RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 EIF3BP55884 814 aaKnown RBP9.27□□□□□ -0.93
SKA2-201ENST00000330137 MRPS35P82673 323 aaKnown RBP9.27□□□□□ -0.93
SKA2-201ENST00000330137 PPP1R7Q15435 360 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 EPHA10Q5JZY3 1008 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 HIBCHQ6NVY1 386 aaPredicted RBP9.27□□□□□ -0.93
SKA2-201ENST00000330137 APOA5Q6Q788 366 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 FAM43BQ6ZT52 329 aaPredicted RBP9.27□□□□□ -0.93
SKA2-201ENST00000330137 LRRC59Q96AG4 307 aaKnown RBP9.27□□□□□ -0.93
SKA2-201ENST00000330137 CHMP6Q96FZ7 201 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 CCDC134Q9H6E4 229 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 PPANQ9NQ55 473 aaKnown RBP9.27□□□□□ -0.93
SKA2-201ENST00000330137 RGL1Q9NZL6 768 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 ZFATQ9P243 1243 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 BAIAP2L1Q9UHR4 511 aa9.27□□□□□ -0.93
SKA2-201ENST00000330137 BTBD11A6QL63 1104 aa9.26□□□□□ -0.93
SKA2-201ENST00000330137 H0YGN5 161 aa9.26□□□□□ -0.93
SKA2-201ENST00000330137 DRD4P21917 467 aa9.26□□□□□ -0.93
SKA2-201ENST00000330137 HOXC9P31274 260 aa9.26□□□□□ -0.93
SKA2-201ENST00000330137 PPP2R5BQ15173 497 aa9.26□□□□□ -0.93
SKA2-201ENST00000330137 ACCSLQ4AC99 568 aa9.26□□□□□ -0.93
SKA2-201ENST00000330137 CHST3Q7LGC8 479 aa9.26□□□□□ -0.93
SKA2-201ENST00000330137 CPLX4Q7Z7G2 160 aa9.26□□□□□ -0.93
SKA2-201ENST00000330137 PARD3BQ8TEW8 1205 aa9.26□□□□□ -0.93
SKA2-201ENST00000330137 STAMBPL1Q96FJ0 436 aa9.26□□□□□ -0.93
SKA2-201ENST00000330137 LACRTQ9GZZ8 138 aa9.26□□□□□ -0.93
SKA2-201ENST00000330137 VPS16Q9H269 839 aa9.26□□□□□ -0.93
SKA2-201ENST00000330137 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.26□□□□□ -0.932e-6■■□□□ 12.5
SKA2-201ENST00000330137 CTNND2Q9UQB3 1225 aa9.26□□□□□ -0.93
SKA2-201ENST00000330137 NFS1Q9Y697 457 aa9.26□□□□□ -0.93
SKA2-201ENST00000330137 B4DLN1 442 aa9.26□□□□□ -0.93
SKA2-201ENST00000330137 ZBTB43O43298 467 aa9.26□□□□□ -0.93
SKA2-201ENST00000330137 HOXA7P31268 230 aaPredicted RBP9.26□□□□□ -0.93
SKA2-201ENST00000330137 KIF5BP33176 963 aa9.26□□□□□ -0.93
SKA2-201ENST00000330137 MAGEA8P43361 318 aa9.26□□□□□ -0.93
SKA2-201ENST00000330137 KLHL10Q6JEL2 608 aa9.26□□□□□ -0.93
SKA2-201ENST00000330137 PIGWQ7Z7B1 504 aa9.26□□□□□ -0.93
SKA2-201ENST00000330137 CSRNP2Q9H175 543 aa9.26□□□□□ -0.93
SKA2-201ENST00000330137 PAPOLBQ9NRJ5 636 aaKnown RBP9.26□□□□□ -0.93
SKA2-201ENST00000330137 GJB4Q9NTQ9 266 aa9.26□□□□□ -0.93
SKA2-201ENST00000330137 CHCHD3Q9NX63 227 aaKnown RBP9.26□□□□□ -0.93
SKA2-201ENST00000330137 PHF8Q9UPP1 1060 aa9.26□□□□□ -0.93
SKA2-201ENST00000330137 PLAAQ9Y263 795 aa9.26□□□□□ -0.93
SKA2-201ENST00000330137 SIPA1L3O60292 1781 aaPredicted RBP9.26□□□□□ -0.93
SKA2-201ENST00000330137 ADAMTS7Q9UKP4 1686 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 COL16A1Q07092 1604 aaPredicted RBP9.25□□□□□ -0.93
SKA2-201ENST00000330137 COL22A1Q8NFW1 1626 aaPredicted RBP9.25□□□□□ -0.93
SKA2-201ENST00000330137 RASSF10A6NK89 507 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 FGAP02671 866 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 IGKV5-2P06315 115 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 PARP1P09874 1014 aaKnown RBP9.25□□□□□ -0.93
SKA2-201ENST00000330137 STX17P56962 302 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 TNNC1P63316 161 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 DYNC1I2Q13409 638 aaKnown RBP9.25□□□□□ -0.93
SKA2-201ENST00000330137 EZH2Q15910 746 aaKnown RBP9.25□□□□□ -0.93
SKA2-201ENST00000330137 ERMARDQ5T6L9 678 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 FAM114A1Q8IWE2 563 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 NGDNQ8NEJ9 315 aaKnown RBP9.25□□□□□ -0.93
SKA2-201ENST00000330137 RAPGEF5Q92565 580 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 ZNF570Q96NI8 536 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 TSC22D3Q99576 134 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 METTL22Q9BUU2 404 aaPredicted RBP9.25□□□□□ -0.93
SKA2-201ENST00000330137 EDEM3Q9BZQ6 932 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 AHDC1Q5TGY3 1603 aaPredicted RBP9.25□□□□□ -0.93
SKA2-201ENST00000330137 AFF2P51816 1311 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 HEXIM1O94992 359 aaKnown RBP9.25□□□□□ -0.93
SKA2-201ENST00000330137 SSBP05455 408 aaKnown RBP eCLIP9.25□□□□□ -0.93
SKA2-201ENST00000330137 IMPDH2P12268 514 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 TMED8Q6PL24 325 aaPredicted RBP9.25□□□□□ -0.93
SKA2-201ENST00000330137 GIGYF2Q6Y7W6 1299 aaKnown RBP9.25□□□□□ -0.93
SKA2-201ENST00000330137 DIS3L2Q8IYB7 885 aaKnown RBP9.25□□□□□ -0.93
SKA2-201ENST00000330137 TRIM22Q8IYM9 498 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 NELFBQ8WX92 580 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 APPBP2Q92624 585 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 ZBTB10Q96DT7 871 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 THOC1Q96FV9 657 aaKnown RBP9.25□□□□□ -0.93
SKA2-201ENST00000330137 BORCS6Q96GS4 357 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 IFT74Q96LB3 600 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 CCDC42Q96M95 316 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 ERGIC2Q96RQ1 377 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 SEC31BQ9NQW1 1179 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 EXOC1Q9NV70 894 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 TAB2Q9NYJ8 693 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 NFU1Q9UMS0 254 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 PLAGL2Q9UPG8 496 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 LRP6O75581 1613 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 PHRF1Q9P1Y6 1649 aaKnown RBP9.25□□□□□ -0.93
SKA2-201ENST00000330137 ATRNO75882 1429 aa9.25□□□□□ -0.93
SKA2-201ENST00000330137 FRMD3A2A2Y4 597 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 RCCD1A6NED2 376 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 PPFIA2O75334 1257 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 AP1G2O75843 785 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 DEXIO95424 95 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 SKIV2L2P42285 1042 aaKnown RBP9.24□□□□□ -0.93
SKA2-201ENST00000330137 CARSP49589 748 aaKnown RBP9.24□□□□□ -0.93
SKA2-201ENST00000330137 SH3BGRP55822 239 aaPredicted RBP9.24□□□□□ -0.93
SKA2-201ENST00000330137 CTDSPL2Q05D32 466 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 TBC1D25Q3MII6 688 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 AMOTQ4VCS5 1084 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 RRAGBQ5VZM2 374 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms