RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 CIB2O75838 187 aa14.95□□□□□ -0.02
GPC6-201ENST00000377047 BRD1O95696 1058 aa14.95□□□□□ -0.02
GPC6-201ENST00000377047 IFNB1P01574 187 aa14.95□□□□□ -0.02
GPC6-201ENST00000377047 CMA1P23946 247 aa14.95□□□□□ -0.02
GPC6-201ENST00000377047 TARBP1Q13395 1621 aaKnown RBP14.94□□□□□ -0.02
GPC6-201ENST00000377047 CDC42BPGQ6DT37 1551 aa14.94□□□□□ -0.02
GPC6-201ENST00000377047 MYL7Q01449 175 aa14.94□□□□□ -0.02
GPC6-201ENST00000377047 ERO1AQ96HE7 468 aa14.94□□□□□ -0.02
GPC6-201ENST00000377047 ANKRD36BP1Q96IX9 119 aa14.94□□□□□ -0.02
GPC6-201ENST00000377047 JPH2Q9BR39 696 aaPredicted RBP14.94□□□□□ -0.02
GPC6-201ENST00000377047 KMT5AQ9NQR1 393 aa14.94□□□□□ -0.02
GPC6-201ENST00000377047 LMBRD1Q9NUN5 540 aa14.94□□□□□ -0.02
GPC6-201ENST00000377047 BSDC1Q9NW68 430 aaPredicted RBP14.94□□□□□ -0.02
GPC6-201ENST00000377047 KRT15P19012 456 aa14.94□□□□□ -0.02
GPC6-201ENST00000377047 PPP1R16BQ96T49 567 aa14.94□□□□□ -0.02
GPC6-201ENST00000377047 METTL14Q9HCE5 456 aaKnown RBP14.94□□□□□ -0.02
GPC6-201ENST00000377047 ZWINTO95229 277 aa14.94□□□□□ -0.02
GPC6-201ENST00000377047 USP17L2Q6R6M4 530 aa14.94□□□□□ -0.02
GPC6-201ENST00000377047 C4orf50Q6ZRC1 276 aa14.94□□□□□ -0.02
GPC6-201ENST00000377047 NME8Q8N427 588 aa14.94□□□□□ -0.02
GPC6-201ENST00000377047 PUS7LQ9H0K6 701 aaKnown RBP14.94□□□□□ -0.02
GPC6-201ENST00000377047 ZNF277Q9NRM2 450 aaPredicted RBP14.94□□□□□ -0.02
GPC6-201ENST00000377047 ATG3Q9NT62 314 aa14.94□□□□□ -0.02
GPC6-201ENST00000377047 MKRN1Q9UHC7 482 aaKnown RBP14.94□□□□□ -0.02
GPC6-201ENST00000377047 CYP2D7A0A087X1C5 515 aa14.94□□□□□ -0.02
GPC6-201ENST00000377047 RPS6KA4O75676 772 aa14.94□□□□□ -0.02
GPC6-201ENST00000377047 ZSCAN20P17040 1043 aaPredicted RBP14.94□□□□□ -0.02
GPC6-201ENST00000377047 SNAP25P60880 206 aa14.94□□□□□ -0.02
GPC6-201ENST00000377047 APOA5Q6Q788 366 aa14.94□□□□□ -0.02
GPC6-201ENST00000377047 MIS12Q9H081 205 aa14.94□□□□□ -0.02
GPC6-201ENST00000377047 PCDHA7Q9UN72 937 aa14.94□□□□□ -0.02
GPC6-201ENST00000377047 SPATA31A3Q5VYP0 1347 aa14.93□□□□□ -0.02
GPC6-201ENST00000377047 CHD1O14646 1710 aa14.93□□□□□ -0.02
GPC6-201ENST00000377047 MICALL1Q8N3F8 863 aa14.93□□□□□ -0.02
GPC6-201ENST00000377047 MAP4K1Q92918 833 aa14.93□□□□□ -0.02
GPC6-201ENST00000377047 TBCKQ8TEA7 893 aa14.93□□□□□ -0.02
GPC6-201ENST00000377047 CEP170P1Q96L14 293 aa14.93□□□□□ -0.02
GPC6-201ENST00000377047 RNF26Q9BY78 433 aaPredicted RBP14.93□□□□□ -0.02
GPC6-201ENST00000377047 ZNF341Q9BYN7 854 aa14.93□□□□□ -0.02
GPC6-201ENST00000377047 PCDHB4Q9Y5E5 795 aa14.93□□□□□ -0.02
GPC6-201ENST00000377047 MAP3K4Q9Y6R4 1608 aa14.93□□□□□ -0.02
GPC6-201ENST00000377047 ZBTB7AO95365 584 aa14.93□□□□□ -0.02
GPC6-201ENST00000377047 NDUFA8P51970 172 aa14.93□□□□□ -0.02
GPC6-201ENST00000377047 METTL23Q86XA0 190 aa14.93□□□□□ -0.02
GPC6-201ENST00000377047 OR8K1Q8NGG5 319 aa14.93□□□□□ -0.02
GPC6-201ENST00000377047 MTMR6Q9Y217 621 aa14.93□□□□□ -0.02
GPC6-201ENST00000377047 BUB1O43683 1085 aa14.93□□□□□ -0.02
GPC6-201ENST00000377047 ADCK5Q3MIX3 580 aa14.93□□□□□ -0.02
GPC6-201ENST00000377047 PDZD4Q76G19 769 aaPredicted RBP14.93□□□□□ -0.02
GPC6-201ENST00000377047 ADGRL3Q9HAR2 1447 aa14.93□□□□□ -0.02
GPC6-201ENST00000377047 LAD1O00515 517 aa14.93□□□□□ -0.02
GPC6-201ENST00000377047 SARNPP82979 210 aaKnown RBP14.93□□□□□ -0.02
GPC6-201ENST00000377047 CTAGE3PQ8IX95 158 aa14.93□□□□□ -0.02
GPC6-201ENST00000377047 PALM2Q8IXS6 379 aa14.93□□□□□ -0.02
GPC6-201ENST00000377047 PI4K2BQ8TCG2 481 aa14.93□□□□□ -0.02
GPC6-201ENST00000377047 LARP4BQ92615 738 aaKnown RBP14.93□□□□□ -0.02
GPC6-201ENST00000377047 WDR11Q9BZH6 1224 aa14.93□□□□□ -0.02
GPC6-201ENST00000377047 CACNB1Q02641 598 aaPredicted RBP14.92□□□□□ -0.02
GPC6-201ENST00000377047 PAK2Q13177 524 aa14.92□□□□□ -0.02
GPC6-201ENST00000377047 HLFQ16534 295 aa14.92□□□□□ -0.02
GPC6-201ENST00000377047 AOC3Q16853 763 aa14.92□□□□□ -0.02
GPC6-201ENST00000377047 MEIS1O00470 390 aa14.92□□□□□ -0.02
GPC6-201ENST00000377047 KCNK3O14649 394 aa14.92□□□□□ -0.02
GPC6-201ENST00000377047 COBLO75128 1261 aa14.92□□□□□ -0.02
GPC6-201ENST00000377047 ZNF215Q9UL58 517 aaPredicted RBP14.92□□□□□ -0.02
GPC6-201ENST00000377047 POLR2BP30876 1174 aaKnown RBP14.92□□□□□ -0.02
GPC6-201ENST00000377047 SLC17A8Q8NDX2 589 aa14.92□□□□□ -0.02
GPC6-201ENST00000377047 AFAP1L1Q8TED9 768 aa14.92□□□□□ -0.02
GPC6-201ENST00000377047 CCDC51Q96ER9 411 aa14.92□□□□□ -0.02
GPC6-201ENST00000377047 STAP2Q9UGK3 403 aa14.92□□□□□ -0.02
GPC6-201ENST00000377047 I3L4J1 428 aa14.92□□□□□ -0.02
GPC6-201ENST00000377047 C17orf53Q8N3J3 647 aaPredicted RBP14.92□□□□□ -0.02
GPC6-201ENST00000377047 CDHR1Q96JP9 859 aa14.92□□□□□ -0.02
GPC6-201ENST00000377047 KRT12Q99456 494 aa14.92□□□□□ -0.02
GPC6-201ENST00000377047 CYP21A2P08686 494 aa14.92□□□□□ -0.02
GPC6-201ENST00000377047 ARPP19P56211 112 aa14.92□□□□□ -0.02
GPC6-201ENST00000377047 UBE2SQ16763 222 aa14.92□□□□□ -0.02
GPC6-201ENST00000377047 MTERF2Q49AM1 385 aa14.92□□□□□ -0.02
GPC6-201ENST00000377047 HAUS1Q96CS2 278 aa14.92□□□□□ -0.02
GPC6-201ENST00000377047 FOXP1Q9H334 677 aaPredicted RBP14.92□□□□□ -0.02
GPC6-201ENST00000377047 HGSO14964 777 aaPredicted RBP14.91□□□□□ -0.02
GPC6-201ENST00000377047 C2orf69Q8N8R5 385 aa14.91□□□□□ -0.02
GPC6-201ENST00000377047 SNX25Q9H3E2 840 aa14.91□□□□□ -0.02
GPC6-201ENST00000377047 FEZ2Q9UHY8 353 aaPredicted RBP14.91□□□□□ -0.02
GPC6-201ENST00000377047 RIPOR2Q9Y4F9 1068 aa14.91□□□□□ -0.02
GPC6-201ENST00000377047 U2AF2P26368 475 aaKnown RBP eCLIP14.91□□□□□ -0.022e-6■■■■□ 23
GPC6-201ENST00000377047 CDC37Q16543 378 aaPredicted RBP14.91□□□□□ -0.02
GPC6-201ENST00000377047 STMN2Q93045 179 aa14.91□□□□□ -0.02
GPC6-201ENST00000377047 RAB17Q9H0T7 212 aa14.91□□□□□ -0.02
GPC6-201ENST00000377047 PIH1D3Q9NQM4 214 aaKnown RBP14.91□□□□□ -0.02
GPC6-201ENST00000377047 UBN2Q6ZU65 1347 aa14.91□□□□□ -0.02
GPC6-201ENST00000377047 RIOK3O14730 519 aaKnown RBP14.91□□□□□ -0.02
GPC6-201ENST00000377047 CDK8P49336 464 aa14.91□□□□□ -0.02
GPC6-201ENST00000377047 CACNB3P54284 484 aa14.91□□□□□ -0.02
GPC6-201ENST00000377047 RASGRF1Q13972 1273 aa14.91□□□□□ -0.02
GPC6-201ENST00000377047 KAZNQ674X7 775 aa14.91□□□□□ -0.02
GPC6-201ENST00000377047 ACCSQ96QU6 501 aa14.91□□□□□ -0.02
GPC6-201ENST00000377047 PTPN12Q05209 780 aaKnown RBP14.91□□□□□ -0.02
GPC6-201ENST00000377047 EXOC3L4Q17RC7 722 aa14.91□□□□□ -0.02
GPC6-201ENST00000377047 KIAA1841Q6NSI8 718 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms