RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 STK4Q13043 487 aa18.35■□□□□ 0.53
TRIM39-201ENST00000376656 BLIDQ8IZY5 108 aa18.35■□□□□ 0.53
TRIM39-201ENST00000376656 PIGBQ92521 554 aa18.35■□□□□ 0.53
TRIM39-201ENST00000376656 MS4A14Q96JA4 679 aa18.35■□□□□ 0.53
TRIM39-201ENST00000376656 RNPC3Q96LT9 517 aaKnown RBP18.35■□□□□ 0.53
TRIM39-201ENST00000376656 PLAGL2Q9UPG8 496 aa18.35■□□□□ 0.53
TRIM39-201ENST00000376656 TOGARAM1Q9Y4F4 1720 aa18.35■□□□□ 0.53
TRIM39-201ENST00000376656 FAM153BP0C7A2 387 aa18.34■□□□□ 0.53
TRIM39-201ENST00000376656 FAM153CQ494X1 144 aa18.34■□□□□ 0.53
TRIM39-201ENST00000376656 FIGNQ5HY92 759 aa18.34■□□□□ 0.53
TRIM39-201ENST00000376656 B4GALNT4Q76KP1 1039 aa18.34■□□□□ 0.53
TRIM39-201ENST00000376656 OTUD6BQ8N6M0 293 aa18.34■□□□□ 0.53
TRIM39-201ENST00000376656 CCDC43Q96MW1 224 aaKnown RBP18.34■□□□□ 0.53
TRIM39-201ENST00000376656 FAM153AQ9UHL3 310 aa18.34■□□□□ 0.53
TRIM39-201ENST00000376656 ANKRD36CQ5JPF3 1778 aa18.34■□□□□ 0.53
TRIM39-201ENST00000376656 ATF3P18847 181 aa18.34■□□□□ 0.53
TRIM39-201ENST00000376656 GUCY1A3Q02108 690 aa18.34■□□□□ 0.53
TRIM39-201ENST00000376656 APBA1Q02410 837 aa18.34■□□□□ 0.53
TRIM39-201ENST00000376656 CCDC178Q5BJE1 867 aa18.34■□□□□ 0.53
TRIM39-201ENST00000376656 FAM47AQ5JRC9 791 aa18.34■□□□□ 0.53
TRIM39-201ENST00000376656 ZSCAN29Q8IWY8 852 aaPredicted RBP18.34■□□□□ 0.53
TRIM39-201ENST00000376656 FAM207AQ9NSI2 230 aaPredicted RBP18.34■□□□□ 0.53
TRIM39-201ENST00000376656 SHANK3Q9BYB0 1731 aa18.34■□□□□ 0.53
TRIM39-201ENST00000376656 ZSCAN5CA6NGD5 496 aaPredicted RBP18.34■□□□□ 0.53
TRIM39-201ENST00000376656 FCER1AP12319 257 aa18.34■□□□□ 0.53
TRIM39-201ENST00000376656 CARSP49589 748 aaKnown RBP18.34■□□□□ 0.53
TRIM39-201ENST00000376656 PDE4DQ08499 809 aa18.34■□□□□ 0.53
TRIM39-201ENST00000376656 ZBTB1Q9Y2K1 713 aa18.34■□□□□ 0.53
TRIM39-201ENST00000376656 ESYT3A0FGR9 886 aa18.33■□□□□ 0.53
TRIM39-201ENST00000376656 ZNF233A6NK53 670 aa18.33■□□□□ 0.53
TRIM39-201ENST00000376656 KIAA0754O94854 1291 aa18.33■□□□□ 0.53
TRIM39-201ENST00000376656 GLI1P08151 1106 aa18.33■□□□□ 0.53
TRIM39-201ENST00000376656 TNFRSF8P28908 595 aa18.33■□□□□ 0.53
TRIM39-201ENST00000376656 ALS2CR12Q96Q35 445 aa18.33■□□□□ 0.53
TRIM39-201ENST00000376656 TLR10Q9BXR5 811 aa18.33■□□□□ 0.53
TRIM39-201ENST00000376656 PRDM11Q9NQV5 511 aa18.33■□□□□ 0.53
TRIM39-201ENST00000376656 NFU1Q9UMS0 254 aa18.33■□□□□ 0.53
TRIM39-201ENST00000376656 DLEC1Q9Y238 1755 aa18.33■□□□□ 0.52
TRIM39-201ENST00000376656 MEFVO15553 781 aaPredicted RBP18.33■□□□□ 0.52
TRIM39-201ENST00000376656 LSP1P33241 339 aa18.33■□□□□ 0.52
TRIM39-201ENST00000376656 USP8P40818 1118 aa18.33■□□□□ 0.52
TRIM39-201ENST00000376656 PAFAH1B1P43034 410 aa18.33■□□□□ 0.52
TRIM39-201ENST00000376656 HPS3Q969F9 1004 aa18.33■□□□□ 0.52
TRIM39-201ENST00000376656 ZNF142P52746 1687 aaPredicted RBP18.33■□□□□ 0.52
TRIM39-201ENST00000376656 NUP98P52948 1817 aa18.33■□□□□ 0.52
TRIM39-201ENST00000376656 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.33■□□□□ 0.52
TRIM39-201ENST00000376656 AKR1B10O60218 316 aa18.33■□□□□ 0.52
TRIM39-201ENST00000376656 HNRNPH3P31942 346 aaKnown RBP18.33■□□□□ 0.52
TRIM39-201ENST00000376656 FAM114A1Q8IWE2 563 aa18.33■□□□□ 0.52
TRIM39-201ENST00000376656 CICQ96RK0 1608 aaPredicted RBP18.32■□□□□ 0.52
TRIM39-201ENST00000376656 BICDL2A1A5D9 508 aa18.32■□□□□ 0.52
TRIM39-201ENST00000376656 H0YHG0 523 aa18.32■□□□□ 0.52
TRIM39-201ENST00000376656 IQCKQ8N0W5 287 aa18.32■□□□□ 0.52
TRIM39-201ENST00000376656 ATXN2Q99700 1313 aaKnown RBP18.32■□□□□ 0.52
TRIM39-201ENST00000376656 SLIT2O94813 1529 aa18.32■□□□□ 0.52
TRIM39-201ENST00000376656 BUB1O43683 1085 aa18.32■□□□□ 0.52
TRIM39-201ENST00000376656 MYL1P05976 194 aa18.32■□□□□ 0.52
TRIM39-201ENST00000376656 CFAP58Q5T655 872 aa18.32■□□□□ 0.52
TRIM39-201ENST00000376656 NAA35Q5VZE5 725 aa18.32■□□□□ 0.52
TRIM39-201ENST00000376656 KDM7AQ6ZMT4 941 aa18.32■□□□□ 0.52
TRIM39-201ENST00000376656 IFT81Q8WYA0 676 aa18.32■□□□□ 0.52
TRIM39-201ENST00000376656 MTMR8Q96EF0 704 aa18.32■□□□□ 0.52
TRIM39-201ENST00000376656 A6NNZ2 444 aa18.31■□□□□ 0.52
TRIM39-201ENST00000376656 USP17L12C9JPN9 530 aa18.31■□□□□ 0.52
TRIM39-201ENST00000376656 USP17L21D6R901 530 aa18.31■□□□□ 0.52
TRIM39-201ENST00000376656 FSBPO95073 299 aa18.31■□□□□ 0.52
TRIM39-201ENST00000376656 FGRP09769 529 aa18.31■□□□□ 0.52
TRIM39-201ENST00000376656 PLCG1P19174 1290 aa18.31■□□□□ 0.52
TRIM39-201ENST00000376656 MAGEA1P43355 309 aa18.31■□□□□ 0.52
TRIM39-201ENST00000376656 NAP1L1P55209 391 aaKnown RBP18.31■□□□□ 0.52
TRIM39-201ENST00000376656 TUBB8Q3ZCM7 444 aa18.31■□□□□ 0.52
TRIM39-201ENST00000376656 CCSER1Q9C0I3 900 aa18.31■□□□□ 0.52
TRIM39-201ENST00000376656 SIK3Q9Y2K2 1263 aa18.31■□□□□ 0.52
TRIM39-201ENST00000376656 LCA5LO95447 670 aa18.31■□□□□ 0.52
TRIM39-201ENST00000376656 CALML3P27482 149 aa18.31■□□□□ 0.52
TRIM39-201ENST00000376656 KLHDC7AQ5VTJ3 777 aa18.31■□□□□ 0.52
TRIM39-201ENST00000376656 CABS1Q96KC9 395 aa18.31■□□□□ 0.52
TRIM39-201ENST00000376656 SLC4A9Q96Q91 983 aa18.31■□□□□ 0.52
TRIM39-201ENST00000376656 EPB41L5Q9HCM4 733 aa18.31■□□□□ 0.52
TRIM39-201ENST00000376656 PCDHA4Q9UN74 947 aa18.31■□□□□ 0.52
TRIM39-201ENST00000376656 GUCY2FP51841 1108 aa18.31■□□□□ 0.52
TRIM39-201ENST00000376656 ASIC1P78348 528 aa18.31■□□□□ 0.52
TRIM39-201ENST00000376656 SF3B2Q13435 895 aaKnown RBP18.31■□□□□ 0.52
TRIM39-201ENST00000376656 INF2Q27J81 1249 aa18.31■□□□□ 0.52
TRIM39-201ENST00000376656 PIK3R5Q8WYR1 880 aa18.31■□□□□ 0.52
TRIM39-201ENST00000376656 TRIM9Q9C026 710 aa18.31■□□□□ 0.52
TRIM39-201ENST00000376656 EPN3Q9H201 632 aa18.31■□□□□ 0.52
TRIM39-201ENST00000376656 CXorf56Q9H5V9 222 aa18.31■□□□□ 0.52
TRIM39-201ENST00000376656 LRRC53A6NM62 1247 aa18.3■□□□□ 0.52
TRIM39-201ENST00000376656 MAP2K2P36507 400 aa18.3■□□□□ 0.52
TRIM39-201ENST00000376656 SEC24CP53992 1094 aa18.3■□□□□ 0.52
TRIM39-201ENST00000376656 ATP2B2Q01814 1243 aa18.3■□□□□ 0.52
TRIM39-201ENST00000376656 GUCY2DQ02846 1103 aa18.3■□□□□ 0.52
TRIM39-201ENST00000376656 RRAGAQ7L523 313 aa18.3■□□□□ 0.52
TRIM39-201ENST00000376656 IFT20Q8IY31 132 aa18.3■□□□□ 0.52
TRIM39-201ENST00000376656 ZNF473Q8WTR7 871 aaKnown RBP18.3■□□□□ 0.52
TRIM39-201ENST00000376656 BRIP1Q9BX63 1249 aa18.3■□□□□ 0.52
TRIM39-201ENST00000376656 MMRN2Q9H8L6 949 aa18.3■□□□□ 0.52
TRIM39-201ENST00000376656 GDF3Q9NR23 364 aa18.3■□□□□ 0.52
TRIM39-201ENST00000376656 NHSL1Q5SYE7 1610 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms