RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 C6orf50Q9HD87 102 aa19.76■□□□□ 0.75
GYPC-202ENST00000356887 AGPAT5Q9NUQ2 364 aa19.76■□□□□ 0.75
GYPC-202ENST00000356887 SMARCA1P28370 1054 aa19.75■□□□□ 0.75
GYPC-202ENST00000356887 GNA11P29992 359 aa19.75■□□□□ 0.75
GYPC-202ENST00000356887 PPP1R2P41236 205 aa19.75■□□□□ 0.75
GYPC-202ENST00000356887 TBC1D8BQ0IIM8 1120 aa19.75■□□□□ 0.75
GYPC-202ENST00000356887 C15orf52Q6ZUT6 534 aaKnown RBP19.75■□□□□ 0.75
GYPC-202ENST00000356887 C16orf86Q6ZW13 317 aa19.75■□□□□ 0.75
GYPC-202ENST00000356887 ZNF804AQ7Z570 1209 aa19.75■□□□□ 0.75
GYPC-202ENST00000356887 FAM114A1Q8IWE2 563 aa19.75■□□□□ 0.75
GYPC-202ENST00000356887 TXLNBQ8N3L3 684 aa19.75■□□□□ 0.75
GYPC-202ENST00000356887 ARHGEF1Q92888 912 aaKnown RBP19.75■□□□□ 0.75
GYPC-202ENST00000356887 EYA3Q99504 573 aa19.75■□□□□ 0.75
GYPC-202ENST00000356887 GBP3Q9H0R5 595 aa19.75■□□□□ 0.75
GYPC-202ENST00000356887 SNED1Q8TER0 1413 aa19.75■□□□□ 0.75
GYPC-202ENST00000356887 IRX3P78415 501 aaPredicted RBP19.75■□□□□ 0.75
GYPC-202ENST00000356887 ZBED6P86452 979 aa19.75■□□□□ 0.75
GYPC-202ENST00000356887 COBLL1Q53SF7 1204 aa19.75■□□□□ 0.75
GYPC-202ENST00000356887 CCDC122Q5T0U0 273 aa19.75■□□□□ 0.75
GYPC-202ENST00000356887 PAPD7Q5XG87 772 aaKnown RBP19.75■□□□□ 0.75
GYPC-202ENST00000356887 NEK8Q86SG6 692 aa19.75■□□□□ 0.75
GYPC-202ENST00000356887 AMIGO3Q86WK7 504 aa19.75■□□□□ 0.75
GYPC-202ENST00000356887 CNOT6LQ96LI5 555 aaKnown RBP19.75■□□□□ 0.75
GYPC-202ENST00000356887 MMTAG2Q9BU76 263 aaKnown RBP19.75■□□□□ 0.75
GYPC-202ENST00000356887 PDE11AQ9HCR9 933 aa19.75■□□□□ 0.75
GYPC-202ENST00000356887 LRRC4BQ9NT99 713 aa19.75■□□□□ 0.75
GYPC-202ENST00000356887 RTCBQ9Y3I0 505 aaKnown RBP19.75■□□□□ 0.75
GYPC-202ENST00000356887 KLK7P49862 253 aa19.74■□□□□ 0.75
GYPC-202ENST00000356887 ASIC1P78348 528 aa19.74■□□□□ 0.75
GYPC-202ENST00000356887 MCM6Q14566 821 aa19.74■□□□□ 0.75
GYPC-202ENST00000356887 NFIXQ14938 502 aa19.74■□□□□ 0.75
GYPC-202ENST00000356887 MIIPQ5JXC2 388 aa19.74■□□□□ 0.75
GYPC-202ENST00000356887 WDR93Q6P2C0 686 aa19.74■□□□□ 0.75
GYPC-202ENST00000356887 CERS3Q8IU89 383 aa19.74■□□□□ 0.75
GYPC-202ENST00000356887 ZSCAN29Q8IWY8 852 aaPredicted RBP19.74■□□□□ 0.75
GYPC-202ENST00000356887 RRP36Q96EU6 259 aaKnown RBP19.74■□□□□ 0.75
GYPC-202ENST00000356887 TFR2Q9UP52 801 aa19.74■□□□□ 0.75
GYPC-202ENST00000356887 FCER1AP12319 257 aa19.74■□□□□ 0.75
GYPC-202ENST00000356887 CYLC1P35663 651 aaPredicted RBP19.74■□□□□ 0.75
GYPC-202ENST00000356887 TECP42680 631 aa19.74■□□□□ 0.75
GYPC-202ENST00000356887 AMPD3Q01432 767 aa19.74■□□□□ 0.75
GYPC-202ENST00000356887 GPS2Q13227 327 aa19.74■□□□□ 0.75
GYPC-202ENST00000356887 USP17L2Q6R6M4 530 aa19.74■□□□□ 0.75
GYPC-202ENST00000356887 CCDC170Q8IYT3 715 aa19.74■□□□□ 0.75
GYPC-202ENST00000356887 ZNHIT6Q9NWK9 470 aaKnown RBP19.74■□□□□ 0.75
GYPC-202ENST00000356887 PSD3Q9NYI0 1048 aa19.74■□□□□ 0.75
GYPC-202ENST00000356887 BCCIPQ9P287 314 aaKnown RBP eCLIP19.74■□□□□ 0.75
GYPC-202ENST00000356887 HDAC6Q9UBN7 1215 aa19.74■□□□□ 0.75
GYPC-202ENST00000356887 GPR75-ASB3A0A0A6YYF3 556 aa19.73■□□□□ 0.75
GYPC-202ENST00000356887 EIF3CLB5ME19 914 aaKnown RBP19.73■□□□□ 0.75
GYPC-202ENST00000356887 ATP1A1P05023 1023 aaKnown RBP19.73■□□□□ 0.75
GYPC-202ENST00000356887 TRIM21P19474 475 aaKnown RBP19.73■□□□□ 0.75
GYPC-202ENST00000356887 BTDP43251 543 aa19.73■□□□□ 0.75
GYPC-202ENST00000356887 HNRNPH2P55795 449 aaKnown RBP19.73■□□□□ 0.75
GYPC-202ENST00000356887 ORC2Q13416 577 aaPredicted RBP19.73■□□□□ 0.75
GYPC-202ENST00000356887 NEK11Q8NG66 645 aa19.73■□□□□ 0.75
GYPC-202ENST00000356887 EXOC4Q96A65 974 aa19.73■□□□□ 0.75
GYPC-202ENST00000356887 JAKMIP2Q96AA8 810 aa19.73■□□□□ 0.75
GYPC-202ENST00000356887 GPR101Q96P66 508 aaPredicted RBP19.73■□□□□ 0.75
GYPC-202ENST00000356887 ERGIC2Q96RQ1 377 aa19.73■□□□□ 0.75
GYPC-202ENST00000356887 EIF3CQ99613 913 aaKnown RBP19.73■□□□□ 0.75
GYPC-202ENST00000356887 NHEJ1Q9H9Q4 299 aaPredicted RBP19.73■□□□□ 0.75
GYPC-202ENST00000356887 SUGCTQ9HAC7 445 aa19.73■□□□□ 0.75
GYPC-202ENST00000356887 ADAM21Q9UKJ8 722 aa19.73■□□□□ 0.75
GYPC-202ENST00000356887 CDK5RAP2Q96SN8 1893 aa19.73■□□□□ 0.75
GYPC-202ENST00000356887 A0A1W2PQJ5 194 aa19.72■□□□□ 0.75
GYPC-202ENST00000356887 ENC1O14682 589 aa19.72■□□□□ 0.75
GYPC-202ENST00000356887 MTIF2P46199 727 aaKnown RBP19.72■□□□□ 0.75
GYPC-202ENST00000356887 GYS2P54840 703 aa19.72■□□□□ 0.75
GYPC-202ENST00000356887 CDK17Q00537 523 aa19.72■□□□□ 0.75
GYPC-202ENST00000356887 FIGNQ5HY92 759 aa19.72■□□□□ 0.75
GYPC-202ENST00000356887 SOGA3Q5TF21 947 aa19.72■□□□□ 0.75
GYPC-202ENST00000356887 KIAA1328Q86T90 577 aa19.72■□□□□ 0.75
GYPC-202ENST00000356887 EHBP1Q8NDI1 1231 aa19.72■□□□□ 0.75
GYPC-202ENST00000356887 TBCKQ8TEA7 893 aa19.72■□□□□ 0.75
GYPC-202ENST00000356887 EEF2KMTQ96G04 330 aa19.72■□□□□ 0.75
GYPC-202ENST00000356887 SAR1BQ9Y6B6 198 aa19.72■□□□□ 0.75
GYPC-202ENST00000356887 DDX60LQ5H9U9 1706 aaKnown RBP19.72■□□□□ 0.75
GYPC-202ENST00000356887 RCCD1A6NED2 376 aa19.72■□□□□ 0.75
GYPC-202ENST00000356887 KRT86O43790 486 aa19.72■□□□□ 0.75
GYPC-202ENST00000356887 EIF3JO75822 258 aaKnown RBP19.72■□□□□ 0.75
GYPC-202ENST00000356887 NOVP48745 357 aa19.72■□□□□ 0.75
GYPC-202ENST00000356887 USP14P54578 494 aa19.72■□□□□ 0.75
GYPC-202ENST00000356887 CNNM4Q6P4Q7 775 aa19.72■□□□□ 0.75
GYPC-202ENST00000356887 PIGSQ96S52 555 aa19.72■□□□□ 0.75
GYPC-202ENST00000356887 NOC4LQ9BVI4 516 aaKnown RBP19.72■□□□□ 0.75
GYPC-202ENST00000356887 LACRTQ9GZZ8 138 aa19.72■□□□□ 0.75
GYPC-202ENST00000356887 SEMA6BQ9H3T3 888 aa19.72■□□□□ 0.75
GYPC-202ENST00000356887 ESYT2A0FGR8 921 aa19.71■□□□□ 0.75
GYPC-202ENST00000356887 CASP8Q14790 479 aa19.71■□□□□ 0.75
GYPC-202ENST00000356887 CENPPQ6IPU0 288 aa19.71■□□□□ 0.75
GYPC-202ENST00000356887 TEX11Q8IYF3 940 aa19.71■□□□□ 0.75
GYPC-202ENST00000356887 KIAA0895Q8NCT3 520 aa19.71■□□□□ 0.75
GYPC-202ENST00000356887 CALML4Q96GE6 196 aa19.71■□□□□ 0.75
GYPC-202ENST00000356887 SEC63Q9UGP8 760 aaKnown RBP19.71■□□□□ 0.75
GYPC-202ENST00000356887 TNS1Q9HBL0 1735 aaKnown RBP19.71■□□□□ 0.75
GYPC-202ENST00000356887 CEP95Q96GE4 821 aa19.71■□□□□ 0.75
GYPC-202ENST00000356887 MTMR9Q96QG7 549 aa19.71■□□□□ 0.75
GYPC-202ENST00000356887 PURBQ96QR8 312 aaKnown RBP19.71■□□□□ 0.75
GYPC-202ENST00000356887 MMS19Q96T76 1030 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms