RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 NEUROG2Q9H2A3 272 aa9.71□□□□□ -0.86
SMARCA1-203ENST00000371123 CPVLQ9H3G5 476 aa9.71□□□□□ -0.86
SMARCA1-203ENST00000371123 PPANQ9NQ55 473 aaKnown RBP9.71□□□□□ -0.86
SMARCA1-203ENST00000371123 LIMA1Q9UHB6 759 aaKnown RBP9.71□□□□□ -0.86
SMARCA1-203ENST00000371123 THRAP3Q9Y2W1 955 aaKnown RBP9.71□□□□□ -0.86
SMARCA1-203ENST00000371123 XDHP47989 1333 aa9.71□□□□□ -0.86
SMARCA1-203ENST00000371123 HMGB1P09429 215 aaKnown RBP9.71□□□□□ -0.86
SMARCA1-203ENST00000371123 SARNPP82979 210 aaKnown RBP9.71□□□□□ -0.86
SMARCA1-203ENST00000371123 CYP26C1Q6V0L0 522 aa9.71□□□□□ -0.86
SMARCA1-203ENST00000371123 LRP10Q7Z4F1 713 aa9.71□□□□□ -0.86
SMARCA1-203ENST00000371123 TBC1D10CQ8IV04 446 aa9.71□□□□□ -0.86
SMARCA1-203ENST00000371123 PRCCQ92733 491 aaPredicted RBP9.71□□□□□ -0.86
SMARCA1-203ENST00000371123 PAGE5Q96GU1 130 aa9.71□□□□□ -0.86
SMARCA1-203ENST00000371123 RUFY1Q96T51 708 aa9.71□□□□□ -0.86
SMARCA1-203ENST00000371123 NFU1Q9UMS0 254 aa9.71□□□□□ -0.86
SMARCA1-203ENST00000371123 CTNND2Q9UQB3 1225 aa9.71□□□□□ -0.86
SMARCA1-203ENST00000371123 SPATA31A3Q5VYP0 1347 aa9.71□□□□□ -0.86
SMARCA1-203ENST00000371123 CPDO75976 1380 aa9.71□□□□□ -0.86
SMARCA1-203ENST00000371123 MYH6P13533 1939 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 ERCC5P28715 1186 aaPredicted RBP9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 RPS6KA3P51812 740 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 MYO1EQ12965 1108 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 SLC5A9Q2M3M2 681 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 CCDC178Q5BJE1 867 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 PHC3Q8NDX5 983 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 LRRC15Q8TF66 581 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 METTL22Q9BUU2 404 aaPredicted RBP9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 NACAP1Q9BZK3 213 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 NFAT5O94916 1531 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 PHF20L1A8MW92 1017 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 E7EVH7 732 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 LGR5O75473 907 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 NR1D1P20393 614 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 ITGA6P23229 1130 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 WTAPQ15007 396 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 LACTB2Q53H82 288 aaPredicted RBP9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 CCDC122Q5T0U0 273 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 CERKQ8TCT0 537 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 AGAP11Q8TF27 550 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 NDST4Q9H3R1 872 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 SLC5A4Q9NY91 659 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 TRPC6Q9Y210 931 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 PLEKHG3A1L390 1219 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 ANKRD18BA2A2Z9 1011 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 A6NHS1 94 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 TRAPPC3O43617 180 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 TUBBP07437 444 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 GCKP35557 465 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 COPB1P53618 953 aaKnown RBP9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 TUBB4BP68371 445 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 TDRD12Q587J7 1177 aaKnown RBP9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 ARMC2Q8NEN0 867 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 CASKIN2Q8WXE0 1202 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 SNX12Q9UMY4 172 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 PCDHGC5Q9Y5F6 944 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 WDR17Q8IZU2 1322 aa9.7□□□□□ -0.86
SMARCA1-203ENST00000371123 C5orf60A6NFR6 353 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 EPHB6O15197 1021 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 ANP32DO95626 131 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 PHKA1P46020 1223 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 IL17AQ16552 155 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 CNGA4Q8IV77 575 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 KRI1Q8N9T8 703 aaKnown RBP9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 SEC16BQ96JE7 1060 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 TSKSQ9UJT2 592 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 ASAP1Q9ULH1 1129 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 MYH7BA7E2Y1 1941 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 LTN1O94822 1766 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 ZNF532Q9HCE3 1301 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 TMCO5BA8MYB1 307 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 RTN1Q16799 776 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 ITFG2Q969R8 447 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.69□□□□□ -0.863e-7■■□□□ 12.2
SMARCA1-203ENST00000371123 COPRSQ9NQ92 184 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 GDF3Q9NR23 364 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 LMCD1Q9NZU5 365 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 LRP6O75581 1613 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 TSPY2A6NKD2 308 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 EYA2O00167 538 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 IRS4O14654 1257 aaPredicted RBP9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 KRT18P05783 430 aaKnown RBP9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 XBP1P17861 261 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 BCAMP50895 628 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 GUCY2FP51841 1108 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 MEA1Q16626 185 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 TAX1BP1Q86VP1 789 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 OCEL1Q9H607 264 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 MKNK2Q9HBH9 465 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 TBC1D7Q9P0N9 293 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 MAGEC2Q9UBF1 373 aaPredicted RBP9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 SAP30BPQ9UHR5 308 aaKnown RBP9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 GGA2Q9UJY4 613 aa9.69□□□□□ -0.86
SMARCA1-203ENST00000371123 MAP3K15Q6ZN16 1313 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 SPDYE5A6NIY4 337 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 CASP7P55210 303 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 ICA1Q05084 483 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 MAP3K12Q12852 859 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 TCP11X2Q5H9J9 407 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 ZFYVE27Q5T4F4 411 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 CCDC181Q5TID7 509 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms