RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 F5H6K3 240 aa17.49■□□□□ 0.39
MBD1-205ENST00000353909 RNF225M0QZC1 329 aaPredicted RBP17.49■□□□□ 0.39
MBD1-205ENST00000353909 RHOBTB3O94955 611 aa17.49■□□□□ 0.39
MBD1-205ENST00000353909 GH2P01242 217 aa17.49■□□□□ 0.39
MBD1-205ENST00000353909 KLRC3Q07444 240 aa17.49■□□□□ 0.39
MBD1-205ENST00000353909 DEFB132Q7Z7B7 95 aa17.49■□□□□ 0.39
MBD1-205ENST00000353909 REXO1L1PQ8IX06 675 aa17.49■□□□□ 0.39
MBD1-205ENST00000353909 CUL5Q93034 780 aa17.49■□□□□ 0.39
MBD1-205ENST00000353909 PNMA5Q96PV4 448 aa17.49■□□□□ 0.39
MBD1-205ENST00000353909 P2RX7Q99572 595 aaKnown RBP17.49■□□□□ 0.39
MBD1-205ENST00000353909 DESI2Q9BSY9 194 aa17.49■□□□□ 0.39
MBD1-205ENST00000353909 BLOC1S4Q9NUP1 217 aa17.49■□□□□ 0.39
MBD1-205ENST00000353909 NYAP2Q9P242 653 aa17.49■□□□□ 0.39
MBD1-205ENST00000353909 PCDHA1Q9Y5I3 950 aa17.49■□□□□ 0.39
MBD1-205ENST00000353909 ABCB5Q2M3G0 1257 aa17.48■□□□□ 0.39
MBD1-205ENST00000353909 TCP11X2Q5H9J9 407 aa17.48■□□□□ 0.39
MBD1-205ENST00000353909 CDAN1Q8IWY9 1227 aa17.48■□□□□ 0.39
MBD1-205ENST00000353909 GIMAP8Q8ND71 665 aaPredicted RBP17.48■□□□□ 0.39
MBD1-205ENST00000353909 HAS1Q92839 578 aa17.48■□□□□ 0.39
MBD1-205ENST00000353909 CSRNP1Q96S65 589 aa17.48■□□□□ 0.39
MBD1-205ENST00000353909 ZNF277Q9NRM2 450 aaPredicted RBP17.48■□□□□ 0.39
MBD1-205ENST00000353909 C10orf71Q711Q0 1435 aa17.48■□□□□ 0.39
MBD1-205ENST00000353909 A0A1W2PRG0 241 aa17.48■□□□□ 0.39
MBD1-205ENST00000353909 KCNJ18B7U540 433 aa17.48■□□□□ 0.39
MBD1-205ENST00000353909 N4BP3O15049 544 aa17.48■□□□□ 0.39
MBD1-205ENST00000353909 KCNJ12Q14500 433 aa17.48■□□□□ 0.39
MBD1-205ENST00000353909 KCNB1Q14721 858 aa17.48■□□□□ 0.39
MBD1-205ENST00000353909 CDC37Q16543 378 aaPredicted RBP17.48■□□□□ 0.39
MBD1-205ENST00000353909 KCNK18Q7Z418 384 aa17.48■□□□□ 0.39
MBD1-205ENST00000353909 SPICE1Q8N0Z3 855 aa17.48■□□□□ 0.39
MBD1-205ENST00000353909 LIMA1Q9UHB6 759 aaKnown RBP17.48■□□□□ 0.39
MBD1-205ENST00000353909 COL4A5P29400 1685 aa17.48■□□□□ 0.39
MBD1-205ENST00000353909 LRRC10BA6NIK2 292 aa17.48■□□□□ 0.39
MBD1-205ENST00000353909 ARHGAP6O43182 974 aa17.48■□□□□ 0.39
MBD1-205ENST00000353909 CASP14P31944 242 aa17.48■□□□□ 0.39
MBD1-205ENST00000353909 FXR1P51114 621 aaKnown RBP eCLIP17.48■□□□□ 0.39
MBD1-205ENST00000353909 ASIC1P78348 528 aa17.48■□□□□ 0.39
MBD1-205ENST00000353909 ECM1Q16610 540 aa17.48■□□□□ 0.39
MBD1-205ENST00000353909 NKRFO15226 690 aaKnown RBP eCLIP17.47■□□□□ 0.39
MBD1-205ENST00000353909 GYPCP04921 128 aa17.47■□□□□ 0.39
MBD1-205ENST00000353909 COPB1P53618 953 aaKnown RBP17.47■□□□□ 0.39
MBD1-205ENST00000353909 PDE4DQ08499 809 aa17.47■□□□□ 0.39
MBD1-205ENST00000353909 MCM6Q14566 821 aa17.47■□□□□ 0.39
MBD1-205ENST00000353909 KIF18AQ8NI77 898 aa17.47■□□□□ 0.39
MBD1-205ENST00000353909 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.47■□□□□ 0.39
MBD1-205ENST00000353909 PPP2R2CQ9Y2T4 447 aa17.47■□□□□ 0.39
MBD1-205ENST00000353909 SOWAHDA6NJG2 315 aa17.47■□□□□ 0.39
MBD1-205ENST00000353909 NDUFB10O96000 172 aa17.47■□□□□ 0.39
MBD1-205ENST00000353909 MRPL12P52815 198 aaKnown RBP17.47■□□□□ 0.39
MBD1-205ENST00000353909 TRIM65Q6PJ69 517 aa17.47■□□□□ 0.39
MBD1-205ENST00000353909 TMEM179Q6ZVK1 233 aa17.47■□□□□ 0.39
MBD1-205ENST00000353909 CTAGE1Q96RT6 745 aa17.47■□□□□ 0.39
MBD1-205ENST00000353909 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.47■□□□□ 0.39
MBD1-205ENST00000353909 DDX25Q9UHL0 483 aaKnown RBP17.47■□□□□ 0.39
MBD1-205ENST00000353909 V9GYY5 206 aaPredicted RBP17.47■□□□□ 0.39
MBD1-205ENST00000353909 AKR1B15C9JRZ8 316 aaPredicted RBP17.46■□□□□ 0.39
MBD1-205ENST00000353909 PSMD14O00487 310 aa17.46■□□□□ 0.39
MBD1-205ENST00000353909 STX10O60499 249 aa17.46■□□□□ 0.39
MBD1-205ENST00000353909 FXR2P51116 673 aaKnown RBP eCLIP17.46■□□□□ 0.39
MBD1-205ENST00000353909 PPP1R18Q6NYC8 613 aa17.46■□□□□ 0.39
MBD1-205ENST00000353909 DYMQ7RTS9 669 aa17.46■□□□□ 0.39
MBD1-205ENST00000353909 SRRTQ9BXP5 876 aaKnown RBP17.46■□□□□ 0.39
MBD1-205ENST00000353909 ZNF215Q9UL58 517 aaPredicted RBP17.46■□□□□ 0.39
MBD1-205ENST00000353909 ATF5Q9Y2D1 282 aaPredicted RBP17.46■□□□□ 0.39
MBD1-205ENST00000353909 A0A0U1RQJ8 604 aa17.46■□□□□ 0.39
MBD1-205ENST00000353909 RRP9O43818 475 aaKnown RBP17.46■□□□□ 0.39
MBD1-205ENST00000353909 ECE1P42892 770 aa17.46■□□□□ 0.39
MBD1-205ENST00000353909 NCBP1Q09161 790 aaKnown RBP17.46■□□□□ 0.39
MBD1-205ENST00000353909 USH1GQ495M9 461 aa17.46■□□□□ 0.39
MBD1-205ENST00000353909 FILIP1LQ4L180 1135 aa17.46■□□□□ 0.39
MBD1-205ENST00000353909 ATRIPQ8WXE1 791 aa17.46■□□□□ 0.39
MBD1-205ENST00000353909 CALML4Q96GE6 196 aa17.46■□□□□ 0.39
MBD1-205ENST00000353909 MYMKA6NI61 221 aa17.45■□□□□ 0.38
MBD1-205ENST00000353909 KCNA3P22001 575 aa17.45■□□□□ 0.38
MBD1-205ENST00000353909 CC2D2BQ6DHV5 1058 aa17.45■□□□□ 0.38
MBD1-205ENST00000353909 PPP4R3AQ6IN85 833 aa17.45■□□□□ 0.38
MBD1-205ENST00000353909 TTI2Q6NXR4 508 aa17.45■□□□□ 0.38
MBD1-205ENST00000353909 DCAF4Q8WV16 495 aa17.45■□□□□ 0.38
MBD1-205ENST00000353909 C7orf25Q9BPX7 421 aa17.45■□□□□ 0.38
MBD1-205ENST00000353909 CUEDC2Q9H467 287 aa17.45■□□□□ 0.38
MBD1-205ENST00000353909 SCAF8Q9UPN6 1271 aaKnown RBP17.45■□□□□ 0.38
MBD1-205ENST00000353909 SRCAPQ6ZRS2 3230 aa17.45■□□□□ 0.38
MBD1-205ENST00000353909 ATRNL1Q5VV63 1379 aa17.45■□□□□ 0.38
MBD1-205ENST00000353909 MEIS2O14770 477 aa17.45■□□□□ 0.38
MBD1-205ENST00000353909 NPM3O75607 178 aaKnown RBP17.45■□□□□ 0.38
MBD1-205ENST00000353909 MYL1P05976 194 aa17.45■□□□□ 0.38
MBD1-205ENST00000353909 TTLL6Q8N841 843 aa17.45■□□□□ 0.38
MBD1-205ENST00000353909 KIAA0895Q8NCT3 520 aa17.45■□□□□ 0.38
MBD1-205ENST00000353909 LRRN4CLQ8ND94 238 aa17.45■□□□□ 0.38
MBD1-205ENST00000353909 SNX29Q8TEQ0 813 aa17.45■□□□□ 0.38
MBD1-205ENST00000353909 DUSP9Q99956 384 aaKnown RBP17.45■□□□□ 0.38
MBD1-205ENST00000353909 DNAI1Q9UI46 699 aa17.45■□□□□ 0.38
MBD1-205ENST00000353909 DPEP1P16444 411 aa17.44■□□□□ 0.38
MBD1-205ENST00000353909 IKQ13123 557 aaPredicted RBP17.44■□□□□ 0.38
MBD1-205ENST00000353909 ORC2Q13416 577 aaPredicted RBP17.44■□□□□ 0.38
MBD1-205ENST00000353909 KIAA1755Q5JYT7 1200 aa17.44■□□□□ 0.38
MBD1-205ENST00000353909 RAD9BQ6WBX8 426 aa17.44■□□□□ 0.38
MBD1-205ENST00000353909 PPFIBP1Q86W92 1011 aa17.44■□□□□ 0.38
MBD1-205ENST00000353909 TRIM47Q96LD4 638 aa17.44■□□□□ 0.38
MBD1-205ENST00000353909 SLC39A2Q9NP94 309 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms