RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 OVOS2A0A0J9YW53 1432 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 OVOS2Q6IE36 1432 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 CYP27B1O15528 508 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 PPP2R3AQ06190 1150 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 TYW1BQ6NUM6 668 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 PIGSQ96S52 555 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 PUS7LQ9H0K6 701 aaKnown RBP10.75□□□□□ -0.69
COL4A6-202ENST00000372216 SPHKAPQ2M3C7 1700 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 NCAPD2Q15021 1401 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 BTBD18B2RXH4 712 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 SLC12A2P55011 1212 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 TBC1D9BQ66K14 1250 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 SDCCAG8Q86SQ7 713 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-202ENST00000372216 KLHL7Q8IXQ5 586 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 KCNJ18B7U540 433 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 XPAP23025 273 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-202ENST00000372216 MTX1Q13505 466 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 KCNJ12Q14500 433 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 KAZNQ674X7 775 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 CLEC4GQ6UXB4 293 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 SYMPKQ92797 1274 aaKnown RBP10.75□□□□□ -0.69
COL4A6-202ENST00000372216 RMDN2Q96LZ7 410 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 CLIC6Q96NY7 704 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 NLRC4Q9NPP4 1024 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 PIH1D3Q9NQM4 214 aaKnown RBP10.75□□□□□ -0.69
COL4A6-202ENST00000372216 ADD3Q9UEY8 706 aaKnown RBP10.75□□□□□ -0.69
COL4A6-202ENST00000372216 DLATP10515 647 aaKnown RBP10.75□□□□□ -0.69
COL4A6-202ENST00000372216 TUBB4BP68371 445 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 ARMCX5Q6P1M9 558 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 SLC10A4Q96EP9 437 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 HAUS2Q9NVX0 235 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 STAP2Q9UGK3 403 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 CLIC4Q9Y696 253 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 ADGRB3O60242 1522 aa10.75□□□□□ -0.69
COL4A6-202ENST00000372216 RBM6P78332 1123 aaKnown RBP10.74□□□□□ -0.69
COL4A6-202ENST00000372216 CEP128Q6ZU80 1094 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 INTS8Q75QN2 995 aaKnown RBP10.74□□□□□ -0.69
COL4A6-202ENST00000372216 SOS2Q07890 1332 aaPredicted RBP10.74□□□□□ -0.69
COL4A6-202ENST00000372216 PTPN12Q05209 780 aaKnown RBP10.74□□□□□ -0.69
COL4A6-202ENST00000372216 U2AF1L4Q8WU68 220 aaKnown RBP10.74□□□□□ -0.69
COL4A6-202ENST00000372216 SYNDIG1Q9H7V2 258 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 SMYD2Q9NRG4 433 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 ASIC3Q9UHC3 531 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 AXIN2Q9Y2T1 843 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.74□□□□□ -0.69
COL4A6-202ENST00000372216 PTGDRQ13258 359 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 TRIM50Q86XT4 487 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 RASGRP4Q8TDF6 673 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 NARFQ9UHQ1 456 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 KIAA1024Q9UPX6 916 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 COL4A3BPQ9Y5P4 624 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 LONP1P36776 959 aaKnown RBP10.74□□□□□ -0.69
COL4A6-202ENST00000372216 PIK3CAP42336 1068 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 SYCE1Q8N0S2 351 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 TTLL11Q8NHH1 800 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 USP28Q96RU2 1077 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 NUCKS1Q9H1E3 243 aaKnown RBP10.74□□□□□ -0.69
COL4A6-202ENST00000372216 SLC39A2Q9NP94 309 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 UBN1Q9NPG3 1134 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 STIM2Q9P246 746 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 CYP2D7A0A087X1C5 515 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 ECE2O60344 883 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 MAGEA1P43355 309 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 SNAP25P60880 206 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 AOC3Q16853 763 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 RPS6KC1Q96S38 1066 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 C1orf112Q9NSG2 853 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 TXNDC9O14530 226 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 STAM2O75886 525 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 RPN1P04843 607 aaKnown RBP10.74□□□□□ -0.69
COL4A6-202ENST00000372216 TMEM191BP0C7N4 346 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 PDE1CQ14123 709 aaPredicted RBP10.74□□□□□ -0.69
COL4A6-202ENST00000372216 ADAT2Q7Z6V5 191 aaKnown RBP10.74□□□□□ -0.69
COL4A6-202ENST00000372216 TMTC1Q8IUR5 882 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 MAP4K1Q92918 833 aa10.74□□□□□ -0.69
COL4A6-202ENST00000372216 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.74□□□□□ -0.69
COL4A6-202ENST00000372216 CEP104O60308 925 aa10.73□□□□□ -0.69
COL4A6-202ENST00000372216 N4BP1O75113 896 aaKnown RBP10.73□□□□□ -0.69
COL4A6-202ENST00000372216 RASGRF1Q13972 1273 aa10.73□□□□□ -0.69
COL4A6-202ENST00000372216 C8orf74Q6P047 294 aa10.73□□□□□ -0.69
COL4A6-202ENST00000372216 MYLK4Q86YV6 388 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-202ENST00000372216 STMN2Q93045 179 aa10.73□□□□□ -0.69
COL4A6-202ENST00000372216 GJD4Q96KN9 370 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-202ENST00000372216 TRIM56Q9BRZ2 755 aaKnown RBP10.73□□□□□ -0.69
COL4A6-202ENST00000372216 FTOQ9C0B1 505 aaKnown RBP eCLIP10.73□□□□□ -0.69
COL4A6-202ENST00000372216 CARMIL3Q8ND23 1372 aa10.73□□□□□ -0.69
COL4A6-202ENST00000372216 FBXW4P57775 412 aa10.73□□□□□ -0.69
COL4A6-202ENST00000372216 SETDB1Q15047 1291 aa10.73□□□□□ -0.69
COL4A6-202ENST00000372216 NKX1-1Q15270 411 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-202ENST00000372216 SND1Q7KZF4 910 aaKnown RBP eCLIP10.73□□□□□ -0.69
COL4A6-202ENST00000372216 VPS37BQ9H9H4 285 aa10.73□□□□□ -0.69
COL4A6-202ENST00000372216 CEP152O94986 1710 aa10.73□□□□□ -0.69
COL4A6-202ENST00000372216 CRKP46108 304 aa10.73□□□□□ -0.69
COL4A6-202ENST00000372216 SLC27A3Q5K4L6 730 aa10.73□□□□□ -0.69
COL4A6-202ENST00000372216 CCDC84Q86UT8 332 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-202ENST00000372216 RETREG2Q8NC44 543 aa10.73□□□□□ -0.69
COL4A6-202ENST00000372216 SH3RF3Q8TEJ3 882 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-202ENST00000372216 COA7Q96BR5 231 aa10.73□□□□□ -0.69
COL4A6-202ENST00000372216 SAMD15Q9P1V8 674 aa10.73□□□□□ -0.69
COL4A6-202ENST00000372216 ZNF853P0CG23 659 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms