RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 VAT1LQ9HCJ6 419 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 H3BQF6 201 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 KIF3CO14782 793 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 RAD21O60216 631 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 KIF5CO60282 957 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 ERLIN1O75477 346 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 PRR29P0C7W0 189 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 FECHP22830 423 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 SHMT1P34896 483 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 PBX1P40424 430 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 TOB1P50616 345 aaPredicted RBP11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 TGFB2P61812 414 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 SAFBQ15424 915 aaKnown RBP eCLIP11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 SLC35G1Q2M3R5 365 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 LEKR1Q6ZMV7 388 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 APTXQ7Z2E3 356 aaKnown RBP11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 NLGN2Q8NFZ4 835 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 GPKOWQ92917 476 aaPredicted RBP eCLIP11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 CCDC51Q96ER9 411 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 DESI2Q9BSY9 194 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 RNF26Q9BY78 433 aaPredicted RBP11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 FAM107BQ9H098 131 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 DNAJC18Q9H819 358 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 ANKZF1Q9H8Y5 726 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 MAD2L2Q9UI95 211 aa11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 SRPRBQ9Y5M8 271 aaKnown RBP11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 DDX60LQ5H9U9 1706 aaKnown RBP11.58□□□□□ -0.56
APOBEC3F-201ENST00000308521 POLR2DO15514 142 aaKnown RBP11.57□□□□□ -0.56
APOBEC3F-201ENST00000308521 PRPF3O43395 683 aaKnown RBP11.57□□□□□ -0.56
APOBEC3F-201ENST00000308521 ACTN4O43707 911 aaKnown RBP11.57□□□□□ -0.56
APOBEC3F-201ENST00000308521 EARS2Q5JPH6 523 aaKnown RBP11.57□□□□□ -0.56
APOBEC3F-201ENST00000308521 RSBN1LQ6PCB5 846 aaPredicted RBP11.57□□□□□ -0.56
APOBEC3F-201ENST00000308521 SAMSN1Q9NSI8 373 aaKnown RBP11.57□□□□□ -0.56
APOBEC3F-201ENST00000308521 SERPINA10Q9UK55 444 aa11.57□□□□□ -0.56
APOBEC3F-201ENST00000308521 CNTNAP5Q8WYK1 1306 aa11.57□□□□□ -0.56
APOBEC3F-201ENST00000308521 USP17L5A8MUK1 530 aa11.57□□□□□ -0.56
APOBEC3F-201ENST00000308521 CYTH3O43739 400 aa11.57□□□□□ -0.56
APOBEC3F-201ENST00000308521 EIF3JO75822 258 aaKnown RBP11.57□□□□□ -0.56
APOBEC3F-201ENST00000308521 RCAN1P53805 252 aa11.57□□□□□ -0.56
APOBEC3F-201ENST00000308521 GYS2P54840 703 aa11.57□□□□□ -0.56
APOBEC3F-201ENST00000308521 CXCL9Q07325 125 aa11.57□□□□□ -0.56
APOBEC3F-201ENST00000308521 RBM26Q5T8P6 1007 aaKnown RBP11.57□□□□□ -0.56
APOBEC3F-201ENST00000308521 SPATA1Q5VX52 437 aa11.57□□□□□ -0.56
APOBEC3F-201ENST00000308521 PPFIBP1Q86W92 1011 aa11.57□□□□□ -0.56
APOBEC3F-201ENST00000308521 NIM1KQ8IY84 436 aa11.57□□□□□ -0.56
APOBEC3F-201ENST00000308521 UBA5Q9GZZ9 404 aa11.57□□□□□ -0.56
APOBEC3F-201ENST00000308521 CABP5Q9NP86 173 aa11.57□□□□□ -0.56
APOBEC3F-201ENST00000308521 LCMT1Q9UIC8 334 aa11.57□□□□□ -0.56
APOBEC3F-201ENST00000308521 CEP131Q9UPN4 1083 aa11.57□□□□□ -0.56
APOBEC3F-201ENST00000308521 FRMPD2Q68DX3 1309 aaPredicted RBP11.57□□□□□ -0.56
APOBEC3F-201ENST00000308521 SOWAHDA6NJG2 315 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 HLA-DOAP06340 250 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 USP8P40818 1118 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 RASSF7Q02833 373 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 MTF1Q14872 753 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 RAD9BQ6WBX8 426 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 CDAN1Q8IWY9 1227 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 CTAGE1Q96RT6 745 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 GBP3Q9H0R5 595 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 TCP11L1Q9NUJ3 509 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 L1RE1Q9UN81 338 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 NFKBIEO00221 500 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 GDF11O95390 407 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 VIL1P09327 827 aaKnown RBP11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 KIF5BP33176 963 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 CORO7P57737 925 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 PPP2R5BQ15173 497 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 HSP90AA4PQ58FG1 418 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 PACS2Q86VP3 889 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 EFCAB13Q8IY85 973 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 TRMT44Q8IYL2 757 aaKnown RBP11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 OGFOD1Q8N543 542 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 GPATCH11Q8N954 259 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 DRC1Q96MC2 740 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 TAOK3Q9H2K8 898 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 VEZTQ9HBM0 779 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 MTMR4Q9NYA4 1195 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 ZNRF3Q9ULT6 936 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 SUFUQ9UMX1 484 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 ITIH6Q6UXX5 1313 aa11.56□□□□□ -0.56
APOBEC3F-201ENST00000308521 KLRF2D3W0D1 207 aa11.55□□□□□ -0.56
APOBEC3F-201ENST00000308521 PTGER2P43116 358 aa11.55□□□□□ -0.56
APOBEC3F-201ENST00000308521 FKBP1AP62942 108 aaKnown RBP11.55□□□□□ -0.56
APOBEC3F-201ENST00000308521 RBL2Q08999 1139 aa11.55□□□□□ -0.56
APOBEC3F-201ENST00000308521 SPECC1Q5M775 1068 aa11.55□□□□□ -0.56
APOBEC3F-201ENST00000308521 CDKAL1Q5VV42 579 aa11.55□□□□□ -0.56
APOBEC3F-201ENST00000308521 IGSF22Q8N9C0 903 aa11.55□□□□□ -0.56
APOBEC3F-201ENST00000308521 ANKRD20A12PQ8NF67 263 aa11.55□□□□□ -0.56
APOBEC3F-201ENST00000308521 ANKS1AQ92625 1134 aa11.55□□□□□ -0.56
APOBEC3F-201ENST00000308521 SGIP1Q9BQI5 828 aa11.55□□□□□ -0.56
APOBEC3F-201ENST00000308521 MYO1AQ9UBC5 1043 aa11.55□□□□□ -0.56
APOBEC3F-201ENST00000308521 ADD3Q9UEY8 706 aaKnown RBP11.55□□□□□ -0.56
APOBEC3F-201ENST00000308521 CTAGE9A4FU28 777 aa11.55□□□□□ -0.56
APOBEC3F-201ENST00000308521 MFAP3LO75121 409 aa11.55□□□□□ -0.56
APOBEC3F-201ENST00000308521 MAP2K2P36507 400 aa11.55□□□□□ -0.56
APOBEC3F-201ENST00000308521 LMAN1P49257 510 aa11.55□□□□□ -0.56
APOBEC3F-201ENST00000308521 GRIN1Q05586 938 aa11.55□□□□□ -0.56
APOBEC3F-201ENST00000308521 GRM4Q14833 912 aa11.55□□□□□ -0.56
APOBEC3F-201ENST00000308521 WHAMMP3Q1A5X7 153 aa11.55□□□□□ -0.56
APOBEC3F-201ENST00000308521 CNGA4Q8IV77 575 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms