RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 CYP39A1Q9NYL5 469 aa21.45■■□□□ 1.02
TSSC4-201ENST00000333256 PCDHA4Q9UN74 947 aa21.45■■□□□ 1.02
TSSC4-201ENST00000333256 IVNS1ABPQ9Y6Y0 642 aa21.45■■□□□ 1.02
TSSC4-201ENST00000333256 BTBD18B2RXH4 712 aa21.44■■□□□ 1.02
TSSC4-201ENST00000333256 GCOM1H8Y6P7 765 aaPredicted RBP21.44■■□□□ 1.02
TSSC4-201ENST00000333256 POLR2MP0CAP2 368 aa21.44■■□□□ 1.02
TSSC4-201ENST00000333256 FCER1AP12319 257 aa21.44■■□□□ 1.02
TSSC4-201ENST00000333256 GNA11P29992 359 aa21.44■■□□□ 1.02
TSSC4-201ENST00000333256 MRPL12P52815 198 aaKnown RBP21.44■■□□□ 1.02
TSSC4-201ENST00000333256 NR5A1Q13285 461 aa21.44■■□□□ 1.02
TSSC4-201ENST00000333256 KCTD2Q14681 263 aa21.44■■□□□ 1.02
TSSC4-201ENST00000333256 JAKMIP3Q5VZ66 844 aa21.44■■□□□ 1.02
TSSC4-201ENST00000333256 PLEKHH3Q7Z736 793 aa21.44■■□□□ 1.02
TSSC4-201ENST00000333256 FCHSD1Q86WN1 690 aa21.44■■□□□ 1.02
TSSC4-201ENST00000333256 DIS3L2Q8IYB7 885 aaKnown RBP21.44■■□□□ 1.02
TSSC4-201ENST00000333256 BLIDQ8IZY5 108 aa21.44■■□□□ 1.02
TSSC4-201ENST00000333256 COL20A1Q9P218 1284 aa21.44■■□□□ 1.02
TSSC4-201ENST00000333256 TNPO2O14787 897 aaKnown RBP21.44■■□□□ 1.02
TSSC4-201ENST00000333256 STX6O43752 255 aa21.44■■□□□ 1.02
TSSC4-201ENST00000333256 PSMC4P43686 418 aa21.44■■□□□ 1.02
TSSC4-201ENST00000333256 HSD17B4P51659 736 aa21.44■■□□□ 1.02
TSSC4-201ENST00000333256 NOM1Q5C9Z4 860 aaKnown RBP21.44■■□□□ 1.02
TSSC4-201ENST00000333256 FOXD4L5Q5VV16 416 aaPredicted RBP21.44■■□□□ 1.02
TSSC4-201ENST00000333256 MCTP1Q6DN14 999 aa21.44■■□□□ 1.02
TSSC4-201ENST00000333256 JMYQ8N9B5 988 aa21.44■■□□□ 1.02
TSSC4-201ENST00000333256 ZNF296Q8WUU4 475 aaPredicted RBP21.44■■□□□ 1.02
TSSC4-201ENST00000333256 FOXD4L4Q8WXT5 416 aaPredicted RBP21.44■■□□□ 1.02
TSSC4-201ENST00000333256 TRIM47Q96LD4 638 aa21.44■■□□□ 1.02
TSSC4-201ENST00000333256 CNTN2Q02246 1040 aa21.43■■□□□ 1.02
TSSC4-201ENST00000333256 REXO1Q8N1G1 1221 aaKnown RBP21.43■■□□□ 1.02
TSSC4-201ENST00000333256 CD99L2Q8TCZ2 262 aa21.43■■□□□ 1.02
TSSC4-201ENST00000333256 SYTL5Q8TDW5 730 aaPredicted RBP21.43■■□□□ 1.02
TSSC4-201ENST00000333256 ZSWIM8A7E2V4 1837 aa21.42■■□□□ 1.02
TSSC4-201ENST00000333256 KIF28PB7ZC32 967 aa21.42■■□□□ 1.02
TSSC4-201ENST00000333256 PTPREP23469 700 aa21.42■■□□□ 1.02
TSSC4-201ENST00000333256 ADORA2AP29274 412 aa21.42■■□□□ 1.02
TSSC4-201ENST00000333256 KRT2P35908 639 aa21.42■■□□□ 1.02
TSSC4-201ENST00000333256 SAFBQ15424 915 aaKnown RBP eCLIP21.42■■□□□ 1.02
TSSC4-201ENST00000333256 FERMT3Q86UX7 667 aa21.42■■□□□ 1.02
TSSC4-201ENST00000333256 DAGLBQ8NCG7 672 aa21.42■■□□□ 1.02
TSSC4-201ENST00000333256 RGS22Q8NE09 1264 aa21.42■■□□□ 1.02
TSSC4-201ENST00000333256 PCDHA6Q9UN73 950 aa21.42■■□□□ 1.02
TSSC4-201ENST00000333256 MTMR6Q9Y217 621 aa21.42■■□□□ 1.02
TSSC4-201ENST00000333256 PCDHA8Q9Y5H6 950 aa21.42■■□□□ 1.02
TSSC4-201ENST00000333256 PIK3CDO00329 1044 aa21.41■■□□□ 1.02
TSSC4-201ENST00000333256 CLK2P49760 499 aaKnown RBP21.41■■□□□ 1.02
TSSC4-201ENST00000333256 FCGRTP55899 365 aa21.41■■□□□ 1.02
TSSC4-201ENST00000333256 GALNT17Q6IS24 598 aa21.41■■□□□ 1.02
TSSC4-201ENST00000333256 FAM177A1Q8N128 213 aaPredicted RBP21.41■■□□□ 1.02
TSSC4-201ENST00000333256 BICD2Q8TD16 824 aa21.41■■□□□ 1.02
TSSC4-201ENST00000333256 BRMS1Q9HCU9 246 aa21.41■■□□□ 1.02
TSSC4-201ENST00000333256 PFASO15067 1338 aa21.41■■□□□ 1.02
TSSC4-201ENST00000333256 FAM205CA6NFA0 338 aa21.4■■□□□ 1.02
TSSC4-201ENST00000333256 STRNO43815 780 aa21.4■■□□□ 1.02
TSSC4-201ENST00000333256 FKTNO75072 461 aa21.4■■□□□ 1.02
TSSC4-201ENST00000333256 DDIT3P35638 169 aa21.4■■□□□ 1.02
TSSC4-201ENST00000333256 GHRHRQ02643 423 aa21.4■■□□□ 1.02
TSSC4-201ENST00000333256 GNL2Q13823 731 aaKnown RBP21.4■■□□□ 1.02
TSSC4-201ENST00000333256 KIF22Q14807 665 aa21.4■■□□□ 1.02
TSSC4-201ENST00000333256 EARS2Q5JPH6 523 aaKnown RBP21.4■■□□□ 1.02
TSSC4-201ENST00000333256 TAAR1Q96RJ0 339 aa21.4■■□□□ 1.02
TSSC4-201ENST00000333256 GLT8D2Q9H1C3 349 aa21.4■■□□□ 1.02
TSSC4-201ENST00000333256 DDX49Q9Y6V7 483 aaKnown RBP21.4■■□□□ 1.02
TSSC4-201ENST00000333256 POTEB2H3BUK9 544 aa21.4■■□□□ 1.02
TSSC4-201ENST00000333256 M0R2N6 131 aa21.4■■□□□ 1.02
TSSC4-201ENST00000333256 COBLO75128 1261 aa21.4■■□□□ 1.02
TSSC4-201ENST00000333256 UBXN2AP68543 259 aa21.4■■□□□ 1.02
TSSC4-201ENST00000333256 GRB14Q14449 540 aa21.4■■□□□ 1.02
TSSC4-201ENST00000333256 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.4■■□□□ 1.02
TSSC4-201ENST00000333256 SPDYE3A6NKU9 549 aa21.39■■□□□ 1.01
TSSC4-201ENST00000333256 FOXN1O15353 648 aa21.39■■□□□ 1.01
TSSC4-201ENST00000333256 TNFRSF25Q93038 417 aa21.39■■□□□ 1.01
TSSC4-201ENST00000333256 DNAJC25-GNG10A0A024R161 153 aa21.38■■□□□ 1.01
TSSC4-201ENST00000333256 SLC15A5A6NIM6 579 aa21.38■■□□□ 1.01
TSSC4-201ENST00000333256 HSPA1AP0DMV8 641 aaKnown RBP21.38■■□□□ 1.01
TSSC4-201ENST00000333256 HSPA1BP0DMV9 641 aaKnown RBP21.38■■□□□ 1.01
TSSC4-201ENST00000333256 MORN1Q5T089 497 aa21.38■■□□□ 1.01
TSSC4-201ENST00000333256 PIK3AP1Q6ZUJ8 805 aa21.38■■□□□ 1.01
TSSC4-201ENST00000333256 DPP9Q86TI2 863 aa21.38■■□□□ 1.01
TSSC4-201ENST00000333256 ABRAQ8N0Z2 381 aa21.38■■□□□ 1.01
TSSC4-201ENST00000333256 ANO3Q9BYT9 981 aa21.38■■□□□ 1.01
TSSC4-201ENST00000333256 MAP3K20Q9NYL2 800 aaKnown RBP21.38■■□□□ 1.01
TSSC4-201ENST00000333256 ASTN1O14525 1302 aa21.38■■□□□ 1.01
TSSC4-201ENST00000333256 SOWAHBA6NEL2 793 aa21.37■■□□□ 1.01
TSSC4-201ENST00000333256 EIF2AK2P19525 551 aaKnown RBP21.37■■□□□ 1.01
TSSC4-201ENST00000333256 FAM133AQ8N9E0 248 aa21.37■■□□□ 1.01
TSSC4-201ENST00000333256 RMDN3Q96TC7 470 aa21.37■■□□□ 1.01
TSSC4-201ENST00000333256 FOXP1Q9H334 677 aaPredicted RBP21.37■■□□□ 1.01
TSSC4-201ENST00000333256 GABRQQ9UN88 632 aa21.37■■□□□ 1.01
TSSC4-201ENST00000333256 ZDHHC9Q9Y397 364 aa21.37■■□□□ 1.01
TSSC4-201ENST00000333256 PLXNB2O15031 1838 aa21.37■■□□□ 1.01
TSSC4-201ENST00000333256 RBBP6Q7Z6E9 1792 aaKnown RBP21.37■■□□□ 1.01
TSSC4-201ENST00000333256 CCDC194A0A1B0GVG4 234 aa21.37■■□□□ 1.01
TSSC4-201ENST00000333256 NOSTRINQ8IVI9 506 aa21.37■■□□□ 1.01
TSSC4-201ENST00000333256 SAMD3Q8N6K7 520 aa21.37■■□□□ 1.01
TSSC4-201ENST00000333256 ERO1AQ96HE7 468 aa21.37■■□□□ 1.01
TSSC4-201ENST00000333256 ZFP91Q96JP5 570 aaPredicted RBP21.37■■□□□ 1.01
TSSC4-201ENST00000333256 FGD4Q96M96 766 aa21.37■■□□□ 1.01
TSSC4-201ENST00000333256 NUDT12Q9BQG2 462 aa21.37■■□□□ 1.01
TSSC4-201ENST00000333256 GJD2Q9UKL4 321 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms