RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 hCG_1642624A0A1W2PR95 340 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 USP17L15C9J2P7 530 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 USP17L13C9JLJ4 530 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 USP17L11C9JVI0 530 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 USP17L18D6R9N7 530 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 USP17L22D6RA61 530 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 USP17L17D6RBQ6 530 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 USP17L19D6RCP7 530 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 USP17L20D6RJB6 530 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 DTNBO60941 627 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 FDX1P10109 184 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 BMP8BP34820 402 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 NAPAP54920 295 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 HERVK_113P62684 666 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 IRX3P78415 501 aaPredicted RBP7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 USP17L24Q0WX57 530 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 GNL2Q13823 731 aaKnown RBP7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 SAFBQ15424 915 aaKnown RBP eCLIP7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 PKN1Q16512 942 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 QRICH1Q2TAL8 776 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 WDR78Q5VTH9 848 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 PPP1R18Q6NYC8 613 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 SAMD1Q6SPF0 538 aaPredicted RBP7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 PRPF38AQ8NAV1 312 aaKnown RBP7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 GPRC5AQ8NFJ5 357 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 FBXO18Q8NFZ0 1043 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 USP6NLQ92738 828 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 MTMR8Q96EF0 704 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 AIFM3Q96NN9 605 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 GUCD1Q96NT3 240 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 PIGSQ96S52 555 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 SENP6Q9GZR1 1112 aaPredicted RBP7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 JMJD4Q9H9V9 463 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 VAT1LQ9HCJ6 419 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 SH3GLB2Q9NR46 395 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 BARHL2Q9NY43 387 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 VPS54Q9P1Q0 977 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 BTBD7Q9P203 1132 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 PNMA2Q9UL42 364 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 PPP1R9AQ9ULJ8 1098 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 PRR12Q9ULL5 1215 aa7.79□□□□□ -1.16
RNU1-55P-201ENST00000365510 BAZ2BQ9UIF8 2168 aaKnown RBP7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 MYH6P13533 1939 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 LAMA3Q16787 3333 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 ZBED4O75132 1171 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 BRD1O95696 1058 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 MYCNP04198 464 aaPredicted RBP7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 ZSCAN22P10073 491 aaPredicted RBP7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 COL6A1P12109 1028 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 CALML3P27482 149 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 CNGA1P29973 690 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 CYP2C19P33261 490 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 GCLCP48506 637 aaPredicted RBP7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 SLC35G1Q2M3R5 365 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 C9orf50Q5SZB4 431 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 MORN1Q5T089 497 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 GJC2Q5T442 439 aaPredicted RBP7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 MAP3K21Q5TCX8 1036 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 KRT40Q6A162 431 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 WWC2Q6AWC2 1192 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 MCTP1Q6DN14 999 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 GALNT17Q6IS24 598 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 CATSPERGQ6ZRH7 1159 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 GPR142Q7Z601 462 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 SH3RF1Q7Z6J0 888 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 FBXO11Q86XK2 927 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 GPKOWQ92917 476 aaPredicted RBP eCLIP7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 NUDT12Q9BQG2 462 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 AMNQ9BXJ7 453 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 RANBP17Q9H2T7 1088 aaKnown RBP7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 FBXO28Q9NVF7 368 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 MORF4L1Q9UBU8 362 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 PNMA3Q9UL41 463 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 MTMR6Q9Y217 621 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 ATP6V1DQ9Y5K8 247 aa7.78□□□□□ -1.16
RNU1-55P-201ENST00000365510 ESYT2A0FGR8 921 aa7.77□□□□□ -1.17
RNU1-55P-201ENST00000365510 STXBP3O00186 592 aa7.77□□□□□ -1.17
RNU1-55P-201ENST00000365510 F13A1P00488 732 aa7.77□□□□□ -1.17
RNU1-55P-201ENST00000365510 MMP1P03956 469 aa7.77□□□□□ -1.17
RNU1-55P-201ENST00000365510 ICAM1P05362 532 aa7.77□□□□□ -1.17
RNU1-55P-201ENST00000365510 GNA11P29992 359 aa7.77□□□□□ -1.17
RNU1-55P-201ENST00000365510 HOXA7P31268 230 aaPredicted RBP7.77□□□□□ -1.17
RNU1-55P-201ENST00000365510 KRT2P35908 639 aa7.77□□□□□ -1.17
RNU1-55P-201ENST00000365510 NLRP5P59047 1200 aa7.77□□□□□ -1.17
RNU1-55P-201ENST00000365510 ERVK-9P63128 1117 aa7.77□□□□□ -1.17
RNU1-55P-201ENST00000365510 ERVK-24P63145 666 aa7.77□□□□□ -1.17
RNU1-55P-201ENST00000365510 GUCY1B3Q02153 619 aa7.77□□□□□ -1.17
RNU1-55P-201ENST00000365510 PKP1Q13835 747 aa7.77□□□□□ -1.17
RNU1-55P-201ENST00000365510 COG2Q14746 738 aa7.77□□□□□ -1.17
RNU1-55P-201ENST00000365510 SHHQ15465 462 aa7.77□□□□□ -1.17
RNU1-55P-201ENST00000365510 CCDC174Q6PII3 467 aa7.77□□□□□ -1.17
RNU1-55P-201ENST00000365510 BRAPQ7Z569 592 aa7.77□□□□□ -1.17
RNU1-55P-201ENST00000365510 PLEKHH3Q7Z736 793 aa7.77□□□□□ -1.17
RNU1-55P-201ENST00000365510 TDHQ8IZJ6 230 aa7.77□□□□□ -1.17
RNU1-55P-201ENST00000365510 MB21D1Q8N884 522 aa7.77□□□□□ -1.17
RNU1-55P-201ENST00000365510 BICD2Q8TD16 824 aa7.77□□□□□ -1.17
RNU1-55P-201ENST00000365510 GTF3C2Q8WUA4 911 aaPredicted RBP7.77□□□□□ -1.17
RNU1-55P-201ENST00000365510 FERMT2Q96AC1 680 aa7.77□□□□□ -1.17
RNU1-55P-201ENST00000365510 GLT8D2Q9H1C3 349 aa7.77□□□□□ -1.17
RNU1-55P-201ENST00000365510 SLC38A10Q9HBR0 1119 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms