RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 SPZ1Q9BXG8 430 aa23.25■■□□□ 1.31
TMEM53-205ENST00000372244 USP26Q9BXU7 913 aa23.25■■□□□ 1.31
TMEM53-205ENST00000372244 SENP6Q9GZR1 1112 aaPredicted RBP23.25■■□□□ 1.31
TMEM53-205ENST00000372244 PCDHA1Q9Y5I3 950 aa23.25■■□□□ 1.31
TMEM53-205ENST00000372244 SLC12A7Q9Y666 1083 aa23.25■■□□□ 1.31
TMEM53-205ENST00000372244 MCM3APO60318 1980 aa23.25■■□□□ 1.31
TMEM53-205ENST00000372244 ADAMTS4O75173 837 aa23.24■■□□□ 1.31
TMEM53-205ENST00000372244 GNAQP50148 359 aa23.24■■□□□ 1.31
TMEM53-205ENST00000372244 GHRHRQ02643 423 aa23.24■■□□□ 1.31
TMEM53-205ENST00000372244 FANCBQ8NB91 859 aa23.24■■□□□ 1.31
TMEM53-205ENST00000372244 LENG1Q96BZ8 264 aaPredicted RBP23.24■■□□□ 1.31
TMEM53-205ENST00000372244 NR2E3Q9Y5X4 410 aa23.24■■□□□ 1.31
TMEM53-205ENST00000372244 KBTBD13C9JR72 458 aa23.24■■□□□ 1.31
TMEM53-205ENST00000372244 EDNRBP24530 442 aa23.24■■□□□ 1.31
TMEM53-205ENST00000372244 TRAF1Q13077 416 aa23.24■■□□□ 1.31
TMEM53-205ENST00000372244 RNF180Q86T96 592 aa23.24■■□□□ 1.31
TMEM53-205ENST00000372244 KLHDC9Q8NEP7 349 aa23.24■■□□□ 1.31
TMEM53-205ENST00000372244 SYTL5Q8TDW5 730 aaPredicted RBP23.24■■□□□ 1.31
TMEM53-205ENST00000372244 TCEANC2Q96MN5 208 aa23.24■■□□□ 1.31
TMEM53-205ENST00000372244 DNAH12Q6ZR08 3092 aa23.23■■□□□ 1.31
TMEM53-205ENST00000372244 NKX3-2P78367 333 aa23.23■■□□□ 1.31
TMEM53-205ENST00000372244 IQSEC1Q6DN90 963 aa23.23■■□□□ 1.31
TMEM53-205ENST00000372244 CCSAPQ6IQ19 270 aaPredicted RBP23.23■■□□□ 1.31
TMEM53-205ENST00000372244 HOMER1Q86YM7 354 aa23.23■■□□□ 1.31
TMEM53-205ENST00000372244 SRBD1Q8N5C6 995 aaKnown RBP23.23■■□□□ 1.31
TMEM53-205ENST00000372244 SAMD3Q8N6K7 520 aa23.23■■□□□ 1.31
TMEM53-205ENST00000372244 VTA1Q9NP79 307 aa23.23■■□□□ 1.31
TMEM53-205ENST00000372244 PDGFCQ9NRA1 345 aa23.23■■□□□ 1.31
TMEM53-205ENST00000372244 MAP3K20Q9NYL2 800 aaKnown RBP23.23■■□□□ 1.31
TMEM53-205ENST00000372244 BRPF3Q9ULD4 1205 aa23.23■■□□□ 1.31
TMEM53-205ENST00000372244 PHF24Q9UPV7 400 aa23.23■■□□□ 1.31
TMEM53-205ENST00000372244 FRMPD3Q5JV73 1810 aa23.23■■□□□ 1.31
TMEM53-205ENST00000372244 LCTP09848 1927 aa23.22■■□□□ 1.31
TMEM53-205ENST00000372244 HSD17B4P51659 736 aa23.22■■□□□ 1.31
TMEM53-205ENST00000372244 LRRC26Q2I0M4 334 aa23.22■■□□□ 1.31
TMEM53-205ENST00000372244 APOA5Q6Q788 366 aa23.22■■□□□ 1.31
TMEM53-205ENST00000372244 FBXL16Q8N461 479 aa23.22■■□□□ 1.31
TMEM53-205ENST00000372244 TSEN34Q9BSV6 310 aaKnown RBP23.22■■□□□ 1.31
TMEM53-205ENST00000372244 UPF3AQ9H1J1 476 aaKnown RBP23.22■■□□□ 1.31
TMEM53-205ENST00000372244 COL20A1Q9P218 1284 aa23.22■■□□□ 1.31
TMEM53-205ENST00000372244 GNEQ9Y223 722 aaKnown RBP23.22■■□□□ 1.31
TMEM53-205ENST00000372244 SYNRGQ9UMZ2 1314 aa23.22■■□□□ 1.31
TMEM53-205ENST00000372244 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.21■■□□□ 1.31
TMEM53-205ENST00000372244 RBM47A0AV96 593 aaKnown RBP23.21■■□□□ 1.31
TMEM53-205ENST00000372244 PLEKHA8P1O95397 391 aa23.21■■□□□ 1.31
TMEM53-205ENST00000372244 RXRAP19793 462 aa23.21■■□□□ 1.31
TMEM53-205ENST00000372244 ADCYAP1R1P41586 468 aa23.21■■□□□ 1.31
TMEM53-205ENST00000372244 GJA9P57773 515 aa23.21■■□□□ 1.31
TMEM53-205ENST00000372244 TNFAIP2Q03169 654 aa23.21■■□□□ 1.31
TMEM53-205ENST00000372244 EEPD1Q7L9B9 569 aa23.21■■□□□ 1.31
TMEM53-205ENST00000372244 FBXO16Q8IX29 292 aaPredicted RBP23.21■■□□□ 1.31
TMEM53-205ENST00000372244 JAKMIP1Q96N16 626 aaKnown RBP23.21■■□□□ 1.31
TMEM53-205ENST00000372244 TAAR1Q96RJ0 339 aa23.21■■□□□ 1.31
TMEM53-205ENST00000372244 CTAGE5O15320 804 aa23.2■■□□□ 1.3
TMEM53-205ENST00000372244 MYCNP04198 464 aaPredicted RBP23.2■■□□□ 1.3
TMEM53-205ENST00000372244 CPA1P15085 419 aa23.2■■□□□ 1.3
TMEM53-205ENST00000372244 CST5P28325 142 aaPredicted RBP23.2■■□□□ 1.3
TMEM53-205ENST00000372244 SYNE3Q6ZMZ3 975 aa23.2■■□□□ 1.3
TMEM53-205ENST00000372244 NSUN6Q8TEA1 469 aaKnown RBP23.2■■□□□ 1.3
TMEM53-205ENST00000372244 B4DLN1 442 aa23.19■■□□□ 1.3
TMEM53-205ENST00000372244 CFBP00751 764 aa23.19■■□□□ 1.3
TMEM53-205ENST00000372244 SMPD1P17405 629 aa23.19■■□□□ 1.3
TMEM53-205ENST00000372244 MRPL12P52815 198 aaKnown RBP23.19■■□□□ 1.3
TMEM53-205ENST00000372244 SLC39A5Q6ZMH5 540 aa23.19■■□□□ 1.3
TMEM53-205ENST00000372244 CMTR1Q8N1G2 835 aaKnown RBP23.19■■□□□ 1.3
TMEM53-205ENST00000372244 RRP36Q96EU6 259 aaKnown RBP23.19■■□□□ 1.3
TMEM53-205ENST00000372244 IWS1Q96ST2 819 aa23.19■■□□□ 1.3
TMEM53-205ENST00000372244 Q9Y3F1 56 aa23.19■■□□□ 1.3
TMEM53-205ENST00000372244 PSMA5P28066 241 aa23.18■■□□□ 1.3
TMEM53-205ENST00000372244 PDE4DQ08499 809 aa23.18■■□□□ 1.3
TMEM53-205ENST00000372244 KCNA10Q16322 511 aa23.18■■□□□ 1.3
TMEM53-205ENST00000372244 C1orf53Q5VUE5 145 aa23.18■■□□□ 1.3
TMEM53-205ENST00000372244 BLOC1S2Q6QNY1 142 aa23.18■■□□□ 1.3
TMEM53-205ENST00000372244 TMTC3Q6ZXV5 915 aa23.18■■□□□ 1.3
TMEM53-205ENST00000372244 MICU3Q86XE3 530 aa23.18■■□□□ 1.3
TMEM53-205ENST00000372244 RAB11FIP4Q86YS3 637 aa23.18■■□□□ 1.3
TMEM53-205ENST00000372244 RMDN3Q96TC7 470 aa23.18■■□□□ 1.3
TMEM53-205ENST00000372244 MPHOSPH6Q99547 160 aaKnown RBP23.18■■□□□ 1.3
TMEM53-205ENST00000372244 AGXT2Q9BYV1 514 aa23.18■■□□□ 1.3
TMEM53-205ENST00000372244 RANBP2P49792 3224 aaKnown RBP23.18■■□□□ 1.3
TMEM53-205ENST00000372244 MYADML2A6NDP7 307 aa23.17■■□□□ 1.3
TMEM53-205ENST00000372244 RPS6KB1P23443 525 aa23.17■■□□□ 1.3
TMEM53-205ENST00000372244 RCAN1P53805 252 aa23.17■■□□□ 1.3
TMEM53-205ENST00000372244 IRX5P78411 483 aaPredicted RBP23.17■■□□□ 1.3
TMEM53-205ENST00000372244 SNX17Q15036 470 aa23.17■■□□□ 1.3
TMEM53-205ENST00000372244 TMEM63BQ5T3F8 832 aa23.17■■□□□ 1.3
TMEM53-205ENST00000372244 PIBF1Q8WXW3 757 aa23.17■■□□□ 1.3
TMEM53-205ENST00000372244 FERMT2Q96AC1 680 aa23.17■■□□□ 1.3
TMEM53-205ENST00000372244 SPC25Q9HBM1 224 aa23.17■■□□□ 1.3
TMEM53-205ENST00000372244 FAM217BQ9NTX9 383 aaPredicted RBP23.17■■□□□ 1.3
TMEM53-205ENST00000372244 MYH6P13533 1939 aa23.17■■□□□ 1.3
TMEM53-205ENST00000372244 MOXD2PA6NHM9 499 aa23.17■■□□□ 1.3
TMEM53-205ENST00000372244 ZBTB43O43298 467 aa23.17■■□□□ 1.3
TMEM53-205ENST00000372244 C6orf222P0C671 652 aaPredicted RBP23.17■■□□□ 1.3
TMEM53-205ENST00000372244 ACLYP53396 1101 aa23.17■■□□□ 1.3
TMEM53-205ENST00000372244 ATN1P54259 1190 aaPredicted RBP23.17■■□□□ 1.3
TMEM53-205ENST00000372244 DUSP28Q4G0W2 176 aa23.17■■□□□ 1.3
TMEM53-205ENST00000372244 C7orf61Q8IZ16 206 aa23.17■■□□□ 1.3
TMEM53-205ENST00000372244 WDR11Q9BZH6 1224 aa23.17■■□□□ 1.3
TMEM53-205ENST00000372244 ALPK3Q96L96 1907 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms