RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 GOLGA8NF8WBI6 632 aa25.22■■□□□ 1.63
NPAS3-201ENST00000346562 SDCCAG3Q96C92 435 aa25.22■■□□□ 1.63
NPAS3-201ENST00000346562 LEMD3Q9Y2U8 911 aa25.22■■□□□ 1.63
NPAS3-201ENST00000346562 SNX25Q9H3E2 840 aa25.22■■□□□ 1.63
NPAS3-201ENST00000346562 PCDHB4Q9Y5E5 795 aa25.22■■□□□ 1.63
NPAS3-201ENST00000346562 GAP43P17677 238 aa25.22■■□□□ 1.63
NPAS3-201ENST00000346562 BRD3Q15059 726 aa25.22■■□□□ 1.63
NPAS3-201ENST00000346562 DBN1Q16643 649 aa25.22■■□□□ 1.63
NPAS3-201ENST00000346562 CCDC93Q567U6 631 aa25.22■■□□□ 1.63
NPAS3-201ENST00000346562 LRCH2Q5VUJ6 765 aa25.22■■□□□ 1.63
NPAS3-201ENST00000346562 PHLDB3Q6NSJ2 640 aa25.22■■□□□ 1.63
NPAS3-201ENST00000346562 KIF9Q9HAQ2 790 aa25.22■■□□□ 1.63
NPAS3-201ENST00000346562 BLMP54132 1417 aaPredicted RBP25.22■■□□□ 1.63
NPAS3-201ENST00000346562 MGEA5O60502 916 aa25.22■■□□□ 1.63
NPAS3-201ENST00000346562 OAS2P29728 719 aaKnown RBP25.22■■□□□ 1.63
NPAS3-201ENST00000346562 CCND2P30279 289 aa25.22■■□□□ 1.63
NPAS3-201ENST00000346562 GPATCH4Q5T3I0 446 aaKnown RBP25.22■■□□□ 1.63
NPAS3-201ENST00000346562 FAM170AA1A519 330 aa25.22■■□□□ 1.63
NPAS3-201ENST00000346562 NT5C1BQ96P26 610 aa25.22■■□□□ 1.63
NPAS3-201ENST00000346562 RABEP2Q9H5N1 569 aa25.22■■□□□ 1.63
NPAS3-201ENST00000346562 ADCY9O60503 1353 aa25.21■■□□□ 1.63
NPAS3-201ENST00000346562 HSPD1P10809 573 aaKnown RBP25.21■■□□□ 1.63
NPAS3-201ENST00000346562 PPP1R2P3Q6NXS1 205 aa25.21■■□□□ 1.63
NPAS3-201ENST00000346562 SLC39A2Q9NP94 309 aa25.21■■□□□ 1.63
NPAS3-201ENST00000346562 CPSF2Q9P2I0 782 aaKnown RBP25.21■■□□□ 1.63
NPAS3-201ENST00000346562 SLC12A6Q9UHW9 1150 aa25.21■■□□□ 1.63
NPAS3-201ENST00000346562 CMA1P23946 247 aa25.21■■□□□ 1.63
NPAS3-201ENST00000346562 TSTA3Q13630 321 aaPredicted RBP25.21■■□□□ 1.63
NPAS3-201ENST00000346562 USPL1Q5W0Q7 1092 aa25.21■■□□□ 1.63
NPAS3-201ENST00000346562 FAM81BQ96LP2 452 aa25.21■■□□□ 1.63
NPAS3-201ENST00000346562 ZNF577Q9BSK1 485 aa25.21■■□□□ 1.63
NPAS3-201ENST00000346562 CUEDC2Q9H467 287 aa25.21■■□□□ 1.63
NPAS3-201ENST00000346562 ANGPTL3Q9Y5C1 460 aa25.21■■□□□ 1.63
NPAS3-201ENST00000346562 ZNF233A6NK53 670 aa25.21■■□□□ 1.63
NPAS3-201ENST00000346562 ARHGEF37A1IGU5 675 aa25.21■■□□□ 1.63
NPAS3-201ENST00000346562 H2AFZP0C0S5 128 aa25.21■■□□□ 1.63
NPAS3-201ENST00000346562 SAT1P21673 171 aa25.21■■□□□ 1.63
NPAS3-201ENST00000346562 H2AFVQ71UI9 128 aa25.21■■□□□ 1.63
NPAS3-201ENST00000346562 BZW2Q9Y6E2 419 aaKnown RBP25.21■■□□□ 1.63
NPAS3-201ENST00000346562 MLH3Q9UHC1 1453 aa25.21■■□□□ 1.63
NPAS3-201ENST00000346562 SUPT20HL1Q3ZLR7 823 aa25.2■■□□□ 1.63
NPAS3-201ENST00000346562 ODR4Q5SWX8 454 aa25.2■■□□□ 1.63
NPAS3-201ENST00000346562 KAZNQ674X7 775 aa25.2■■□□□ 1.63
NPAS3-201ENST00000346562 CACTINQ8WUQ7 758 aaKnown RBP25.2■■□□□ 1.63
NPAS3-201ENST00000346562 NACC1Q96RE7 527 aa25.2■■□□□ 1.63
NPAS3-201ENST00000346562 HNRNPDLO14979 420 aaKnown RBP25.2■■□□□ 1.63
NPAS3-201ENST00000346562 HEXIM1O94992 359 aaKnown RBP25.2■■□□□ 1.63
NPAS3-201ENST00000346562 STMN1P16949 149 aa25.2■■□□□ 1.63
NPAS3-201ENST00000346562 ARMC9Q7Z3E5 817 aa25.2■■□□□ 1.63
NPAS3-201ENST00000346562 PLEKHA4Q9H4M7 779 aa25.2■■□□□ 1.63
NPAS3-201ENST00000346562 MAD1L1Q9Y6D9 718 aa25.2■■□□□ 1.63
NPAS3-201ENST00000346562 ZNF148Q9UQR1 794 aa25.2■■□□□ 1.62
NPAS3-201ENST00000346562 TCP1P17987 556 aaKnown RBP25.2■■□□□ 1.62
NPAS3-201ENST00000346562 Q9H521 79 aa25.2■■□□□ 1.62
NPAS3-201ENST00000346562 ATP7AQ04656 1500 aa25.2■■□□□ 1.62
NPAS3-201ENST00000346562 UBE3CQ15386 1083 aa25.19■■□□□ 1.62
NPAS3-201ENST00000346562 EXOC3L4Q17RC7 722 aa25.19■■□□□ 1.62
NPAS3-201ENST00000346562 SLC7A3Q8WY07 619 aa25.19■■□□□ 1.62
NPAS3-201ENST00000346562 ZSCAN20P17040 1043 aaPredicted RBP25.19■■□□□ 1.62
NPAS3-201ENST00000346562 A0A0D9SFI3 127 aa25.19■■□□□ 1.62
NPAS3-201ENST00000346562 RSRC2Q7L4I2 434 aaKnown RBP25.19■■□□□ 1.62
NPAS3-201ENST00000346562 SYMPKQ92797 1274 aaKnown RBP25.19■■□□□ 1.62
NPAS3-201ENST00000346562 DDX27Q96GQ7 796 aaKnown RBP25.19■■□□□ 1.62
NPAS3-201ENST00000346562 ACCSQ96QU6 501 aa25.19■■□□□ 1.62
NPAS3-201ENST00000346562 FAN1Q9Y2M0 1017 aa25.19■■□□□ 1.62
NPAS3-201ENST00000346562 hCG_1984214I3L0E3 225 aa25.18■■□□□ 1.62
NPAS3-201ENST00000346562 NOP9Q86U38 636 aaKnown RBP25.18■■□□□ 1.62
NPAS3-201ENST00000346562 RYBPQ8N488 228 aaPredicted RBP25.18■■□□□ 1.62
NPAS3-201ENST00000346562 ZNF713Q8N859 430 aaPredicted RBP25.18■■□□□ 1.62
NPAS3-201ENST00000346562 ABCC2Q92887 1545 aa25.18■■□□□ 1.62
NPAS3-201ENST00000346562 TTLL1O95922 423 aa25.18■■□□□ 1.62
NPAS3-201ENST00000346562 STK17AQ9UEE5 414 aa25.18■■□□□ 1.62
NPAS3-201ENST00000346562 VPS41P49754 854 aa25.18■■□□□ 1.62
NPAS3-201ENST00000346562 DPH5Q9H2P9 285 aa25.18■■□□□ 1.62
NPAS3-201ENST00000346562 PPARDQ03181 441 aa25.18■■□□□ 1.62
NPAS3-201ENST00000346562 MMEL1Q495T6 779 aa25.18■■□□□ 1.62
NPAS3-201ENST00000346562 TTBK2Q6IQ55 1244 aa25.18■■□□□ 1.62
NPAS3-201ENST00000346562 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.18■■□□□ 1.62
NPAS3-201ENST00000346562 KIAA1024Q9UPX6 916 aa25.18■■□□□ 1.62
NPAS3-201ENST00000346562 STK38LQ9Y2H1 464 aa25.18■■□□□ 1.62
NPAS3-201ENST00000346562 YWHAGP61981 247 aaKnown RBP eCLIP25.17■■□□□ 1.62
NPAS3-201ENST00000346562 SPATA1Q5VX52 437 aa25.17■■□□□ 1.62
NPAS3-201ENST00000346562 CAPN12Q6ZSI9 719 aa25.17■■□□□ 1.62
NPAS3-201ENST00000346562 SSH3Q8TE77 659 aa25.17■■□□□ 1.62
NPAS3-201ENST00000346562 LRGUKQ96M69 825 aa25.17■■□□□ 1.62
NPAS3-201ENST00000346562 TTC1Q99614 292 aa25.17■■□□□ 1.62
NPAS3-201ENST00000346562 PCDHA4Q9UN74 947 aa25.17■■□□□ 1.62
NPAS3-201ENST00000346562 WDR62O43379 1518 aa25.17■■□□□ 1.62
NPAS3-201ENST00000346562 CLGNO14967 610 aa25.17■■□□□ 1.62
NPAS3-201ENST00000346562 RNASELQ05823 741 aaKnown RBP25.17■■□□□ 1.62
NPAS3-201ENST00000346562 MUM1Q2TAK8 710 aa25.17■■□□□ 1.62
NPAS3-201ENST00000346562 PARD3BQ8TEW8 1205 aa25.17■■□□□ 1.62
NPAS3-201ENST00000346562 CHMP6Q96FZ7 201 aa25.17■■□□□ 1.62
NPAS3-201ENST00000346562 HAUS4Q9H6D7 363 aa25.17■■□□□ 1.62
NPAS3-201ENST00000346562 TRPC5Q9UL62 973 aaPredicted RBP25.17■■□□□ 1.62
NPAS3-201ENST00000346562 CIAO1O76071 339 aa25.17■■□□□ 1.62
NPAS3-201ENST00000346562 PSMC2P35998 433 aaKnown RBP25.17■■□□□ 1.62
NPAS3-201ENST00000346562 EDC3Q96F86 508 aaKnown RBP25.17■■□□□ 1.62
NPAS3-201ENST00000346562 COG7P83436 770 aa25.16■■□□□ 1.62
NPAS3-201ENST00000346562 PLEKHG3A1L390 1219 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms