RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 GPATCH4Q5T3I0 446 aaKnown RBP22.78■■□□□ 1.24
ITGA4-202ENST00000339307 DGKHQ86XP1 1220 aa22.78■■□□□ 1.24
ITGA4-202ENST00000339307 PNMA1Q8ND90 353 aa22.78■■□□□ 1.24
ITGA4-202ENST00000339307 CDX2Q99626 313 aaPredicted RBP22.78■■□□□ 1.24
ITGA4-202ENST00000339307 WDR11Q9BZH6 1224 aa22.78■■□□□ 1.24
ITGA4-202ENST00000339307 SUPT16HQ9Y5B9 1047 aaKnown RBP22.78■■□□□ 1.24
ITGA4-202ENST00000339307 COL6A3P12111 3177 aa22.78■■□□□ 1.24
ITGA4-202ENST00000339307 CSF2RAP15509 400 aa22.77■■□□□ 1.24
ITGA4-202ENST00000339307 PSMC6P62333 389 aa22.77■■□□□ 1.24
ITGA4-202ENST00000339307 CLEC4DQ8WXI8 215 aa22.77■■□□□ 1.24
ITGA4-202ENST00000339307 CTNNA3Q9UI47 895 aa22.77■■□□□ 1.24
ITGA4-202ENST00000339307 SNHG28P0DPA3 235 aa22.76■■□□□ 1.23
ITGA4-202ENST00000339307 ACRP10323 421 aa22.76■■□□□ 1.23
ITGA4-202ENST00000339307 CYP2C18P33260 490 aa22.76■■□□□ 1.23
ITGA4-202ENST00000339307 RPS6P62753 249 aaKnown RBP22.76■■□□□ 1.23
ITGA4-202ENST00000339307 NKX3-2P78367 333 aa22.76■■□□□ 1.23
ITGA4-202ENST00000339307 ZSCAN10Q96SZ4 725 aaPredicted RBP22.76■■□□□ 1.23
ITGA4-202ENST00000339307 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.76■■□□□ 1.23
ITGA4-202ENST00000339307 Q9Y3F1 56 aa22.76■■□□□ 1.23
ITGA4-202ENST00000339307 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.75■■□□□ 1.23
ITGA4-202ENST00000339307 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.75■■□□□ 1.23
ITGA4-202ENST00000339307 DUSP28Q4G0W2 176 aa22.75■■□□□ 1.23
ITGA4-202ENST00000339307 MORC4Q8TE76 937 aa22.75■■□□□ 1.23
ITGA4-202ENST00000339307 DSCC1Q9BVC3 393 aa22.75■■□□□ 1.23
ITGA4-202ENST00000339307 VAT1LQ9HCJ6 419 aa22.75■■□□□ 1.23
ITGA4-202ENST00000339307 GPHNQ9NQX3 736 aaPredicted RBP22.75■■□□□ 1.23
ITGA4-202ENST00000339307 MYL3P08590 195 aa22.74■■□□□ 1.23
ITGA4-202ENST00000339307 CDC37Q16543 378 aaPredicted RBP22.74■■□□□ 1.23
ITGA4-202ENST00000339307 OR6J1Q8NGC5 347 aa22.74■■□□□ 1.23
ITGA4-202ENST00000339307 MYLIPQ8WY64 445 aa22.74■■□□□ 1.23
ITGA4-202ENST00000339307 UBAC1Q9BSL1 405 aa22.74■■□□□ 1.23
ITGA4-202ENST00000339307 KRT23Q9C075 422 aa22.74■■□□□ 1.23
ITGA4-202ENST00000339307 TTYH1Q9H313 450 aaPredicted RBP22.74■■□□□ 1.23
ITGA4-202ENST00000339307 ZSWIM5Q9P217 1185 aa22.74■■□□□ 1.23
ITGA4-202ENST00000339307 LRRC37A2A6NM11 1700 aa22.74■■□□□ 1.23
ITGA4-202ENST00000339307 LCTP09848 1927 aa22.74■■□□□ 1.23
ITGA4-202ENST00000339307 WDR19Q8NEZ3 1342 aa22.74■■□□□ 1.23
ITGA4-202ENST00000339307 B4DLN1 442 aa22.74■■□□□ 1.23
ITGA4-202ENST00000339307 MRPL12P52815 198 aaKnown RBP22.74■■□□□ 1.23
ITGA4-202ENST00000339307 TRPV6Q9H1D0 765 aa22.74■■□□□ 1.23
ITGA4-202ENST00000339307 HIPK3Q9H422 1215 aa22.74■■□□□ 1.23
ITGA4-202ENST00000339307 TNKSO95271 1327 aa22.73■■□□□ 1.23
ITGA4-202ENST00000339307 CD4P01730 458 aa22.73■■□□□ 1.23
ITGA4-202ENST00000339307 ZNF365Q70YC5 407 aa22.73■■□□□ 1.23
ITGA4-202ENST00000339307 ADGRF4Q8IZF3 695 aa22.73■■□□□ 1.23
ITGA4-202ENST00000339307 ENAHQ8N8S7 591 aaPredicted RBP22.73■■□□□ 1.23
ITGA4-202ENST00000339307 LOC102724159A0A0B4J2E5 919 aa22.72■■□□□ 1.23
ITGA4-202ENST00000339307 PARP1P09874 1014 aaKnown RBP22.72■■□□□ 1.23
ITGA4-202ENST00000339307 NT5C2P49902 561 aa22.72■■□□□ 1.23
ITGA4-202ENST00000339307 CPT1AP50416 773 aa22.72■■□□□ 1.23
ITGA4-202ENST00000339307 CCL23P55773 120 aa22.72■■□□□ 1.23
ITGA4-202ENST00000339307 IRX6P78412 446 aaPredicted RBP22.72■■□□□ 1.23
ITGA4-202ENST00000339307 PPP2R5BQ15173 497 aa22.72■■□□□ 1.23
ITGA4-202ENST00000339307 PWP2Q15269 919 aaKnown RBP22.72■■□□□ 1.23
ITGA4-202ENST00000339307 BRDTQ58F21 947 aaPredicted RBP22.72■■□□□ 1.23
ITGA4-202ENST00000339307 TMEM240Q5SV17 173 aa22.72■■□□□ 1.23
ITGA4-202ENST00000339307 C16orf59Q7L2K0 433 aa22.72■■□□□ 1.23
ITGA4-202ENST00000339307 SLC43A3Q8NBI5 491 aa22.72■■□□□ 1.23
ITGA4-202ENST00000339307 DNERQ8NFT8 737 aa22.72■■□□□ 1.23
ITGA4-202ENST00000339307 CNNM2Q9H8M5 875 aa22.72■■□□□ 1.23
ITGA4-202ENST00000339307 POLR3EQ9NVU0 708 aa22.72■■□□□ 1.23
ITGA4-202ENST00000339307 LAMA2P24043 3122 aaKnown RBP22.71■■□□□ 1.23
ITGA4-202ENST00000339307 GRIN2DO15399 1336 aa22.71■■□□□ 1.23
ITGA4-202ENST00000339307 B4GALT4O60513 344 aa22.71■■□□□ 1.23
ITGA4-202ENST00000339307 FOSL2P15408 326 aa22.71■■□□□ 1.23
ITGA4-202ENST00000339307 DNAJB2P25686 324 aa22.71■■□□□ 1.23
ITGA4-202ENST00000339307 CHMP4BP1P59074 171 aa22.71■■□□□ 1.23
ITGA4-202ENST00000339307 ASPRV1Q53RT3 343 aa22.71■■□□□ 1.23
ITGA4-202ENST00000339307 FAM47CQ5HY64 1035 aa22.71■■□□□ 1.23
ITGA4-202ENST00000339307 IFIT1BQ5T764 474 aaKnown RBP22.71■■□□□ 1.23
ITGA4-202ENST00000339307 PSRC1Q6PGN9 363 aaPredicted RBP22.71■■□□□ 1.23
ITGA4-202ENST00000339307 RAD50Q92878 1312 aa22.7■■□□□ 1.23
ITGA4-202ENST00000339307 LAMA4Q16363 1823 aa22.7■■□□□ 1.22
ITGA4-202ENST00000339307 TXNP10599 105 aaKnown RBP22.7■■□□□ 1.22
ITGA4-202ENST00000339307 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.7■■□□□ 1.22
ITGA4-202ENST00000339307 MAFAQ8NHW3 353 aaPredicted RBP22.7■■□□□ 1.22
ITGA4-202ENST00000339307 SCFD2Q8WU76 684 aa22.7■■□□□ 1.22
ITGA4-202ENST00000339307 ANKS1AQ92625 1134 aa22.7■■□□□ 1.22
ITGA4-202ENST00000339307 SEZ6LQ9BYH1 1024 aa22.7■■□□□ 1.22
ITGA4-202ENST00000339307 ABCB11O95342 1321 aa22.7■■□□□ 1.22
ITGA4-202ENST00000339307 UMODL1Q5DID0 1318 aa22.7■■□□□ 1.22
ITGA4-202ENST00000339307 RBM47A0AV96 593 aaKnown RBP22.69■■□□□ 1.22
ITGA4-202ENST00000339307 GRXCR1A8MXD5 290 aa22.69■■□□□ 1.22
ITGA4-202ENST00000339307 PDE4AP27815 886 aa22.69■■□□□ 1.22
ITGA4-202ENST00000339307 TTC22Q5TAA0 569 aa22.69■■□□□ 1.22
ITGA4-202ENST00000339307 TBC1D5Q92609 795 aa22.69■■□□□ 1.22
ITGA4-202ENST00000339307 COPS5Q92905 334 aa22.69■■□□□ 1.22
ITGA4-202ENST00000339307 TIFAQ96CG3 184 aa22.69■■□□□ 1.22
ITGA4-202ENST00000339307 IL23AQ9NPF7 189 aa22.69■■□□□ 1.22
ITGA4-202ENST00000339307 FGBP02675 491 aa22.68■■□□□ 1.22
ITGA4-202ENST00000339307 PURAQ00577 322 aaKnown RBP22.68■■□□□ 1.22
ITGA4-202ENST00000339307 TRDNQ13061 729 aa22.68■■□□□ 1.22
ITGA4-202ENST00000339307 TTLL4Q14679 1199 aa22.68■■□□□ 1.22
ITGA4-202ENST00000339307 QRICH1Q2TAL8 776 aa22.68■■□□□ 1.22
ITGA4-202ENST00000339307 FBXO11Q86XK2 927 aa22.68■■□□□ 1.22
ITGA4-202ENST00000339307 MCF2L2Q86YR7 1114 aa22.68■■□□□ 1.22
ITGA4-202ENST00000339307 MTG1Q9BT17 334 aaPredicted RBP22.68■■□□□ 1.22
ITGA4-202ENST00000339307 IL25Q9H293 177 aa22.68■■□□□ 1.22
ITGA4-202ENST00000339307 ALDH8A1Q9H2A2 487 aaPredicted RBP22.68■■□□□ 1.22
ITGA4-202ENST00000339307 MTIF3Q9H2K0 278 aaKnown RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms