RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 CALR3Q96L12 384 aaKnown RBP16.55■□□□□ 0.24
COL5A1-201ENST00000371817 NUDCD1Q96RS6 583 aa16.55■□□□□ 0.24
COL5A1-201ENST00000371817 FANCLQ9NW38 375 aa16.55■□□□□ 0.24
COL5A1-201ENST00000371817 IBTKQ9P2D0 1353 aaPredicted RBP16.55■□□□□ 0.24
COL5A1-201ENST00000371817 BLVRAP53004 296 aa16.55■□□□□ 0.24
COL5A1-201ENST00000371817 ANKRD13DQ6ZTN6 518 aa16.55■□□□□ 0.24
COL5A1-201ENST00000371817 SEPT3Q9UH03 358 aa16.55■□□□□ 0.24
COL5A1-201ENST00000371817 MCM9Q9NXL9 1143 aa16.55■□□□□ 0.24
COL5A1-201ENST00000371817 ZFP69BQ9UJL9 534 aa16.55■□□□□ 0.24
COL5A1-201ENST00000371817 TRIM33Q9UPN9 1127 aa16.55■□□□□ 0.24
COL5A1-201ENST00000371817 FANCD2Q9BXW9 1451 aa16.55■□□□□ 0.24
COL5A1-201ENST00000371817 GOLGA8FQ08AF8 430 aa16.55■□□□□ 0.24
COL5A1-201ENST00000371817 GOLGA8DPQ0D2H9 430 aa16.55■□□□□ 0.24
COL5A1-201ENST00000371817 OR9Q1Q8NGQ5 310 aa16.55■□□□□ 0.24
COL5A1-201ENST00000371817 PBKQ96KB5 322 aa16.55■□□□□ 0.24
COL5A1-201ENST00000371817 CCDC90BQ9GZT6 254 aa16.55■□□□□ 0.24
COL5A1-201ENST00000371817 TRPC6Q9Y210 931 aa16.55■□□□□ 0.24
COL5A1-201ENST00000371817 PLCG2P16885 1265 aa16.55■□□□□ 0.24
COL5A1-201ENST00000371817 KPNA2P52292 529 aaKnown RBP16.55■□□□□ 0.24
COL5A1-201ENST00000371817 ZNF653Q96CK0 615 aa16.55■□□□□ 0.24
COL5A1-201ENST00000371817 ZBTB3Q9H5J0 574 aa16.55■□□□□ 0.24
COL5A1-201ENST00000371817 GUCY1A3Q02108 690 aa16.54■□□□□ 0.24
COL5A1-201ENST00000371817 CDV3Q9UKY7 258 aaKnown RBP16.54■□□□□ 0.24
COL5A1-201ENST00000371817 E2F6O75461 281 aa16.54■□□□□ 0.24
COL5A1-201ENST00000371817 MAP4P27816 1152 aaKnown RBP16.54■□□□□ 0.24
COL5A1-201ENST00000371817 CYP4F22Q6NT55 531 aa16.54■□□□□ 0.24
COL5A1-201ENST00000371817 GEMIN8Q9NWZ8 242 aaKnown RBP16.54■□□□□ 0.24
COL5A1-201ENST00000371817 GMNCA6NCL1 334 aa16.54■□□□□ 0.24
COL5A1-201ENST00000371817 SERPINB1P30740 379 aa16.54■□□□□ 0.24
COL5A1-201ENST00000371817 IQCB1Q15051 598 aa16.54■□□□□ 0.24
COL5A1-201ENST00000371817 SRRM1Q8IYB3 904 aaKnown RBP16.54■□□□□ 0.24
COL5A1-201ENST00000371817 NACA2Q9H009 215 aa16.54■□□□□ 0.24
COL5A1-201ENST00000371817 G3BP2Q9UN86 482 aaKnown RBP16.54■□□□□ 0.24
COL5A1-201ENST00000371817 SLCO1A2P46721 670 aa16.54■□□□□ 0.24
COL5A1-201ENST00000371817 OCRLQ01968 901 aa16.54■□□□□ 0.24
COL5A1-201ENST00000371817 FAM8A1Q9UBU6 413 aa16.54■□□□□ 0.24
COL5A1-201ENST00000371817 MT-ND3P03897 115 aa16.54■□□□□ 0.24
COL5A1-201ENST00000371817 HDDC2Q7Z4H3 204 aa16.54■□□□□ 0.24
COL5A1-201ENST00000371817 ANKLE2Q86XL3 938 aa16.54■□□□□ 0.24
COL5A1-201ENST00000371817 BLZF1Q9H2G9 400 aa16.54■□□□□ 0.24
COL5A1-201ENST00000371817 GID8Q9NWU2 228 aa16.54■□□□□ 0.24
COL5A1-201ENST00000371817 KIF17Q9P2E2 1029 aa16.54■□□□□ 0.24
COL5A1-201ENST00000371817 BRD1O95696 1058 aa16.54■□□□□ 0.24
COL5A1-201ENST00000371817 CPP00450 1065 aa16.54■□□□□ 0.24
COL5A1-201ENST00000371817 CD19P15391 556 aa16.54■□□□□ 0.24
COL5A1-201ENST00000371817 TXKP42681 527 aa16.54■□□□□ 0.24
COL5A1-201ENST00000371817 FSCBQ5H9T9 825 aa16.54■□□□□ 0.24
COL5A1-201ENST00000371817 NCOA5Q9HCD5 579 aaKnown RBP16.54■□□□□ 0.24
COL5A1-201ENST00000371817 ANAPC5Q9UJX4 755 aa16.54■□□□□ 0.24
COL5A1-201ENST00000371817 WDR91A4D1P6 747 aa16.53■□□□□ 0.24
COL5A1-201ENST00000371817 NBPF26B4DH59 902 aa16.53■□□□□ 0.24
COL5A1-201ENST00000371817 PRR23D1E9PI22 279 aaPredicted RBP16.53■□□□□ 0.24
COL5A1-201ENST00000371817 PRR23D2P0DMB1 279 aaPredicted RBP16.53■□□□□ 0.24
COL5A1-201ENST00000371817 S100A5P33763 92 aa16.53■□□□□ 0.24
COL5A1-201ENST00000371817 RINLQ6ZS11 566 aa16.53■□□□□ 0.24
COL5A1-201ENST00000371817 NBPF15Q8N660 670 aa16.53■□□□□ 0.24
COL5A1-201ENST00000371817 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.53■□□□□ 0.24
COL5A1-201ENST00000371817 KIF2CQ99661 725 aa16.53■□□□□ 0.24
COL5A1-201ENST00000371817 ABCB6Q9NP58 842 aa16.53■□□□□ 0.24
COL5A1-201ENST00000371817 KDM3AQ9Y4C1 1321 aa16.53■□□□□ 0.24
COL5A1-201ENST00000371817 SLC12A1Q13621 1099 aa16.53■□□□□ 0.24
COL5A1-201ENST00000371817 PRPSAP1Q14558 356 aa16.53■□□□□ 0.24
COL5A1-201ENST00000371817 ECT2Q9H8V3 914 aa16.53■□□□□ 0.24
COL5A1-201ENST00000371817 NRBP1Q9UHY1 535 aa16.53■□□□□ 0.24
COL5A1-201ENST00000371817 KIF21AQ7Z4S6 1674 aa16.53■□□□□ 0.24
COL5A1-201ENST00000371817 N4BP1O75113 896 aaKnown RBP16.53■□□□□ 0.24
COL5A1-201ENST00000371817 ZC3H12BQ5HYM0 836 aaKnown RBP16.53■□□□□ 0.24
COL5A1-201ENST00000371817 CHPF2Q9P2E5 772 aa16.53■□□□□ 0.24
COL5A1-201ENST00000371817 CADPS2Q86UW7 1296 aa16.53■□□□□ 0.24
COL5A1-201ENST00000371817 NAF1Q96HR8 494 aaKnown RBP16.53■□□□□ 0.24
COL5A1-201ENST00000371817 EHD2Q9NZN4 543 aa16.53■□□□□ 0.24
COL5A1-201ENST00000371817 CXCR5P32302 372 aa16.53■□□□□ 0.24
COL5A1-201ENST00000371817 PDE6BP35913 854 aa16.53■□□□□ 0.24
COL5A1-201ENST00000371817 PDCLQ13371 301 aa16.53■□□□□ 0.24
COL5A1-201ENST00000371817 SGO2Q562F6 1265 aa16.53■□□□□ 0.24
COL5A1-201ENST00000371817 THOC1Q96FV9 657 aaKnown RBP16.53■□□□□ 0.24
COL5A1-201ENST00000371817 TEX13AQ9BXU3 409 aaPredicted RBP16.53■□□□□ 0.24
COL5A1-201ENST00000371817 AATFQ9NY61 560 aaKnown RBP eCLIP16.53■□□□□ 0.24
COL5A1-201ENST00000371817 IPO5O00410 1097 aaKnown RBP16.52■□□□□ 0.24
COL5A1-201ENST00000371817 SKA2Q8WVK7 121 aaPredicted RBP16.52■□□□□ 0.24
COL5A1-201ENST00000371817 ZBTB40Q9NUA8 1239 aa16.52■□□□□ 0.24
COL5A1-201ENST00000371817 RHBDL2Q9NX52 303 aa16.52■□□□□ 0.24
COL5A1-201ENST00000371817 A0A0G2JND7 137 aa16.52■□□□□ 0.24
COL5A1-201ENST00000371817 DYMQ7RTS9 669 aa16.52■□□□□ 0.24
COL5A1-201ENST00000371817 TEX12Q9BXU0 123 aa16.52■□□□□ 0.24
COL5A1-201ENST00000371817 WDR47O94967 919 aa16.52■□□□□ 0.24
COL5A1-201ENST00000371817 NAIPQ13075 1403 aa16.52■□□□□ 0.24
COL5A1-201ENST00000371817 C10orf76Q5T2E6 689 aa16.52■□□□□ 0.24
COL5A1-201ENST00000371817 ARMCX6Q7L4S7 300 aa16.52■□□□□ 0.24
COL5A1-201ENST00000371817 NUDT16Q96DE0 195 aaKnown RBP16.52■□□□□ 0.24
COL5A1-201ENST00000371817 GYS2P54840 703 aa16.52■□□□□ 0.23
COL5A1-201ENST00000371817 SPATA1Q5VX52 437 aa16.52■□□□□ 0.23
COL5A1-201ENST00000371817 DIS3L2Q8IYB7 885 aaKnown RBP16.52■□□□□ 0.23
COL5A1-201ENST00000371817 SLC7A5Q01650 507 aa16.52■□□□□ 0.23
COL5A1-201ENST00000371817 CEP78Q5JTW2 689 aa16.52■□□□□ 0.23
COL5A1-201ENST00000371817 NT5C3AQ9H0P0 336 aa16.52■□□□□ 0.23
COL5A1-201ENST00000371817 GAPVD1Q14C86 1478 aa16.52■□□□□ 0.23
COL5A1-201ENST00000371817 H0YC42 278 aa16.52■□□□□ 0.23
COL5A1-201ENST00000371817 ECEL1O95672 775 aa16.52■□□□□ 0.23
COL5A1-201ENST00000371817 PFKFB1P16118 471 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms