RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 ZIC5Q96T25 663 aa19.72■□□□□ 0.75
CLDN4-201ENST00000340958 CFBP00751 764 aa19.71■□□□□ 0.75
CLDN4-201ENST00000340958 ICAM1P05362 532 aa19.71■□□□□ 0.75
CLDN4-201ENST00000340958 SLC10A3P09131 477 aa19.71■□□□□ 0.75
CLDN4-201ENST00000340958 PFKFB1P16118 471 aa19.71■□□□□ 0.75
CLDN4-201ENST00000340958 CLK2P49760 499 aaKnown RBP19.71■□□□□ 0.75
CLDN4-201ENST00000340958 AP3B2Q13367 1082 aa19.71■□□□□ 0.75
CLDN4-201ENST00000340958 SPECC1Q5M775 1068 aa19.71■□□□□ 0.75
CLDN4-201ENST00000340958 CCDC102AQ96A19 550 aa19.71■□□□□ 0.75
CLDN4-201ENST00000340958 VWA3AA6NCI4 1184 aa19.7■□□□□ 0.74
CLDN4-201ENST00000340958 COG2Q14746 738 aa19.7■□□□□ 0.74
CLDN4-201ENST00000340958 SHC4Q6S5L8 630 aa19.7■□□□□ 0.74
CLDN4-201ENST00000340958 GADL1Q6ZQY3 521 aa19.7■□□□□ 0.74
CLDN4-201ENST00000340958 AGBL1Q96MI9 1066 aa19.7■□□□□ 0.74
CLDN4-201ENST00000340958 CSRNP2Q9H175 543 aa19.7■□□□□ 0.74
CLDN4-201ENST00000340958 RAVER2Q9HCJ3 691 aaKnown RBP19.7■□□□□ 0.74
CLDN4-201ENST00000340958 PNMA2Q9UL42 364 aa19.7■□□□□ 0.74
CLDN4-201ENST00000340958 GOLGA6L3A6NEY3 463 aa19.69■□□□□ 0.74
CLDN4-201ENST00000340958 GCOM1H8Y6P7 765 aaPredicted RBP19.69■□□□□ 0.74
CLDN4-201ENST00000340958 NEMFO60524 1076 aa19.69■□□□□ 0.74
CLDN4-201ENST00000340958 POLR2MP0CAP2 368 aa19.69■□□□□ 0.74
CLDN4-201ENST00000340958 FDX1P10109 184 aa19.69■□□□□ 0.74
CLDN4-201ENST00000340958 HOXA13P31271 388 aaPredicted RBP19.69■□□□□ 0.74
CLDN4-201ENST00000340958 SYKP43405 635 aa19.69■□□□□ 0.74
CLDN4-201ENST00000340958 ZNF445P59923 1031 aa19.69■□□□□ 0.74
CLDN4-201ENST00000340958 NOGQ13253 232 aa19.69■□□□□ 0.74
CLDN4-201ENST00000340958 RESP18Q5W5W9 173 aa19.69■□□□□ 0.74
CLDN4-201ENST00000340958 ZNF579Q8NAF0 562 aaKnown RBP19.69■□□□□ 0.74
CLDN4-201ENST00000340958 CLSTN2Q9H4D0 955 aa19.69■□□□□ 0.74
CLDN4-201ENST00000340958 SLC38A10Q9HBR0 1119 aa19.69■□□□□ 0.74
CLDN4-201ENST00000340958 MEIS2O14770 477 aa19.69■□□□□ 0.74
CLDN4-201ENST00000340958 FOSP01100 380 aaPredicted RBP19.69■□□□□ 0.74
CLDN4-201ENST00000340958 ALAS1P13196 640 aa19.69■□□□□ 0.74
CLDN4-201ENST00000340958 SH3D19Q5HYK7 790 aa19.69■□□□□ 0.74
CLDN4-201ENST00000340958 DTHD1Q6ZMT9 781 aa19.69■□□□□ 0.74
CLDN4-201ENST00000340958 FCHSD1Q86WN1 690 aa19.69■□□□□ 0.74
CLDN4-201ENST00000340958 ATG4CQ96DT6 458 aa19.69■□□□□ 0.74
CLDN4-201ENST00000340958 NAP1L4Q99733 375 aaKnown RBP19.69■□□□□ 0.74
CLDN4-201ENST00000340958 SDF4Q9BRK5 362 aa19.69■□□□□ 0.74
CLDN4-201ENST00000340958 ANO3Q9BYT9 981 aa19.69■□□□□ 0.74
CLDN4-201ENST00000340958 MORC2Q9Y6X9 1032 aaPredicted RBP19.69■□□□□ 0.74
CLDN4-201ENST00000340958 SPDYE5A6NIY4 337 aa19.68■□□□□ 0.74
CLDN4-201ENST00000340958 LAD1O00515 517 aa19.68■□□□□ 0.74
CLDN4-201ENST00000340958 VWA5AO00534 786 aa19.68■□□□□ 0.74
CLDN4-201ENST00000340958 IRF6O14896 467 aa19.68■□□□□ 0.74
CLDN4-201ENST00000340958 MARCH6O60337 910 aa19.68■□□□□ 0.74
CLDN4-201ENST00000340958 MAP2K2P36507 400 aa19.68■□□□□ 0.74
CLDN4-201ENST00000340958 GRIN1Q05586 938 aa19.68■□□□□ 0.74
CLDN4-201ENST00000340958 SNW1Q13573 536 aaKnown RBP19.68■□□□□ 0.74
CLDN4-201ENST00000340958 ARL6IP4Q66PJ3 421 aaKnown RBP19.68■□□□□ 0.74
CLDN4-201ENST00000340958 CATSPERGQ6ZRH7 1159 aa19.68■□□□□ 0.74
CLDN4-201ENST00000340958 FMR1NBQ8N0W7 255 aaPredicted RBP19.68■□□□□ 0.74
CLDN4-201ENST00000340958 OPTNQ96CV9 577 aa19.68■□□□□ 0.74
CLDN4-201ENST00000340958 SLC10A4Q96EP9 437 aa19.68■□□□□ 0.74
CLDN4-201ENST00000340958 HOMER2Q9NSB8 354 aa19.68■□□□□ 0.74
CLDN4-201ENST00000340958 HOXC10Q9NYD6 342 aa19.68■□□□□ 0.74
CLDN4-201ENST00000340958 CXCL11O14625 94 aa19.67■□□□□ 0.74
CLDN4-201ENST00000340958 ZNF202O95125 648 aa19.67■□□□□ 0.74
CLDN4-201ENST00000340958 ORC2Q13416 577 aaPredicted RBP19.67■□□□□ 0.74
CLDN4-201ENST00000340958 ENGASEQ8NFI3 743 aa19.67■□□□□ 0.74
CLDN4-201ENST00000340958 KCNH3Q9ULD8 1083 aa19.67■□□□□ 0.74
CLDN4-201ENST00000340958 CTAGE5O15320 804 aa19.67■□□□□ 0.74
CLDN4-201ENST00000340958 DSG3P32926 999 aa19.67■□□□□ 0.74
CLDN4-201ENST00000340958 MKRN3Q13064 507 aaKnown RBP19.67■□□□□ 0.74
CLDN4-201ENST00000340958 PPIL2Q13356 520 aa19.67■□□□□ 0.74
CLDN4-201ENST00000340958 LRSAM1Q6UWE0 723 aa19.67■□□□□ 0.74
CLDN4-201ENST00000340958 MCF2L2Q86YR7 1114 aa19.67■□□□□ 0.74
CLDN4-201ENST00000340958 EHMT1Q9H9B1 1298 aa19.67■□□□□ 0.74
CLDN4-201ENST00000340958 UNCXA6NJT0 531 aa19.66■□□□□ 0.74
CLDN4-201ENST00000340958 PIK3CDO00329 1044 aa19.66■□□□□ 0.74
CLDN4-201ENST00000340958 OR52Z1P0C646 297 aa19.66■□□□□ 0.74
CLDN4-201ENST00000340958 CALCRLQ16602 461 aa19.66■□□□□ 0.74
CLDN4-201ENST00000340958 TEX2Q8IWB9 1127 aa19.66■□□□□ 0.74
CLDN4-201ENST00000340958 CKAP2LQ8IYA6 745 aa19.66■□□□□ 0.74
CLDN4-201ENST00000340958 DDX25Q9UHL0 483 aaKnown RBP19.66■□□□□ 0.74
CLDN4-201ENST00000340958 ZNF536O15090 1300 aa19.66■□□□□ 0.74
CLDN4-201ENST00000340958 PHIPQ8WWQ0 1821 aa19.66■□□□□ 0.74
CLDN4-201ENST00000340958 OPLAHO14841 1288 aa19.65■□□□□ 0.74
CLDN4-201ENST00000340958 TDP2O95551 362 aa19.65■□□□□ 0.74
CLDN4-201ENST00000340958 HSPA1AP0DMV8 641 aaKnown RBP19.65■□□□□ 0.74
CLDN4-201ENST00000340958 HSPA1BP0DMV9 641 aaKnown RBP19.65■□□□□ 0.74
CLDN4-201ENST00000340958 TXLNAP40222 546 aa19.65■□□□□ 0.74
CLDN4-201ENST00000340958 PLS1Q14651 629 aa19.65■□□□□ 0.74
CLDN4-201ENST00000340958 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.65■□□□□ 0.74
CLDN4-201ENST00000340958 A0A0G2JLL6 359 aaPredicted RBP19.65■□□□□ 0.74
CLDN4-201ENST00000340958 GCFC2P16383 781 aaKnown RBP19.65■□□□□ 0.74
CLDN4-201ENST00000340958 ZNF76P36508 570 aa19.65■□□□□ 0.74
CLDN4-201ENST00000340958 LONP1P36776 959 aaKnown RBP19.65■□□□□ 0.74
CLDN4-201ENST00000340958 USP11P51784 963 aa19.65■□□□□ 0.74
CLDN4-201ENST00000340958 TREML2Q5T2D2 321 aa19.65■□□□□ 0.74
CLDN4-201ENST00000340958 PPP4R3AQ6IN85 833 aa19.65■□□□□ 0.74
CLDN4-201ENST00000340958 PRRT2Q7Z6L0 340 aaPredicted RBP19.65■□□□□ 0.74
CLDN4-201ENST00000340958 C4orf32Q8N8J7 132 aa19.65■□□□□ 0.74
CLDN4-201ENST00000340958 PROCA1Q8NCQ7 364 aaPredicted RBP19.65■□□□□ 0.74
CLDN4-201ENST00000340958 RASSF8Q8NHQ8 419 aa19.65■□□□□ 0.74
CLDN4-201ENST00000340958 SYMPKQ92797 1274 aaKnown RBP19.65■□□□□ 0.74
CLDN4-201ENST00000340958 PANK2Q9BZ23 570 aa19.65■□□□□ 0.74
CLDN4-201ENST00000340958 TMEM60Q9H2L4 133 aa19.65■□□□□ 0.74
CLDN4-201ENST00000340958 TSPY26PQ9H489 355 aa19.65■□□□□ 0.74
CLDN4-201ENST00000340958 WBP1LQ9NX94 342 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms