RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 TRAPPC10P48553 1259 aa16.62■□□□□ 0.25
XRCC1-201ENST00000262887 HDLBPQ00341 1268 aaKnown RBP16.62■□□□□ 0.25
XRCC1-201ENST00000262887 CEP85LQ5SZL2 805 aa16.62■□□□□ 0.25
XRCC1-201ENST00000262887 CENPHQ9H3R5 247 aa16.62■□□□□ 0.25
XRCC1-201ENST00000262887 DISC1Q9NRI5 854 aa16.62■□□□□ 0.25
XRCC1-201ENST00000262887 PCDHA13Q9Y5I0 950 aa16.62■□□□□ 0.25
XRCC1-201ENST00000262887 MYH10P35580 1976 aa16.62■□□□□ 0.25
XRCC1-201ENST00000262887 PNPLA7Q6ZV29 1317 aa16.62■□□□□ 0.25
XRCC1-201ENST00000262887 KCPQ6ZWJ8 1503 aa16.61■□□□□ 0.25
XRCC1-201ENST00000262887 CALRP27797 417 aaKnown RBP16.61■□□□□ 0.25
XRCC1-201ENST00000262887 MDH1P40925 334 aaKnown RBP16.61■□□□□ 0.25
XRCC1-201ENST00000262887 SEC24CP53992 1094 aa16.61■□□□□ 0.25
XRCC1-201ENST00000262887 NLRP5P59047 1200 aa16.61■□□□□ 0.25
XRCC1-201ENST00000262887 DRP2Q13474 957 aa16.61■□□□□ 0.25
XRCC1-201ENST00000262887 KCNB1Q14721 858 aa16.61■□□□□ 0.25
XRCC1-201ENST00000262887 TYW1BQ6NUM6 668 aa16.61■□□□□ 0.25
XRCC1-201ENST00000262887 SLC40A1Q9NP59 571 aa16.61■□□□□ 0.25
XRCC1-201ENST00000262887 TNS3Q68CZ2 1445 aa16.61■□□□□ 0.25
XRCC1-201ENST00000262887 FAM107AO95990 144 aa16.61■□□□□ 0.25
XRCC1-201ENST00000262887 MTIF2P46199 727 aaKnown RBP16.61■□□□□ 0.25
XRCC1-201ENST00000262887 WLSQ5T9L3 541 aa16.61■□□□□ 0.25
XRCC1-201ENST00000262887 N4BP2L2Q92802 583 aaPredicted RBP16.61■□□□□ 0.25
XRCC1-201ENST00000262887 CNOT6LQ96LI5 555 aaKnown RBP16.61■□□□□ 0.25
XRCC1-201ENST00000262887 ZSCAN10Q96SZ4 725 aaPredicted RBP16.61■□□□□ 0.25
XRCC1-201ENST00000262887 RBM12Q9NTZ6 932 aaKnown RBP16.61■□□□□ 0.25
XRCC1-201ENST00000262887 ODF2LQ9ULJ1 636 aa16.61■□□□□ 0.25
XRCC1-201ENST00000262887 ARL6IP4Q66PJ3 421 aaKnown RBP16.6■□□□□ 0.25
XRCC1-201ENST00000262887 CD302Q8IX05 232 aa16.6■□□□□ 0.25
XRCC1-201ENST00000262887 NOC4LQ9BVI4 516 aaKnown RBP16.6■□□□□ 0.25
XRCC1-201ENST00000262887 VEZTQ9HBM0 779 aa16.6■□□□□ 0.25
XRCC1-201ENST00000262887 NFU1Q9UMS0 254 aa16.6■□□□□ 0.25
XRCC1-201ENST00000262887 A0A1W2PQJ5 194 aa16.6■□□□□ 0.25
XRCC1-201ENST00000262887 CLSTN1O94985 981 aa16.6■□□□□ 0.25
XRCC1-201ENST00000262887 PAK2Q13177 524 aa16.6■□□□□ 0.25
XRCC1-201ENST00000262887 C2CD5Q86YS7 1000 aa16.6■□□□□ 0.25
XRCC1-201ENST00000262887 GIMAP8Q8ND71 665 aaPredicted RBP16.6■□□□□ 0.25
XRCC1-201ENST00000262887 TBC1D22AQ8WUA7 517 aa16.6■□□□□ 0.25
XRCC1-201ENST00000262887 MIEF2Q96C03 454 aa16.6■□□□□ 0.25
XRCC1-201ENST00000262887 ATP6V1G3Q96LB4 118 aa16.6■□□□□ 0.25
XRCC1-201ENST00000262887 TMCO5BA8MYB1 307 aa16.6■□□□□ 0.25
XRCC1-201ENST00000262887 E7EVH7 732 aa16.6■□□□□ 0.25
XRCC1-201ENST00000262887 KIF3CO14782 793 aa16.6■□□□□ 0.25
XRCC1-201ENST00000262887 NCK2O43639 380 aa16.6■□□□□ 0.25
XRCC1-201ENST00000262887 FAM153BP0C7A2 387 aa16.6■□□□□ 0.25
XRCC1-201ENST00000262887 CARSP49589 748 aaKnown RBP16.6■□□□□ 0.25
XRCC1-201ENST00000262887 KIF11P52732 1056 aa16.6■□□□□ 0.25
XRCC1-201ENST00000262887 FAM153CQ494X1 144 aa16.6■□□□□ 0.25
XRCC1-201ENST00000262887 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.6■□□□□ 0.25
XRCC1-201ENST00000262887 IQCA1Q86XH1 822 aa16.6■□□□□ 0.25
XRCC1-201ENST00000262887 SDR42E1Q8WUS8 393 aa16.6■□□□□ 0.25
XRCC1-201ENST00000262887 DUSP9Q99956 384 aaKnown RBP16.6■□□□□ 0.25
XRCC1-201ENST00000262887 GDF3Q9NR23 364 aa16.6■□□□□ 0.25
XRCC1-201ENST00000262887 FAM153AQ9UHL3 310 aa16.6■□□□□ 0.25
XRCC1-201ENST00000262887 SRRM3A6NNA2 597 aaPredicted RBP16.59■□□□□ 0.25
XRCC1-201ENST00000262887 KLRC4O43908 158 aa16.59■□□□□ 0.25
XRCC1-201ENST00000262887 RHOBTB3O94955 611 aa16.59■□□□□ 0.25
XRCC1-201ENST00000262887 NAALADL2Q58DX5 795 aa16.59■□□□□ 0.25
XRCC1-201ENST00000262887 FIGNQ5HY92 759 aa16.59■□□□□ 0.25
XRCC1-201ENST00000262887 TMED8Q6PL24 325 aaPredicted RBP16.59■□□□□ 0.25
XRCC1-201ENST00000262887 C6orf89Q6UWU4 347 aa16.59■□□□□ 0.25
XRCC1-201ENST00000262887 CCDC121Q6ZUS5 278 aa16.59■□□□□ 0.25
XRCC1-201ENST00000262887 FAM114A1Q8IWE2 563 aa16.59■□□□□ 0.25
XRCC1-201ENST00000262887 IFT81Q8WYA0 676 aa16.59■□□□□ 0.25
XRCC1-201ENST00000262887 PIK3R5Q8WYR1 880 aa16.59■□□□□ 0.25
XRCC1-201ENST00000262887 CCDC114Q96M63 670 aa16.59■□□□□ 0.25
XRCC1-201ENST00000262887 ARHGAP20Q9P2F6 1191 aa16.59■□□□□ 0.25
XRCC1-201ENST00000262887 GOLGA6L7A0A1B0GV03 622 aa16.59■□□□□ 0.25
XRCC1-201ENST00000262887 HMGB1P1B2RPK0 211 aaPredicted RBP16.59■□□□□ 0.25
XRCC1-201ENST00000262887 ERVV-2B6SEH9 535 aa16.59■□□□□ 0.25
XRCC1-201ENST00000262887 GLI1P08151 1106 aa16.59■□□□□ 0.25
XRCC1-201ENST00000262887 SLC5A1P13866 664 aa16.59■□□□□ 0.25
XRCC1-201ENST00000262887 TROAPQ12815 778 aa16.59■□□□□ 0.25
XRCC1-201ENST00000262887 TMTC3Q6ZXV5 915 aa16.59■□□□□ 0.25
XRCC1-201ENST00000262887 MREGQ8N565 214 aa16.59■□□□□ 0.25
XRCC1-201ENST00000262887 DHTKD1Q96HY7 919 aaPredicted RBP16.59■□□□□ 0.25
XRCC1-201ENST00000262887 ACTR5Q9H9F9 607 aaPredicted RBP16.59■□□□□ 0.25
XRCC1-201ENST00000262887 PLAGL2Q9UPG8 496 aa16.59■□□□□ 0.25
XRCC1-201ENST00000262887 UBR2Q8IWV8 1755 aa16.59■□□□□ 0.25
XRCC1-201ENST00000262887 IRS4O14654 1257 aaPredicted RBP16.58■□□□□ 0.25
XRCC1-201ENST00000262887 IRF6O14896 467 aa16.58■□□□□ 0.25
XRCC1-201ENST00000262887 AKR1B10O60218 316 aa16.58■□□□□ 0.25
XRCC1-201ENST00000262887 CALM1P0DP23 149 aa16.58■□□□□ 0.25
XRCC1-201ENST00000262887 CALM2P0DP24 149 aa16.58■□□□□ 0.25
XRCC1-201ENST00000262887 CALM3P0DP25 149 aa16.58■□□□□ 0.25
XRCC1-201ENST00000262887 FGFR2P21802 821 aa16.58■□□□□ 0.25
XRCC1-201ENST00000262887 ATP2B2Q01814 1243 aa16.58■□□□□ 0.25
XRCC1-201ENST00000262887 SNCBQ16143 134 aa16.58■□□□□ 0.25
XRCC1-201ENST00000262887 C1orf131Q8NDD1 294 aaKnown RBP16.58■□□□□ 0.25
XRCC1-201ENST00000262887 ERGIC2Q96RQ1 377 aa16.58■□□□□ 0.25
XRCC1-201ENST00000262887 EPB41L5Q9HCM4 733 aa16.58■□□□□ 0.25
XRCC1-201ENST00000262887 CNTNAP5Q8WYK1 1306 aa16.58■□□□□ 0.24
XRCC1-201ENST00000262887 ESYT3A0FGR9 886 aa16.58■□□□□ 0.24
XRCC1-201ENST00000262887 BICDL2A1A5D9 508 aa16.58■□□□□ 0.24
XRCC1-201ENST00000262887 SMIM22K7EJ46 135 aa16.58■□□□□ 0.24
XRCC1-201ENST00000262887 SNAP23O00161 211 aa16.58■□□□□ 0.24
XRCC1-201ENST00000262887 GUCY2DQ02846 1103 aa16.58■□□□□ 0.24
XRCC1-201ENST00000262887 PPP4R3AQ6IN85 833 aa16.58■□□□□ 0.24
XRCC1-201ENST00000262887 P2RX5Q93086 422 aa16.58■□□□□ 0.24
XRCC1-201ENST00000262887 PLIN2Q99541 437 aa16.58■□□□□ 0.24
XRCC1-201ENST00000262887 PCDH11XQ9BZA7 1347 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms