RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 PNLIPP16233 465 aa5.18□□□□□ -1.58
RNU4-1-201ENST00000363925 GFRA1P56159 465 aa5.18□□□□□ -1.58
RNU4-1-201ENST00000363925 SERINC3Q13530 473 aa5.18□□□□□ -1.58
RNU4-1-201ENST00000363925 CCDC144BQ3MJ40 725 aa5.18□□□□□ -1.58
RNU4-1-201ENST00000363925 NLRX1Q86UT6 975 aa5.18□□□□□ -1.58
RNU4-1-201ENST00000363925 TMEM145Q8NBT3 493 aa5.18□□□□□ -1.58
RNU4-1-201ENST00000363925 CCDC140Q96MF4 163 aa5.18□□□□□ -1.58
RNU4-1-201ENST00000363925 SLC38A3Q99624 504 aa5.18□□□□□ -1.58
RNU4-1-201ENST00000363925 KCNK12Q9HB15 430 aa5.18□□□□□ -1.58
RNU4-1-201ENST00000363925 MARCH2Q9P0N8 246 aa5.18□□□□□ -1.58
RNU4-1-201ENST00000363925 CDK11AQ9UQ88 783 aaPredicted RBP5.18□□□□□ -1.58
RNU4-1-201ENST00000363925 MSRB2Q9Y3D2 182 aa5.18□□□□□ -1.58
RNU4-1-201ENST00000363925 BLACEA4D250 179 aa5.17□□□□□ -1.58
RNU4-1-201ENST00000363925 MPOP05164 745 aa5.17□□□□□ -1.58
RNU4-1-201ENST00000363925 MSL3P1P0C860 447 aa5.17□□□□□ -1.58
RNU4-1-201ENST00000363925 RPL11P62913 178 aaKnown RBP5.17□□□□□ -1.58
RNU4-1-201ENST00000363925 MVKQ03426 396 aa5.17□□□□□ -1.58
RNU4-1-201ENST00000363925 RASA3Q14644 834 aa5.17□□□□□ -1.58
RNU4-1-201ENST00000363925 LZTR1Q8N653 840 aa5.17□□□□□ -1.58
RNU4-1-201ENST00000363925 FRS2Q8WU20 508 aa5.17□□□□□ -1.58
RNU4-1-201ENST00000363925 COPS5Q92905 334 aa5.17□□□□□ -1.58
RNU4-1-201ENST00000363925 SP110Q9HB58 689 aa5.17□□□□□ -1.58
RNU4-1-201ENST00000363925 RXFP1Q9HBX9 757 aa5.17□□□□□ -1.58
RNU4-1-201ENST00000363925 CRTAC1Q9NQ79 661 aa5.17□□□□□ -1.58
RNU4-1-201ENST00000363925 PDLIM7Q9NR12 457 aa5.17□□□□□ -1.58
RNU4-1-201ENST00000363925 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.17□□□□□ -1.58
RNU4-1-201ENST00000363925 PCDHA2Q9Y5H9 948 aa5.17□□□□□ -1.58
RNU4-1-201ENST00000363925 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.17□□□□□ -1.58
RNU4-1-201ENST00000363925 C7orf72A4D263 438 aa5.16□□□□□ -1.58
RNU4-1-201ENST00000363925 NOTOA8MTQ0 251 aa5.16□□□□□ -1.58
RNU4-1-201ENST00000363925 FARP2O94887 1054 aaPredicted RBP5.16□□□□□ -1.58
RNU4-1-201ENST00000363925 PABPC1P11940 636 aaKnown RBP5.16□□□□□ -1.58
RNU4-1-201ENST00000363925 KCNAB2Q13303 367 aa5.16□□□□□ -1.58
RNU4-1-201ENST00000363925 INF2Q27J81 1249 aa5.16□□□□□ -1.58
RNU4-1-201ENST00000363925 YOD1Q5VVQ6 348 aaPredicted RBP5.16□□□□□ -1.58
RNU4-1-201ENST00000363925 IQCEQ6IPM2 695 aa5.16□□□□□ -1.58
RNU4-1-201ENST00000363925 DPH6Q7L8W6 267 aa5.16□□□□□ -1.58
RNU4-1-201ENST00000363925 IRF2BP1Q8IU81 584 aa5.16□□□□□ -1.58
RNU4-1-201ENST00000363925 TEX2Q8IWB9 1127 aa5.16□□□□□ -1.58
RNU4-1-201ENST00000363925 MKL1Q969V6 931 aa5.16□□□□□ -1.58
RNU4-1-201ENST00000363925 ARHGEF4Q9NR80 690 aa5.16□□□□□ -1.58
RNU4-1-201ENST00000363925 TMEFF2Q9UIK5 374 aaPredicted RBP5.16□□□□□ -1.58
RNU4-1-201ENST00000363925 ACSL6Q9UKU0 697 aa5.16□□□□□ -1.58
RNU4-1-201ENST00000363925 TIMM13Q9Y5L4 95 aaPredicted RBP5.16□□□□□ -1.58
RNU4-1-201ENST00000363925 TRBV23-1A0A0A0MS06 115 aa5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 DLX3O60479 287 aa5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 EFEMP2O95967 443 aa5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 APPP05067 770 aa5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 FAM153BP0C7A2 387 aa5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 LCP1P13796 627 aa5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 LTBRP36941 435 aa5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 BCL6P41182 706 aa5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 SRSF3P84103 164 aaKnown RBP5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 TMEM62Q0P6H9 643 aa5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 MAP4K2Q12851 820 aa5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 PKN1Q16512 942 aa5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 FAM209AQ5JX71 171 aa5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 E4F1Q66K89 784 aaPredicted RBP5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 OLFML2BQ68BL8 750 aa5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 MBLAC2Q68D91 279 aa5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 SYDE1Q6ZW31 735 aaPredicted RBP5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 CEP68Q76N32 757 aa5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 FBXO15Q8NCQ5 510 aaPredicted RBP5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 NPLOC4Q8TAT6 608 aa5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 SHISA4Q96DD7 197 aa5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 TRMT2BQ96GJ1 504 aaKnown RBP5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 MMP19Q99542 508 aa5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 PHF20Q9BVI0 1012 aa5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 SIRT5Q9NXA8 310 aa5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 COA3Q9Y2R0 106 aaPredicted RBP5.15□□□□□ -1.59
RNU4-1-201ENST00000363925 ZC3H12DA2A288 527 aaKnown RBP5.14□□□□□ -1.59
RNU4-1-201ENST00000363925 F8W031 263 aaPredicted RBP5.14□□□□□ -1.59
RNU4-1-201ENST00000363925 TMEM253P0C7T8 217 aa5.14□□□□□ -1.59
RNU4-1-201ENST00000363925 FPR2P25090 351 aa5.14□□□□□ -1.59
RNU4-1-201ENST00000363925 ZNF648Q5T619 568 aaPredicted RBP5.14□□□□□ -1.59
RNU4-1-201ENST00000363925 OGFOD2Q6N063 350 aa5.14□□□□□ -1.59
RNU4-1-201ENST00000363925 TMC6Q7Z403 805 aa5.14□□□□□ -1.59
RNU4-1-201ENST00000363925 LRP10Q7Z4F1 713 aa5.14□□□□□ -1.59
RNU4-1-201ENST00000363925 ZBTB38Q8NAP3 1195 aaPredicted RBP5.14□□□□□ -1.59
RNU4-1-201ENST00000363925 KCNN1Q92952 543 aa5.14□□□□□ -1.59
RNU4-1-201ENST00000363925 ZNF669Q96BR6 464 aaPredicted RBP5.14□□□□□ -1.59
RNU4-1-201ENST00000363925 TMEM169Q96HH4 297 aa5.14□□□□□ -1.59
RNU4-1-201ENST00000363925 CLDND1Q9NY35 253 aa5.14□□□□□ -1.59
RNU4-1-201ENST00000363925 C22orf46C9J442 243 aa5.13□□□□□ -1.59
RNU4-1-201ENST00000363925 SCG5P05408 212 aa5.13□□□□□ -1.59
RNU4-1-201ENST00000363925 FGFR1P11362 822 aa5.13□□□□□ -1.59
RNU4-1-201ENST00000363925 TXKP42681 527 aa5.13□□□□□ -1.59
RNU4-1-201ENST00000363925 CEBPAP49715 358 aaPredicted RBP5.13□□□□□ -1.59
RNU4-1-201ENST00000363925 CORO7P57737 925 aa5.13□□□□□ -1.59
RNU4-1-201ENST00000363925 SUMO1P63165 101 aaKnown RBP5.13□□□□□ -1.59
RNU4-1-201ENST00000363925 CYP4F3Q08477 520 aa5.13□□□□□ -1.59
RNU4-1-201ENST00000363925 FOXB2Q5VYV0 432 aa5.13□□□□□ -1.59
RNU4-1-201ENST00000363925 ZC3H14Q6PJT7 736 aaKnown RBP5.13□□□□□ -1.59
RNU4-1-201ENST00000363925 KCNT2Q6UVM3 1135 aa5.13□□□□□ -1.59
RNU4-1-201ENST00000363925 MTDHQ86UE4 582 aaKnown RBP5.13□□□□□ -1.59
RNU4-1-201ENST00000363925 CCDC103Q8IW40 242 aa5.13□□□□□ -1.59
RNU4-1-201ENST00000363925 SCUBE1Q8IWY4 988 aa5.13□□□□□ -1.59
RNU4-1-201ENST00000363925 KREMEN2Q8NCW0 462 aa5.13□□□□□ -1.59
RNU4-1-201ENST00000363925 RCBTB1Q8NDN9 531 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms