RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 GOLGA8SH3BPF8 625 aa18.32■□□□□ 0.52
TSPAN3-201ENST00000267970 DNAJC10Q8IXB1 793 aa18.32■□□□□ 0.52
TSPAN3-201ENST00000267970 IFNL3Q8IZI9 196 aa18.32■□□□□ 0.52
TSPAN3-201ENST00000267970 MAIP1Q8WWC4 291 aa18.32■□□□□ 0.52
TSPAN3-201ENST00000267970 KRT82Q9NSB4 513 aa18.32■□□□□ 0.52
TSPAN3-201ENST00000267970 HEXIM1O94992 359 aaKnown RBP18.32■□□□□ 0.52
TSPAN3-201ENST00000267970 NCF2P19878 526 aaPredicted RBP18.32■□□□□ 0.52
TSPAN3-201ENST00000267970 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.32■□□□□ 0.52
TSPAN3-201ENST00000267970 BAG5Q9UL15 447 aa18.32■□□□□ 0.52
TSPAN3-201ENST00000267970 ARHGAP4P98171 946 aa18.32■□□□□ 0.52
TSPAN3-201ENST00000267970 ASPHQ12797 758 aa18.32■□□□□ 0.52
TSPAN3-201ENST00000267970 SMCR8Q8TEV9 937 aaPredicted RBP18.32■□□□□ 0.52
TSPAN3-201ENST00000267970 KIAA1024Q9UPX6 916 aa18.32■□□□□ 0.52
TSPAN3-201ENST00000267970 FAM133AQ8N9E0 248 aa18.32■□□□□ 0.52
TSPAN3-201ENST00000267970 HMGB2P26583 209 aaKnown RBP18.31■□□□□ 0.52
TSPAN3-201ENST00000267970 CNGA1P29973 690 aa18.31■□□□□ 0.52
TSPAN3-201ENST00000267970 SPDYE2BA6NHP3 402 aa18.31■□□□□ 0.52
TSPAN3-201ENST00000267970 SPDYE6P0CI01 402 aa18.31■□□□□ 0.52
TSPAN3-201ENST00000267970 SLC8A1P32418 973 aa18.31■□□□□ 0.52
TSPAN3-201ENST00000267970 N4BP2L2Q92802 583 aaPredicted RBP18.31■□□□□ 0.52
TSPAN3-201ENST00000267970 F5H423 210 aaPredicted RBP18.31■□□□□ 0.52
TSPAN3-201ENST00000267970 NPATQ14207 1427 aa18.31■□□□□ 0.52
TSPAN3-201ENST00000267970 MYL7Q01449 175 aa18.31■□□□□ 0.52
TSPAN3-201ENST00000267970 PABPC4Q13310 644 aaKnown RBP eCLIP18.31■□□□□ 0.524e-7■■■■□ 24.1
TSPAN3-201ENST00000267970 RYBPQ8N488 228 aaPredicted RBP18.31■□□□□ 0.52
TSPAN3-201ENST00000267970 TLR7Q9NYK1 1049 aaKnown RBP18.31■□□□□ 0.52
TSPAN3-201ENST00000267970 ACTN1P12814 892 aa18.31■□□□□ 0.52
TSPAN3-201ENST00000267970 SULF1Q8IWU6 871 aa18.31■□□□□ 0.52
TSPAN3-201ENST00000267970 TTC30BQ8N4P2 665 aa18.31■□□□□ 0.52
TSPAN3-201ENST00000267970 EXT2Q93063 718 aa18.31■□□□□ 0.52
TSPAN3-201ENST00000267970 SDCCAG3Q96C92 435 aa18.31■□□□□ 0.52
TSPAN3-201ENST00000267970 OLA1Q9NTK5 396 aaKnown RBP18.31■□□□□ 0.52
TSPAN3-201ENST00000267970 IFT140Q96RY7 1462 aa18.31■□□□□ 0.52
TSPAN3-201ENST00000267970 TNKSO95271 1327 aa18.31■□□□□ 0.52
TSPAN3-201ENST00000267970 M0QZ92 97 aa18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 GPC4O75487 556 aa18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 HSPD1P10809 573 aaKnown RBP18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 TAF11Q15544 211 aa18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 GSPT2Q8IYD1 628 aaKnown RBP18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 ZNF500O60304 480 aaPredicted RBP18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 GNA14O95837 355 aa18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 IBTKQ9P2D0 1353 aaPredicted RBP18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 SUN1O94901 812 aa18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 OR52Z1P0C646 297 aa18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 DMTNQ08495 405 aa18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 ARID5BQ14865 1188 aa18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 EXOC3L4Q17RC7 722 aa18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 Q9H521 79 aa18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 HSPA2P54652 639 aa18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 NUDCD3Q8IVD9 361 aa18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 CCNYQ8ND76 341 aa18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 TUBGCP2Q9BSJ2 902 aa18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 NOVA2Q9UNW9 492 aaKnown RBP18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 ZMYM6O95789 1325 aa18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 hCG_2014768A0A024R1R8 64 aa18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 OSTNP61366 133 aa18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 ALKBH8Q96BT7 664 aaKnown RBP18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 FGD4Q96M96 766 aa18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 FANCBQ8NB91 859 aa18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 KCNV2Q8TDN2 545 aa18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 NLRP7Q8WX94 980 aa18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 MAML1Q92585 1016 aa18.3■□□□□ 0.52
TSPAN3-201ENST00000267970 TNRQ92752 1358 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 KLRF2D3W0D1 207 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 GFPT2O94808 682 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 SNAP25P60880 206 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 CACTINQ8WUQ7 758 aaKnown RBP18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 TNNC2P02585 160 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 FGAP02671 866 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 H2AFZP0C0S5 128 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 ADORA1P30542 326 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 KCTD1Q719H9 257 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 H2AFVQ71UI9 128 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 FANCAO15360 1455 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 CTNND1O60716 968 aaKnown RBP18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 IL13P35225 146 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 MAP3K21Q5TCX8 1036 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 ATP6V1E2Q96A05 226 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 CCDC51Q96ER9 411 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 SAMSN1Q9NSI8 373 aaKnown RBP18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 PASKQ96RG2 1323 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 MAPKBP1O60336 1514 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 P4HA1P13674 534 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 FAM98CQ17RN3 349 aaKnown RBP18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 SPATA1Q5VX52 437 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 TMTC3Q6ZXV5 915 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 UNC5CLQ8IV45 518 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 PNMA1Q8ND90 353 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 NT5C3AQ9H0P0 336 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 BCAP29Q9UHQ4 241 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 SLC16A2P36021 539 aa18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 BASP1P80723 227 aaKnown RBP18.29■□□□□ 0.52
TSPAN3-201ENST00000267970 THOC2Q8NI27 1593 aaKnown RBP18.28■□□□□ 0.52
TSPAN3-201ENST00000267970 H0Y3Z8 333 aa18.28■□□□□ 0.52
TSPAN3-201ENST00000267970 IL9RQ01113 521 aa18.28■□□□□ 0.52
TSPAN3-201ENST00000267970 NNTQ13423 1086 aa18.28■□□□□ 0.52
TSPAN3-201ENST00000267970 KDM5BQ9UGL1 1544 aa18.28■□□□□ 0.52
TSPAN3-201ENST00000267970 MFSD14BQ5SR56 506 aa18.28■□□□□ 0.52
TSPAN3-201ENST00000267970 GADL1Q6ZQY3 521 aa18.28■□□□□ 0.52
TSPAN3-201ENST00000267970 IP6K1Q92551 441 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms