RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 EIF3CLB5ME19 914 aaKnown RBP16.25■□□□□ 0.19
MSH5-201ENST00000375703 N4BP1O75113 896 aaKnown RBP16.25■□□□□ 0.19
MSH5-201ENST00000375703 LMAN1P49257 510 aa16.25■□□□□ 0.19
MSH5-201ENST00000375703 PTF1AQ7RTS3 328 aa16.25■□□□□ 0.19
MSH5-201ENST00000375703 SLC51AQ86UW1 340 aa16.25■□□□□ 0.19
MSH5-201ENST00000375703 CALML4Q96GE6 196 aa16.25■□□□□ 0.19
MSH5-201ENST00000375703 EIF3CQ99613 913 aaKnown RBP16.25■□□□□ 0.19
MSH5-201ENST00000375703 LACRTQ9GZZ8 138 aa16.25■□□□□ 0.19
MSH5-201ENST00000375703 SEC63Q9UGP8 760 aaKnown RBP16.25■□□□□ 0.19
MSH5-201ENST00000375703 RCCD1A6NED2 376 aa16.25■□□□□ 0.19
MSH5-201ENST00000375703 USP14P54578 494 aa16.25■□□□□ 0.19
MSH5-201ENST00000375703 MIIPQ5JXC2 388 aa16.25■□□□□ 0.19
MSH5-201ENST00000375703 CNNM4Q6P4Q7 775 aa16.25■□□□□ 0.19
MSH5-201ENST00000375703 ZNF804AQ7Z570 1209 aa16.25■□□□□ 0.19
MSH5-201ENST00000375703 TBCKQ8TEA7 893 aa16.25■□□□□ 0.19
MSH5-201ENST00000375703 AHDC1Q5TGY3 1603 aaPredicted RBP16.24■□□□□ 0.19
MSH5-201ENST00000375703 FKBP15Q5T1M5 1219 aa16.24■□□□□ 0.19
MSH5-201ENST00000375703 CAPZA3Q96KX2 299 aa16.24■□□□□ 0.19
MSH5-201ENST00000375703 BIN2Q9UBW5 565 aaPredicted RBP16.24■□□□□ 0.19
MSH5-201ENST00000375703 RTCBQ9Y3I0 505 aaKnown RBP16.24■□□□□ 0.19
MSH5-201ENST00000375703 MAST2Q6P0Q8 1798 aa16.24■□□□□ 0.19
MSH5-201ENST00000375703 TXKP42681 527 aa16.24■□□□□ 0.19
MSH5-201ENST00000375703 NFIXQ14938 502 aa16.24■□□□□ 0.19
MSH5-201ENST00000375703 HSP90B2PQ58FF3 399 aa16.24■□□□□ 0.19
MSH5-201ENST00000375703 SV2BQ7L1I2 683 aa16.24■□□□□ 0.19
MSH5-201ENST00000375703 NEDD1Q8NHV4 660 aa16.24■□□□□ 0.19
MSH5-201ENST00000375703 ARHGEF1Q92888 912 aaKnown RBP16.24■□□□□ 0.19
MSH5-201ENST00000375703 HPS3Q969F9 1004 aa16.24■□□□□ 0.19
MSH5-201ENST00000375703 CCDC102AQ96A19 550 aa16.24■□□□□ 0.19
MSH5-201ENST00000375703 ERGIC2Q96RQ1 377 aa16.24■□□□□ 0.19
MSH5-201ENST00000375703 MMTAG2Q9BU76 263 aaKnown RBP16.24■□□□□ 0.19
MSH5-201ENST00000375703 RTFDC1Q9BY42 306 aaPredicted RBP16.24■□□□□ 0.19
MSH5-201ENST00000375703 SLC39A2Q9NP94 309 aa16.24■□□□□ 0.19
MSH5-201ENST00000375703 BTDP43251 543 aa16.23■□□□□ 0.19
MSH5-201ENST00000375703 CYP27A1Q02318 531 aa16.23■□□□□ 0.19
MSH5-201ENST00000375703 GRAPQ13588 217 aa16.23■□□□□ 0.19
MSH5-201ENST00000375703 C16orf86Q6ZW13 317 aa16.23■□□□□ 0.19
MSH5-201ENST00000375703 ZSCAN29Q8IWY8 852 aaPredicted RBP16.23■□□□□ 0.19
MSH5-201ENST00000375703 GRAPLQ8TC17 118 aaPredicted RBP16.23■□□□□ 0.19
MSH5-201ENST00000375703 GPR101Q96P66 508 aaPredicted RBP16.23■□□□□ 0.19
MSH5-201ENST00000375703 PIGSQ96S52 555 aa16.23■□□□□ 0.19
MSH5-201ENST00000375703 ACBD3Q9H3P7 528 aa16.23■□□□□ 0.19
MSH5-201ENST00000375703 SEMA6BQ9H3T3 888 aa16.23■□□□□ 0.19
MSH5-201ENST00000375703 RNF216Q9NWF9 866 aaPredicted RBP16.23■□□□□ 0.19
MSH5-201ENST00000375703 DUSP10Q9Y6W6 482 aa16.23■□□□□ 0.19
MSH5-201ENST00000375703 NRAPQ86VF7 1730 aa16.23■□□□□ 0.19
MSH5-201ENST00000375703 A0A1W2PQJ5 194 aa16.23■□□□□ 0.19
MSH5-201ENST00000375703 LRRIQ3A6PVS8 624 aaPredicted RBP16.23■□□□□ 0.19
MSH5-201ENST00000375703 MCM3P25205 808 aa16.23■□□□□ 0.19
MSH5-201ENST00000375703 ZSCAN26Q16670 478 aa16.23■□□□□ 0.19
MSH5-201ENST00000375703 FIGNQ5HY92 759 aa16.23■□□□□ 0.19
MSH5-201ENST00000375703 RPGRIP1Q96KN7 1286 aa16.23■□□□□ 0.19
MSH5-201ENST00000375703 CCDC42Q96M95 316 aa16.23■□□□□ 0.19
MSH5-201ENST00000375703 FAN1Q9Y2M0 1017 aa16.23■□□□□ 0.19
MSH5-201ENST00000375703 SMARCA1P28370 1054 aa16.22■□□□□ 0.19
MSH5-201ENST00000375703 CKAP4Q07065 602 aaKnown RBP16.22■□□□□ 0.19
MSH5-201ENST00000375703 KIF5AQ12840 1032 aa16.22■□□□□ 0.19
MSH5-201ENST00000375703 POTEDQ86YR6 584 aa16.22■□□□□ 0.19
MSH5-201ENST00000375703 TEX11Q8IYF3 940 aa16.22■□□□□ 0.19
MSH5-201ENST00000375703 KIAA0895Q8NCT3 520 aa16.22■□□□□ 0.19
MSH5-201ENST00000375703 NKRFO15226 690 aaKnown RBP eCLIP16.22■□□□□ 0.19
MSH5-201ENST00000375703 CDK17Q00537 523 aa16.22■□□□□ 0.19
MSH5-201ENST00000375703 SPA17Q15506 151 aa16.22■□□□□ 0.19
MSH5-201ENST00000375703 COBLL1Q53SF7 1204 aa16.22■□□□□ 0.19
MSH5-201ENST00000375703 CENPPQ6IPU0 288 aa16.22■□□□□ 0.19
MSH5-201ENST00000375703 CERS3Q8IU89 383 aa16.22■□□□□ 0.19
MSH5-201ENST00000375703 REXO1Q8N1G1 1221 aaKnown RBP16.22■□□□□ 0.19
MSH5-201ENST00000375703 UBA5Q9GZZ9 404 aa16.22■□□□□ 0.19
MSH5-201ENST00000375703 LRWD1Q9UFC0 647 aa16.22■□□□□ 0.19
MSH5-201ENST00000375703 MACROD2A1Z1Q3 448 aa16.21■□□□□ 0.19
MSH5-201ENST00000375703 MUM1L1Q5H9M0 696 aa16.21■□□□□ 0.19
MSH5-201ENST00000375703 CEP95Q96GE4 821 aa16.21■□□□□ 0.19
MSH5-201ENST00000375703 JADE2Q9NQC1 790 aa16.21■□□□□ 0.19
MSH5-201ENST00000375703 TMEM260Q9NX78 707 aa16.21■□□□□ 0.19
MSH5-201ENST00000375703 IDEP14735 1019 aa16.21■□□□□ 0.19
MSH5-201ENST00000375703 VAV2P52735 878 aa16.21■□□□□ 0.19
MSH5-201ENST00000375703 MAP9Q49MG5 647 aa16.21■□□□□ 0.19
MSH5-201ENST00000375703 VWA3BQ502W6 1294 aa16.21■□□□□ 0.19
MSH5-201ENST00000375703 CAGE1Q8TC20 777 aa16.21■□□□□ 0.19
MSH5-201ENST00000375703 FAM71BQ8TC56 605 aa16.21■□□□□ 0.19
MSH5-201ENST00000375703 GPR75-ASB3A0A0A6YYF3 556 aa16.2■□□□□ 0.18
MSH5-201ENST00000375703 ANO9A1A5B4 782 aa16.2■□□□□ 0.18
MSH5-201ENST00000375703 USP17L5A8MUK1 530 aa16.2■□□□□ 0.18
MSH5-201ENST00000375703 PHACTR2O75167 634 aa16.2■□□□□ 0.18
MSH5-201ENST00000375703 GRB10Q13322 594 aa16.2■□□□□ 0.18
MSH5-201ENST00000375703 ORC2Q13416 577 aaPredicted RBP16.2■□□□□ 0.18
MSH5-201ENST00000375703 AMIGO3Q86WK7 504 aa16.2■□□□□ 0.18
MSH5-201ENST00000375703 GOLGA5Q8TBA6 731 aa16.2■□□□□ 0.18
MSH5-201ENST00000375703 SECISBP2LQ93073 1101 aaKnown RBP16.2■□□□□ 0.18
MSH5-201ENST00000375703 IQCDQ96DY2 449 aa16.2■□□□□ 0.18
MSH5-201ENST00000375703 TSGA10Q9BZW7 698 aa16.2■□□□□ 0.18
MSH5-201ENST00000375703 MYMKA6NI61 221 aa16.2■□□□□ 0.18
MSH5-201ENST00000375703 ZNF185O15231 689 aa16.2■□□□□ 0.18
MSH5-201ENST00000375703 CALCRLQ16602 461 aa16.2■□□□□ 0.18
MSH5-201ENST00000375703 DYMQ7RTS9 669 aa16.2■□□□□ 0.18
MSH5-201ENST00000375703 CDK5RAP3Q96JB5 506 aa16.2■□□□□ 0.18
MSH5-201ENST00000375703 MTMR9Q96QG7 549 aa16.2■□□□□ 0.18
MSH5-201ENST00000375703 PURBQ96QR8 312 aaKnown RBP16.2■□□□□ 0.18
MSH5-201ENST00000375703 NDST4Q9H3R1 872 aa16.2■□□□□ 0.18
MSH5-201ENST00000375703 CD209Q9NNX6 404 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms