ENST00000380494 FAM26FQ5R3K3 315 aa18.62■□□□□ 0.57
COL4A3BP-203ENST00000380494 EFHD1Q9BUP0 239 aa18.62■□□□□ 0.57
COL4A3BP-203ENST00000380494 SH3TC1Q8TE82 1336 aa18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 RASGRF2O14827 1237 aa18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 ADD1P35611 737 aaKnown RBP18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 PTGDRQ13258 359 aa18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 OSBPL5Q9H0X9 879 aaPredicted RBP18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 TRPC6Q9Y210 931 aa18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 ADGBQ8N7X0 1667 aa18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 SERPING1P05155 500 aa18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 ABTB1Q969K4 478 aaPredicted RBP18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 ZC3H12CQ9C0D7 883 aaKnown RBP18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 ZMYND12Q9H0C1 365 aa18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 BIN2Q9UBW5 565 aaPredicted RBP18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 STK17AQ9UEE5 414 aa18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 KIAA0556O60303 1618 aa18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 KIF23Q02241 960 aaPredicted RBP18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 ASPHQ12797 758 aa18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 DRP2Q13474 957 aa18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 SLC39A2Q9NP94 309 aa18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 PKD2L1Q9P0L9 805 aa18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 PACSIN2Q9UNF0 486 aaPredicted RBP18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 COL4A3BPQ9Y5P4 624 aa18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 NDUFB9Q9Y6M9 179 aa18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 SCINQ9Y6U3 715 aa18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 KDM5CP41229 1560 aa18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 ANO9A1A5B4 782 aa18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 KIF11P52732 1056 aa18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 PDZD8Q8NEN9 1154 aa18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 SLC52A2Q9HAB3 445 aa18.61■□□□□ 0.57
COL4A3BP-203ENST00000380494 ARHGAP18Q8N392 663 aa18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 NSMCE1Q8WV22 266 aa18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 EAF2Q96CJ1 260 aaPredicted RBP18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 AATFQ9NY61 560 aaKnown RBP eCLIP18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 CLASP1Q7Z460 1538 aa18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 MMEL1Q495T6 779 aa18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 TEX2Q8IWB9 1127 aa18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 C1orf112Q9NSG2 853 aa18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 SOS2Q07890 1332 aaPredicted RBP18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 MYOM2P54296 1465 aa18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 CYP2J2P51589 502 aa18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 PLTPP55058 493 aa18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 TMED1Q13445 227 aa18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 CCDC68Q9H2F9 335 aa18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 XAB2Q9HCS7 855 aaKnown RBP18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 ZNF148Q9UQR1 794 aa18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 H0YCG3 227 aa18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 ADAT2Q7Z6V5 191 aaKnown RBP18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 ZMAT2Q96NC0 199 aaKnown RBP18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 ZNF219Q9P2Y4 722 aaPredicted RBP18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 POC1B-GALNT4F8VUJ3 575 aa18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 CCDC188H7C350 402 aa18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 CSRNP1Q96S65 589 aa18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 FMO2Q99518 471 aa18.6■□□□□ 0.57
COL4A3BP-203ENST00000380494 RCN2Q14257 317 aa18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 RBM17Q96I25 401 aaKnown RBP18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 RNF26Q9BY78 433 aaPredicted RBP18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 ANAPC5Q9UJX4 755 aa18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 CD19P15391 556 aa18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 TFAP4Q01664 338 aa18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 RINT1Q6NUQ1 792 aa18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 TMOD4Q9NZQ9 345 aa18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 PLAAQ9Y263 795 aa18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 CFAP73A6NFT4 308 aa18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 ATF7P17544 494 aaPredicted RBP18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 BPIFB4P59827 614 aa18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 TMED2Q15363 201 aa18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 AOC3Q16853 763 aa18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 PARP9Q8IXQ6 854 aa18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 ANKRD13CQ8N6S4 541 aa18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 CXorf38Q8TB03 319 aa18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 NSFL1CQ9UNZ2 370 aaKnown RBP18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 PTPN22Q9Y2R2 807 aa18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 VPS41P49754 854 aa18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 CCDC117Q8IWD4 279 aaPredicted RBP18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 CALR3Q96L12 384 aaKnown RBP18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 YY1AP1Q9H869 796 aa18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 GPR108Q9NPR9 543 aa18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 AFG3L2Q9Y4W6 797 aa18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 CD2APQ9Y5K6 639 aa18.59■□□□□ 0.57
COL4A3BP-203ENST00000380494 AFPP02771 609 aaKnown RBP18.58■□□□□ 0.57
COL4A3BP-203ENST00000380494 SERPINI1Q99574 410 aa18.58■□□□□ 0.57
COL4A3BP-203ENST00000380494 IFT122Q9HBG6 1241 aa18.58■□□□□ 0.57
COL4A3BP-203ENST00000380494 hCG_1642624A0A1W2PR95 340 aa18.58■□□□□ 0.57
COL4A3BP-203ENST00000380494 MFAP3P55082 362 aa18.58■□□□□ 0.57
COL4A3BP-203ENST00000380494 MYL7Q01449 175 aa18.58■□□□□ 0.57
COL4A3BP-203ENST00000380494 PDZD4Q76G19 769 aaPredicted RBP18.58■□□□□ 0.57
COL4A3BP-203ENST00000380494 TBC1D1Q86TI0 1168 aaPredicted RBP18.58■□□□□ 0.57
COL4A3BP-203ENST00000380494 SPDL1Q96EA4 605 aa18.58■□□□□ 0.57
COL4A3BP-203ENST00000380494 FAM81BQ96LP2 452 aa18.58■□□□□ 0.57
COL4A3BP-203ENST00000380494 SH3GL3Q99963 347 aa18.58■□□□□ 0.57
COL4A3BP-203ENST00000380494 PHF23Q9BUL5 403 aaPredicted RBP18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms