RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 POLR2FP61218 127 aaKnown RBP13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 EXOC3L4Q17RC7 722 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 SUSD4Q5VX71 490 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 USP17L1Q7RTZ2 530 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 ARMC9Q7Z3E5 817 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 PPFIBP2Q8ND30 876 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 ZNF277Q9NRM2 450 aaPredicted RBP13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 STAT2P52630 851 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 SLC12A2P55011 1212 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 SND1Q7KZF4 910 aaKnown RBP eCLIP13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 TTLL6Q8N841 843 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 RSAD2Q8WXG1 361 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 RIC8AQ9NPQ8 531 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 PLCB1Q9NQ66 1216 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 STK17AQ9UEE5 414 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 NCAPD2Q15021 1401 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 PRKAB2O43741 272 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 GDF11O95390 407 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 MMP10P09238 476 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 CIAPIN1Q6FI81 312 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 PI16Q6UXB8 463 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 KCTD1Q719H9 257 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 RSPH3Q86UC2 560 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 FAM160B2Q86V87 743 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 TRIM50Q86XT4 487 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 P3H4Q92791 437 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 ATP2A3Q93084 1043 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 DHTKD1Q96HY7 919 aaPredicted RBP13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 SRP68Q9UHB9 627 aaKnown RBP13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 MKRN1Q9UHC7 482 aaKnown RBP13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 RNF8O76064 485 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 MYL1P05976 194 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 KIF11P52732 1056 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 KRT81Q14533 505 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 ZBTB9Q96C00 473 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 NACC1Q96RE7 527 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 ANO3Q9BYT9 981 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 PUS7LQ9H0K6 701 aaKnown RBP13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 PFDN4Q9NQP4 134 aa13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 ZHX1Q9UKY1 873 aaPredicted RBP13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 BZW2Q9Y6E2 419 aaKnown RBP13.12□□□□□ -0.31
AMBRA1-201ENST00000314845 HECW2Q9P2P5 1572 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 STAM2O75886 525 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 ABCD1P33897 745 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 PTK2Q05397 1052 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 RASGRF1Q13972 1273 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 DALRD3Q5D0E6 543 aaKnown RBP13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 RETREG2Q8NC44 543 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 MASTLQ96GX5 879 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 RPS6KC1Q96S38 1066 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 ARAP3Q8WWN8 1544 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 SH2B2O14492 632 aaPredicted RBP13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 CIB2O75838 187 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 RFX1P22670 979 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 TPD52P55327 224 aaPredicted RBP13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 ELF2Q15723 593 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 TBCKQ8TEA7 893 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 GRK7Q8WTQ7 553 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 NT5C1BQ96P26 610 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 AP5M1Q9H0R1 490 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 DDX41Q9UJV9 622 aaKnown RBP13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 CYP27B1O15528 508 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 SORBS3O60504 671 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 NSFP46459 744 aaKnown RBP13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 IGBP1P78318 339 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 KRT71Q3SY84 523 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 SCYL2Q6P3W7 929 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 STMN2Q93045 179 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 ANKFY1Q9P2R3 1169 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 SEPT9Q9UHD8 586 aaPredicted RBP13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 ABCC12Q96J65 1359 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 KCNK3O14649 394 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 HOXA7P31268 230 aaPredicted RBP13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 MAPK8IP2Q13387 824 aaPredicted RBP13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 DIXDC1Q155Q3 683 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 DENND2CQ68D51 928 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 ZNF710Q8N1W2 664 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 PIGSQ96S52 555 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 NUB1Q9Y5A7 615 aa13.11□□□□□ -0.31
AMBRA1-201ENST00000314845 ADGRL3Q9HAR2 1447 aa13.1□□□□□ -0.31
AMBRA1-201ENST00000314845 PRPF3O43395 683 aaKnown RBP13.1□□□□□ -0.31
AMBRA1-201ENST00000314845 SASH1O94885 1247 aa13.1□□□□□ -0.31
AMBRA1-201ENST00000314845 EEF1GP26641 437 aaKnown RBP13.1□□□□□ -0.31
AMBRA1-201ENST00000314845 COPB1P53618 953 aaKnown RBP13.1□□□□□ -0.31
AMBRA1-201ENST00000314845 KIF23Q02241 960 aaPredicted RBP13.1□□□□□ -0.31
AMBRA1-201ENST00000314845 SYDE2Q5VT97 1194 aa13.1□□□□□ -0.31
AMBRA1-201ENST00000314845 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.1□□□□□ -0.31
AMBRA1-201ENST00000314845 VPS37BQ9H9H4 285 aa13.1□□□□□ -0.31
AMBRA1-201ENST00000314845 I3L4J1 428 aa13.1□□□□□ -0.31
AMBRA1-201ENST00000314845 TLR3O15455 904 aaKnown RBP13.1□□□□□ -0.31
AMBRA1-201ENST00000314845 DGKHQ86XP1 1220 aa13.1□□□□□ -0.31
AMBRA1-201ENST00000314845 TUBGCP2Q9BSJ2 902 aa13.1□□□□□ -0.31
AMBRA1-201ENST00000314845 ZSWIM5Q9P217 1185 aa13.1□□□□□ -0.31
AMBRA1-201ENST00000314845 USP17L8P0C7I0 530 aa13.1□□□□□ -0.31
AMBRA1-201ENST00000314845 NR2F2P24468 414 aa13.1□□□□□ -0.31
AMBRA1-201ENST00000314845 FKBP3Q00688 224 aaKnown RBP13.1□□□□□ -0.31
AMBRA1-201ENST00000314845 MECOMQ03112 1051 aa13.1□□□□□ -0.31
AMBRA1-201ENST00000314845 RASGRP4Q8TDF6 673 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms