RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 RSRC1Q96IZ7 334 aaKnown RBP17.28■□□□□ 0.36
HDAC5-202ENST00000336057 CCDC17Q96LX7 622 aa17.28■□□□□ 0.36
HDAC5-202ENST00000336057 GCFC2P16383 781 aaKnown RBP17.28■□□□□ 0.36
HDAC5-202ENST00000336057 PLCG1P19174 1290 aa17.28■□□□□ 0.36
HDAC5-202ENST00000336057 LRRC41Q15345 812 aa17.28■□□□□ 0.36
HDAC5-202ENST00000336057 KMT5BQ4FZB7 885 aa17.28■□□□□ 0.36
HDAC5-202ENST00000336057 DHX40Q8IX18 779 aaKnown RBP17.28■□□□□ 0.36
HDAC5-202ENST00000336057 GJA10Q969M2 543 aa17.28■□□□□ 0.36
HDAC5-202ENST00000336057 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.28■□□□□ 0.361e-6■■■■□ 22.1
HDAC5-202ENST00000336057 USP21Q9UK80 565 aa17.28■□□□□ 0.36
HDAC5-202ENST00000336057 FAM184BQ9ULE4 1060 aa17.28■□□□□ 0.36
HDAC5-202ENST00000336057 CDHR2Q9BYE9 1310 aa17.28■□□□□ 0.36
HDAC5-202ENST00000336057 POLR2MP0CAP2 368 aa17.28■□□□□ 0.36
HDAC5-202ENST00000336057 NR2F2P24468 414 aa17.28■□□□□ 0.36
HDAC5-202ENST00000336057 EXOSC10Q01780 885 aaKnown RBP17.28■□□□□ 0.36
HDAC5-202ENST00000336057 KIAA0825Q8IV33 1275 aa17.28■□□□□ 0.36
HDAC5-202ENST00000336057 MRRFQ96E11 262 aaKnown RBP17.28■□□□□ 0.36
HDAC5-202ENST00000336057 DISC1Q9NRI5 854 aa17.28■□□□□ 0.36
HDAC5-202ENST00000336057 BSDC1Q9NW68 430 aaPredicted RBP17.28■□□□□ 0.36
HDAC5-202ENST00000336057 LARSQ9P2J5 1176 aaKnown RBP17.28■□□□□ 0.36
HDAC5-202ENST00000336057 PXDNLA1KZ92 1463 aa17.28■□□□□ 0.36
HDAC5-202ENST00000336057 NEXMIFQ5QGS0 1516 aa17.28■□□□□ 0.36
HDAC5-202ENST00000336057 FAM170AA1A519 330 aa17.28■□□□□ 0.36
HDAC5-202ENST00000336057 CDC27P30260 824 aa17.28■□□□□ 0.36
HDAC5-202ENST00000336057 DGKHQ86XP1 1220 aa17.28■□□□□ 0.36
HDAC5-202ENST00000336057 DYNLL2Q96FJ2 89 aa17.28■□□□□ 0.36
HDAC5-202ENST00000336057 MTA3Q9BTC8 594 aa17.28■□□□□ 0.36
HDAC5-202ENST00000336057 AMNQ9BXJ7 453 aa17.28■□□□□ 0.36
HDAC5-202ENST00000336057 SPATA31A3Q5VYP0 1347 aa17.28■□□□□ 0.36
HDAC5-202ENST00000336057 N4BP1O75113 896 aaKnown RBP17.27■□□□□ 0.36
HDAC5-202ENST00000336057 TTLL1O95922 423 aa17.27■□□□□ 0.36
HDAC5-202ENST00000336057 ALX1Q15699 326 aa17.27■□□□□ 0.36
HDAC5-202ENST00000336057 CEP63Q96MT8 703 aa17.27■□□□□ 0.36
HDAC5-202ENST00000336057 ISCA1Q9BUE6 129 aa17.27■□□□□ 0.36
HDAC5-202ENST00000336057 NHEJ1Q9H9Q4 299 aaPredicted RBP17.27■□□□□ 0.36
HDAC5-202ENST00000336057 STIM2Q9P246 746 aa17.27■□□□□ 0.36
HDAC5-202ENST00000336057 TMEM232C9JQI7 657 aa17.27■□□□□ 0.36
HDAC5-202ENST00000336057 RCAN1P53805 252 aa17.27■□□□□ 0.36
HDAC5-202ENST00000336057 SYNE4Q8N205 404 aa17.27■□□□□ 0.36
HDAC5-202ENST00000336057 DPH5Q9H2P9 285 aa17.27■□□□□ 0.36
HDAC5-202ENST00000336057 MRPL11Q9Y3B7 192 aaKnown RBP17.27■□□□□ 0.36
HDAC5-202ENST00000336057 RABGAP1Q9Y3P9 1069 aa17.27■□□□□ 0.36
HDAC5-202ENST00000336057 PALLDQ8WX93 1383 aa17.27■□□□□ 0.36
HDAC5-202ENST00000336057 PNMA6AP0CW24 399 aaPredicted RBP17.27■□□□□ 0.36
HDAC5-202ENST00000336057 DDIT3P35638 169 aa17.27■□□□□ 0.36
HDAC5-202ENST00000336057 DOK7Q18PE1 504 aa17.27■□□□□ 0.36
HDAC5-202ENST00000336057 FYB2Q5VWT5 728 aa17.27■□□□□ 0.36
HDAC5-202ENST00000336057 ZMYND10O75800 440 aa17.27■□□□□ 0.35
HDAC5-202ENST00000336057 NT5C2P49902 561 aa17.27■□□□□ 0.35
HDAC5-202ENST00000336057 INO80Q9ULG1 1556 aaPredicted RBP17.26■□□□□ 0.35
HDAC5-202ENST00000336057 PDE6BP35913 854 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 PABPC4Q13310 644 aaKnown RBP eCLIP17.26■□□□□ 0.352e-7■■■■■ 38.7
HDAC5-202ENST00000336057 USP17L2Q6R6M4 530 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 KRT12Q99456 494 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 TMOD4Q9NZQ9 345 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 JRKLQ9Y4A0 524 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 COMMD10Q9Y6G5 202 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 OVOS2A0A0J9YW53 1432 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 OVOS2Q6IE36 1432 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 K7ENM7 598 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 FNBP4Q8N3X1 1017 aaPredicted RBP17.26■□□□□ 0.35
HDAC5-202ENST00000336057 KCNG1Q9UIX4 513 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 FAN1Q9Y2M0 1017 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 EPHB4P54760 987 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 TOGARAM2Q6ZUX3 1019 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 ATG9AQ7Z3C6 839 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 NLRX1Q86UT6 975 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 MB21D1Q8N884 522 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 UBN2Q6ZU65 1347 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 USP17L3A6NCW0 530 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 USP17L4A6NCW7 530 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 DCAF8L1A6NGE4 600 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 SNAP23O00161 211 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 TNNI1P19237 187 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 ATP11AP98196 1134 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 USP17L1Q7RTZ2 530 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.26■□□□□ 0.357e-7■■■■□ 22.9
HDAC5-202ENST00000336057 NCOA3Q9Y6Q9 1424 aa17.26■□□□□ 0.35
HDAC5-202ENST00000336057 USP27XA6NNY8 438 aa17.25■□□□□ 0.35
HDAC5-202ENST00000336057 PTPRUQ92729 1446 aa17.25■□□□□ 0.35
HDAC5-202ENST00000336057 SH3GLB2Q9NR46 395 aa17.25■□□□□ 0.35
HDAC5-202ENST00000336057 FAM169AQ9Y6X4 670 aa17.25■□□□□ 0.35
HDAC5-202ENST00000336057 OTUD6AQ7L8S5 288 aa17.25■□□□□ 0.35
HDAC5-202ENST00000336057 PNMA8AQ86V59 439 aaPredicted RBP17.25■□□□□ 0.35
HDAC5-202ENST00000336057 SPATS2Q86XZ4 545 aaKnown RBP17.25■□□□□ 0.35
HDAC5-202ENST00000336057 IL25Q9H293 177 aa17.25■□□□□ 0.35
HDAC5-202ENST00000336057 GDAQ9Y2T3 454 aa17.25■□□□□ 0.35
HDAC5-202ENST00000336057 RNF40O75150 1001 aa17.25■□□□□ 0.35
HDAC5-202ENST00000336057 EIF4A3P38919 411 aaKnown RBP17.25■□□□□ 0.35
HDAC5-202ENST00000336057 CYP27A1Q02318 531 aa17.25■□□□□ 0.35
HDAC5-202ENST00000336057 CUL4BQ13620 913 aa17.25■□□□□ 0.35
HDAC5-202ENST00000336057 DIXDC1Q155Q3 683 aa17.25■□□□□ 0.35
HDAC5-202ENST00000336057 VSIG1Q86XK7 387 aa17.25■□□□□ 0.35
HDAC5-202ENST00000336057 OXER1Q8TDS5 423 aa17.25■□□□□ 0.35
HDAC5-202ENST00000336057 COA7Q96BR5 231 aa17.25■□□□□ 0.35
HDAC5-202ENST00000336057 CPS1P31327 1500 aa17.25■□□□□ 0.35
HDAC5-202ENST00000336057 NBPF26B4DH59 902 aa17.25■□□□□ 0.35
HDAC5-202ENST00000336057 NBPF10Q6P3W6 841 aaKnown RBP17.25■□□□□ 0.35
HDAC5-202ENST00000336057 SGMS1Q86VZ5 419 aa17.25■□□□□ 0.35
HDAC5-202ENST00000336057 NBPF15Q8N660 670 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms