RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 BBOX1O75936 387 aa17.98■□□□□ 0.47
BRD3-201ENST00000303407 GRAPQ13588 217 aa17.98■□□□□ 0.47
BRD3-201ENST00000303407 GNPTABQ3T906 1256 aa17.98■□□□□ 0.47
BRD3-201ENST00000303407 GRAPLQ8TC17 118 aaPredicted RBP17.98■□□□□ 0.47
BRD3-201ENST00000303407 TRIM7Q9C029 511 aa17.98■□□□□ 0.47
BRD3-201ENST00000303407 CDHR2Q9BYE9 1310 aa17.98■□□□□ 0.47
BRD3-201ENST00000303407 SOWAHDA6NJG2 315 aa17.98■□□□□ 0.47
BRD3-201ENST00000303407 CD19P15391 556 aa17.98■□□□□ 0.47
BRD3-201ENST00000303407 TCP1P17987 556 aaKnown RBP17.98■□□□□ 0.47
BRD3-201ENST00000303407 DENND2CQ68D51 928 aa17.98■□□□□ 0.47
BRD3-201ENST00000303407 KRT26Q7Z3Y9 468 aa17.98■□□□□ 0.47
BRD3-201ENST00000303407 GINS2Q9Y248 185 aa17.98■□□□□ 0.47
BRD3-201ENST00000303407 SSX2IPQ9Y2D8 614 aa17.98■□□□□ 0.47
BRD3-201ENST00000303407 TMC4Q7Z404 712 aa17.97■□□□□ 0.47
BRD3-201ENST00000303407 MAIP1Q8WWC4 291 aa17.97■□□□□ 0.47
BRD3-201ENST00000303407 IQGAP1P46940 1657 aa17.97■□□□□ 0.47
BRD3-201ENST00000303407 PABPC4Q13310 644 aaKnown RBP eCLIP17.97■□□□□ 0.474e-7■■□□□ 12.8
BRD3-201ENST00000303407 CNKSR1Q969H4 720 aa17.97■□□□□ 0.47
BRD3-201ENST00000303407 KCNG1Q9UIX4 513 aa17.97■□□□□ 0.47
BRD3-201ENST00000303407 DIP2CQ9Y2E4 1556 aa17.97■□□□□ 0.47
BRD3-201ENST00000303407 PRPF6O94906 941 aaKnown RBP17.97■□□□□ 0.47
BRD3-201ENST00000303407 ALDH3A1P30838 453 aa17.97■□□□□ 0.47
BRD3-201ENST00000303407 LIG4P49917 911 aa17.97■□□□□ 0.47
BRD3-201ENST00000303407 CACNB1Q02641 598 aaPredicted RBP17.97■□□□□ 0.47
BRD3-201ENST00000303407 EXOC3L4Q17RC7 722 aa17.97■□□□□ 0.47
BRD3-201ENST00000303407 GPR101Q96P66 508 aaPredicted RBP17.97■□□□□ 0.47
BRD3-201ENST00000303407 ZNF408Q9H9D4 720 aa17.97■□□□□ 0.47
BRD3-201ENST00000303407 PARP2Q9UGN5 583 aa17.97■□□□□ 0.47
BRD3-201ENST00000303407 CDC23Q9UJX2 597 aa17.97■□□□□ 0.47
BRD3-201ENST00000303407 ENC1O14682 589 aa17.97■□□□□ 0.47
BRD3-201ENST00000303407 MYL1P05976 194 aa17.97■□□□□ 0.47
BRD3-201ENST00000303407 SRGAP1Q7Z6B7 1085 aa17.97■□□□□ 0.47
BRD3-201ENST00000303407 MB21D2Q8IYB1 491 aaPredicted RBP17.97■□□□□ 0.47
BRD3-201ENST00000303407 GJA10Q969M2 543 aa17.97■□□□□ 0.47
BRD3-201ENST00000303407 DBNDD1Q9H9R9 158 aa17.97■□□□□ 0.47
BRD3-201ENST00000303407 ZDHHC9Q9Y397 364 aa17.97■□□□□ 0.47
BRD3-201ENST00000303407 IRX3P78415 501 aaPredicted RBP17.96■□□□□ 0.47
BRD3-201ENST00000303407 LRCH2Q5VUJ6 765 aa17.96■□□□□ 0.47
BRD3-201ENST00000303407 GDF11O95390 407 aa17.96■□□□□ 0.47
BRD3-201ENST00000303407 UBXN2AP68543 259 aa17.96■□□□□ 0.47
BRD3-201ENST00000303407 CSRNP1Q96S65 589 aa17.96■□□□□ 0.47
BRD3-201ENST00000303407 IVNS1ABPQ9Y6Y0 642 aa17.96■□□□□ 0.47
BRD3-201ENST00000303407 CTNNA1P35221 906 aaKnown RBP17.96■□□□□ 0.47
BRD3-201ENST00000303407 ARL1P40616 181 aaPredicted RBP17.96■□□□□ 0.47
BRD3-201ENST00000303407 TRIM6Q9C030 488 aaPredicted RBP17.96■□□□□ 0.47
BRD3-201ENST00000303407 FYB2Q5VWT5 728 aa17.96■□□□□ 0.47
BRD3-201ENST00000303407 ARMCX5Q6P1M9 558 aa17.96■□□□□ 0.47
BRD3-201ENST00000303407 THAP9Q9H5L6 903 aa17.96■□□□□ 0.47
BRD3-201ENST00000303407 WDR19Q8NEZ3 1342 aa17.96■□□□□ 0.47
BRD3-201ENST00000303407 CLRN2A0PK11 232 aa17.96■□□□□ 0.46
BRD3-201ENST00000303407 PDE6CP51160 858 aa17.96■□□□□ 0.46
BRD3-201ENST00000303407 SNX16P57768 344 aa17.96■□□□□ 0.46
BRD3-201ENST00000303407 MYL7Q01449 175 aa17.96■□□□□ 0.46
BRD3-201ENST00000303407 STK36Q9NRP7 1315 aa17.95■□□□□ 0.46
BRD3-201ENST00000303407 GOLGA8KD6RF30 607 aa17.95■□□□□ 0.46
BRD3-201ENST00000303407 TRIM37O94972 964 aa17.95■□□□□ 0.46
BRD3-201ENST00000303407 PLCG1P19174 1290 aa17.95■□□□□ 0.46
BRD3-201ENST00000303407 CDK8P49336 464 aa17.95■□□□□ 0.46
BRD3-201ENST00000303407 STK17AQ9UEE5 414 aa17.95■□□□□ 0.46
BRD3-201ENST00000303407 KIAA1210Q9ULL0 1709 aa17.95■□□□□ 0.46
BRD3-201ENST00000303407 INPP5BP32019 993 aa17.95■□□□□ 0.46
BRD3-201ENST00000303407 DMP1Q13316 513 aaPredicted RBP17.95■□□□□ 0.46
BRD3-201ENST00000303407 KRT71Q3SY84 523 aa17.95■□□□□ 0.46
BRD3-201ENST00000303407 CFAP157Q5JU67 520 aa17.95■□□□□ 0.46
BRD3-201ENST00000303407 ANKRD13CQ8N6S4 541 aa17.95■□□□□ 0.46
BRD3-201ENST00000303407 SH3RF3Q8TEJ3 882 aaPredicted RBP17.95■□□□□ 0.46
BRD3-201ENST00000303407 SERPINB13Q9UIV8 391 aa17.95■□□□□ 0.46
BRD3-201ENST00000303407 TRPC5Q9UL62 973 aaPredicted RBP17.95■□□□□ 0.46
BRD3-201ENST00000303407 GCFC2P16383 781 aaKnown RBP17.95■□□□□ 0.46
BRD3-201ENST00000303407 NR2F2P24468 414 aa17.95■□□□□ 0.46
BRD3-201ENST00000303407 UBE2SQ16763 222 aa17.95■□□□□ 0.46
BRD3-201ENST00000303407 KMT5BQ4FZB7 885 aa17.95■□□□□ 0.46
BRD3-201ENST00000303407 ACRBPQ8NEB7 543 aa17.95■□□□□ 0.46
BRD3-201ENST00000303407 GLG1Q92896 1179 aa17.95■□□□□ 0.46
BRD3-201ENST00000303407 ALDH8A1Q9H2A2 487 aaPredicted RBP17.95■□□□□ 0.46
BRD3-201ENST00000303407 CPS1P31327 1500 aa17.95■□□□□ 0.46
BRD3-201ENST00000303407 ATP1A3P13637 1013 aa17.94■□□□□ 0.46
BRD3-201ENST00000303407 RABGGTAQ92696 567 aa17.94■□□□□ 0.46
BRD3-201ENST00000303407 LY9Q9HBG7 655 aa17.94■□□□□ 0.46
BRD3-201ENST00000303407 SH3GLB2Q9NR46 395 aa17.94■□□□□ 0.46
BRD3-201ENST00000303407 PIK3C2BO00750 1634 aa17.94■□□□□ 0.46
BRD3-201ENST00000303407 SEC31AO94979 1220 aaKnown RBP17.94■□□□□ 0.46
BRD3-201ENST00000303407 CYP2D6P10635 497 aa17.94■□□□□ 0.46
BRD3-201ENST00000303407 MAN2A1Q16706 1144 aa17.94■□□□□ 0.46
BRD3-201ENST00000303407 CLEC4GQ6UXB4 293 aa17.94■□□□□ 0.46
BRD3-201ENST00000303407 TMTC3Q6ZXV5 915 aa17.94■□□□□ 0.46
BRD3-201ENST00000303407 RETREG2Q8NC44 543 aa17.94■□□□□ 0.46
BRD3-201ENST00000303407 PPM1EQ8WY54 764 aa17.94■□□□□ 0.46
BRD3-201ENST00000303407 ZNF577Q9BSK1 485 aa17.94■□□□□ 0.46
BRD3-201ENST00000303407 QTRT2Q9H974 415 aaKnown RBP17.94■□□□□ 0.46
BRD3-201ENST00000303407 RASA3Q14644 834 aa17.94■□□□□ 0.46
BRD3-201ENST00000303407 ODR4Q5SWX8 454 aa17.94■□□□□ 0.46
BRD3-201ENST00000303407 RNF34Q969K3 372 aa17.94■□□□□ 0.46
BRD3-201ENST00000303407 RIC8AQ9NPQ8 531 aa17.94■□□□□ 0.46
BRD3-201ENST00000303407 POTEDQ86YR6 584 aa17.94■□□□□ 0.46
BRD3-201ENST00000303407 ISCA1Q9BUE6 129 aa17.94■□□□□ 0.46
BRD3-201ENST00000303407 C1orf112Q9NSG2 853 aa17.94■□□□□ 0.46
BRD3-201ENST00000303407 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.94■□□□□ 0.46
BRD3-201ENST00000303407 DAPK3O43293 454 aa17.94■□□□□ 0.46
BRD3-201ENST00000303407 H2AFZP0C0S5 128 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms