RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 CST9Q5W186 159 aa17.75■□□□□ 0.43
CTSA-202ENST00000354880 CCDC73Q6ZRK6 1079 aa17.75■□□□□ 0.43
CTSA-202ENST00000354880 GPBP1L1Q9HC44 474 aaPredicted RBP17.75■□□□□ 0.43
CTSA-202ENST00000354880 AGTPBP1Q9UPW5 1226 aa17.75■□□□□ 0.43
CTSA-202ENST00000354880 MRVI1Q9Y6F6 885 aa17.75■□□□□ 0.43
CTSA-202ENST00000354880 MYH7BA7E2Y1 1941 aa17.75■□□□□ 0.43
CTSA-202ENST00000354880 TRPM7Q96QT4 1865 aa17.75■□□□□ 0.43
CTSA-202ENST00000354880 HOXA13P31271 388 aaPredicted RBP17.75■□□□□ 0.43
CTSA-202ENST00000354880 MOGSQ13724 837 aa17.75■□□□□ 0.43
CTSA-202ENST00000354880 C4orf32Q8N8J7 132 aa17.75■□□□□ 0.43
CTSA-202ENST00000354880 TBC1D5Q92609 795 aa17.75■□□□□ 0.43
CTSA-202ENST00000354880 FERMT2Q96AC1 680 aa17.75■□□□□ 0.43
CTSA-202ENST00000354880 P2RX7Q99572 595 aaKnown RBP17.75■□□□□ 0.43
CTSA-202ENST00000354880 GOLPH3LQ9H4A5 285 aa17.75■□□□□ 0.43
CTSA-202ENST00000354880 DACT1Q9NYF0 836 aa17.75■□□□□ 0.43
CTSA-202ENST00000354880 NR1I2O75469 434 aa17.74■□□□□ 0.43
CTSA-202ENST00000354880 ARL6IP4Q66PJ3 421 aaKnown RBP17.74■□□□□ 0.43
CTSA-202ENST00000354880 ZNF579Q8NAF0 562 aaKnown RBP17.74■□□□□ 0.43
CTSA-202ENST00000354880 CLEC4DQ8WXI8 215 aa17.74■□□□□ 0.43
CTSA-202ENST00000354880 ZNF214Q9UL59 606 aaPredicted RBP17.74■□□□□ 0.43
CTSA-202ENST00000354880 A0A1B0GVL5 298 aa17.73■□□□□ 0.43
CTSA-202ENST00000354880 LAD1O00515 517 aa17.73■□□□□ 0.43
CTSA-202ENST00000354880 ATP2A1O14983 1001 aa17.73■□□□□ 0.43
CTSA-202ENST00000354880 EDIL3O43854 480 aa17.73■□□□□ 0.43
CTSA-202ENST00000354880 NEMFO60524 1076 aa17.73■□□□□ 0.43
CTSA-202ENST00000354880 IRX3P78415 501 aaPredicted RBP17.73■□□□□ 0.43
CTSA-202ENST00000354880 FAM160A1Q05DH4 1040 aa17.73■□□□□ 0.43
CTSA-202ENST00000354880 TMEM132BQ14DG7 1078 aa17.73■□□□□ 0.43
CTSA-202ENST00000354880 SHC4Q6S5L8 630 aa17.73■□□□□ 0.43
CTSA-202ENST00000354880 MCF2L2Q86YR7 1114 aa17.73■□□□□ 0.43
CTSA-202ENST00000354880 HOMER2Q9NSB8 354 aa17.73■□□□□ 0.43
CTSA-202ENST00000354880 NFIBO00712 420 aa17.72■□□□□ 0.43
CTSA-202ENST00000354880 USP11P51784 963 aa17.72■□□□□ 0.43
CTSA-202ENST00000354880 GRIN1Q05586 938 aa17.72■□□□□ 0.43
CTSA-202ENST00000354880 PABPC4Q13310 644 aaKnown RBP eCLIP17.72■□□□□ 0.432e-8■■□□□ 11.5
CTSA-202ENST00000354880 CCDC183Q5T5S1 534 aa17.72■□□□□ 0.43
CTSA-202ENST00000354880 RESP18Q5W5W9 173 aa17.72■□□□□ 0.43
CTSA-202ENST00000354880 SNRNP48Q6IEG0 339 aaKnown RBP17.72■□□□□ 0.43
CTSA-202ENST00000354880 PPP4R3AQ6IN85 833 aa17.72■□□□□ 0.43
CTSA-202ENST00000354880 FCHSD1Q86WN1 690 aa17.72■□□□□ 0.43
CTSA-202ENST00000354880 ENGASEQ8NFI3 743 aa17.72■□□□□ 0.43
CTSA-202ENST00000354880 TRERF1Q96PN7 1200 aa17.72■□□□□ 0.43
CTSA-202ENST00000354880 NAP1L4Q99733 375 aaKnown RBP17.72■□□□□ 0.43
CTSA-202ENST00000354880 TEX13BQ9BXU2 312 aa17.72■□□□□ 0.43
CTSA-202ENST00000354880 TMEM60Q9H2L4 133 aa17.72■□□□□ 0.43
CTSA-202ENST00000354880 DDX19AQ9NUU7 478 aaKnown RBP17.72■□□□□ 0.43
CTSA-202ENST00000354880 SREBF1P36956 1147 aa17.72■□□□□ 0.43
CTSA-202ENST00000354880 HSD17B4P51659 736 aa17.72■□□□□ 0.43
CTSA-202ENST00000354880 NDUFA8P51970 172 aa17.72■□□□□ 0.43
CTSA-202ENST00000354880 GHRHRQ02643 423 aa17.72■□□□□ 0.43
CTSA-202ENST00000354880 SNW1Q13573 536 aaKnown RBP17.72■□□□□ 0.43
CTSA-202ENST00000354880 ZSCAN23Q3MJ62 389 aa17.72■□□□□ 0.43
CTSA-202ENST00000354880 MUM1L1Q5H9M0 696 aa17.72■□□□□ 0.43
CTSA-202ENST00000354880 LBX2Q6XYB7 198 aa17.72■□□□□ 0.43
CTSA-202ENST00000354880 SAMD3Q8N6K7 520 aa17.72■□□□□ 0.43
CTSA-202ENST00000354880 MB21D1Q8N884 522 aa17.72■□□□□ 0.43
CTSA-202ENST00000354880 CSRNP2Q9H175 543 aa17.72■□□□□ 0.43
CTSA-202ENST00000354880 ASCC2Q9H1I8 757 aaPredicted RBP17.72■□□□□ 0.43
CTSA-202ENST00000354880 VWA3AA6NCI4 1184 aa17.71■□□□□ 0.43
CTSA-202ENST00000354880 TDP2O95551 362 aa17.71■□□□□ 0.43
CTSA-202ENST00000354880 PFKFB1P16118 471 aa17.71■□□□□ 0.43
CTSA-202ENST00000354880 GCFC2P16383 781 aaKnown RBP17.71■□□□□ 0.43
CTSA-202ENST00000354880 GTF2A2P52657 109 aa17.71■□□□□ 0.43
CTSA-202ENST00000354880 HUNKP57058 714 aa17.71■□□□□ 0.43
CTSA-202ENST00000354880 ARHGAP4P98171 946 aa17.71■□□□□ 0.43
CTSA-202ENST00000354880 GPAT2Q6NUI2 795 aa17.71■□□□□ 0.43
CTSA-202ENST00000354880 CRYGNQ8WXF5 182 aa17.71■□□□□ 0.43
CTSA-202ENST00000354880 RNF146Q9NTX7 359 aa17.71■□□□□ 0.43
CTSA-202ENST00000354880 MAP3K20Q9NYL2 800 aaKnown RBP17.71■□□□□ 0.43
CTSA-202ENST00000354880 RIPK3Q9Y572 518 aa17.71■□□□□ 0.43
CTSA-202ENST00000354880 FAM237AA0A1B0GTK4 181 aa17.7■□□□□ 0.42
CTSA-202ENST00000354880 OR52Z1P0C646 297 aa17.7■□□□□ 0.42
CTSA-202ENST00000354880 CETPP11597 493 aa17.7■□□□□ 0.42
CTSA-202ENST00000354880 OSBPP22059 807 aa17.7■□□□□ 0.42
CTSA-202ENST00000354880 STAT3P40763 770 aa17.7■□□□□ 0.42
CTSA-202ENST00000354880 PRPHP41219 470 aa17.7■□□□□ 0.42
CTSA-202ENST00000354880 HERVK_113P62684 666 aa17.7■□□□□ 0.42
CTSA-202ENST00000354880 SPECC1Q5M775 1068 aa17.7■□□□□ 0.42
CTSA-202ENST00000354880 FMR1NBQ8N0W7 255 aaPredicted RBP17.7■□□□□ 0.42
CTSA-202ENST00000354880 MS4A4AQ96JQ5 239 aa17.7■□□□□ 0.42
CTSA-202ENST00000354880 EHMT1Q9H9B1 1298 aa17.7■□□□□ 0.42
CTSA-202ENST00000354880 A0A0G2JMZ2 1700 aa17.7■□□□□ 0.42
CTSA-202ENST00000354880 ZBTB48P10074 688 aaPredicted RBP17.7■□□□□ 0.42
CTSA-202ENST00000354880 PLS1Q14651 629 aa17.7■□□□□ 0.42
CTSA-202ENST00000354880 TKFCQ3LXA3 575 aa17.7■□□□□ 0.42
CTSA-202ENST00000354880 SPRYD7Q5W111 196 aa17.7■□□□□ 0.42
CTSA-202ENST00000354880 MOXD1Q6UVY6 613 aa17.7■□□□□ 0.42
CTSA-202ENST00000354880 DTHD1Q6ZMT9 781 aa17.7■□□□□ 0.42
CTSA-202ENST00000354880 POTEDQ86YR6 584 aa17.7■□□□□ 0.42
CTSA-202ENST00000354880 NUP62CLQ9H1M0 184 aa17.7■□□□□ 0.42
CTSA-202ENST00000354880 FAM13BQ9NYF5 915 aa17.7■□□□□ 0.42
CTSA-202ENST00000354880 HPSEQ9Y251 543 aa17.7■□□□□ 0.42
CTSA-202ENST00000354880 RBBP6Q7Z6E9 1792 aaKnown RBP17.69■□□□□ 0.42
CTSA-202ENST00000354880 SLC37A4O43826 429 aa17.69■□□□□ 0.42
CTSA-202ENST00000354880 KINO60870 393 aaKnown RBP17.69■□□□□ 0.42
CTSA-202ENST00000354880 MKRN3Q13064 507 aaKnown RBP17.69■□□□□ 0.42
CTSA-202ENST00000354880 IL17AQ16552 155 aa17.69■□□□□ 0.42
CTSA-202ENST00000354880 POTEEQ6S8J3 1075 aa17.69■□□□□ 0.42
CTSA-202ENST00000354880 DDX25Q9UHL0 483 aaKnown RBP17.69■□□□□ 0.42
CTSA-202ENST00000354880 PASKQ96RG2 1323 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms