RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 WARS2Q9UGM6 360 aaKnown RBP11.18□□□□□ -0.62
SLF2-201ENST00000238961 PACSIN2Q9UNF0 486 aaPredicted RBP11.18□□□□□ -0.62
SLF2-201ENST00000238961 ZNF148Q9UQR1 794 aa11.18□□□□□ -0.62
SLF2-201ENST00000238961 PCDHB13Q9Y5F0 798 aa11.18□□□□□ -0.62
SLF2-201ENST00000238961 RBM8AQ9Y5S9 174 aaKnown RBP11.18□□□□□ -0.62
SLF2-201ENST00000238961 EIF3CLB5ME19 914 aaKnown RBP11.18□□□□□ -0.62
SLF2-201ENST00000238961 TTI1O43156 1089 aa11.18□□□□□ -0.62
SLF2-201ENST00000238961 SLC1A4P43007 532 aa11.18□□□□□ -0.62
SLF2-201ENST00000238961 HDDC2Q7Z4H3 204 aa11.18□□□□□ -0.62
SLF2-201ENST00000238961 PRPF4O43172 522 aaKnown RBP eCLIP11.18□□□□□ -0.62
SLF2-201ENST00000238961 GUCA1CO95843 209 aa11.18□□□□□ -0.62
SLF2-201ENST00000238961 PCYT1AP49585 367 aa11.18□□□□□ -0.62
SLF2-201ENST00000238961 KRT28Q7Z3Y7 464 aa11.18□□□□□ -0.62
SLF2-201ENST00000238961 AP5M1Q9H0R1 490 aa11.18□□□□□ -0.62
SLF2-201ENST00000238961 A0A1B0GW55 424 aa11.18□□□□□ -0.62
SLF2-201ENST00000238961 PI4KAP2A4QPH2 592 aa11.18□□□□□ -0.62
SLF2-201ENST00000238961 DUX4L2P0CJ85 424 aa11.18□□□□□ -0.62
SLF2-201ENST00000238961 DUX4L3P0CJ86 424 aa11.18□□□□□ -0.62
SLF2-201ENST00000238961 DUX4L4P0CJ87 422 aa11.18□□□□□ -0.62
SLF2-201ENST00000238961 DUX4L5P0CJ88 424 aa11.18□□□□□ -0.62
SLF2-201ENST00000238961 DUX4L6P0CJ89 424 aa11.18□□□□□ -0.62
SLF2-201ENST00000238961 DUX4L7P0CJ90 424 aa11.18□□□□□ -0.62
SLF2-201ENST00000238961 KPNA2P52292 529 aaKnown RBP11.18□□□□□ -0.62
SLF2-201ENST00000238961 DNM1Q05193 864 aaKnown RBP11.18□□□□□ -0.62
SLF2-201ENST00000238961 MXD4Q14582 209 aaPredicted RBP11.18□□□□□ -0.62
SLF2-201ENST00000238961 CHRNA2Q15822 529 aa11.18□□□□□ -0.62
SLF2-201ENST00000238961 SMC5Q8IY18 1101 aa11.18□□□□□ -0.62
SLF2-201ENST00000238961 PI4KAP1Q8N8J0 262 aa11.18□□□□□ -0.62
SLF2-201ENST00000238961 PRDM5Q9NQX1 630 aaPredicted RBP11.18□□□□□ -0.62
SLF2-201ENST00000238961 C1orf112Q9NSG2 853 aa11.18□□□□□ -0.62
SLF2-201ENST00000238961 PAG1Q9NWQ8 432 aa11.18□□□□□ -0.62
SLF2-201ENST00000238961 DUX4Q9UBX2 424 aa11.18□□□□□ -0.62
SLF2-201ENST00000238961 KDRP35968 1356 aa11.18□□□□□ -0.62
SLF2-201ENST00000238961 HSPA1AP0DMV8 641 aaKnown RBP11.17□□□□□ -0.62
SLF2-201ENST00000238961 HSPA1BP0DMV9 641 aaKnown RBP11.17□□□□□ -0.62
SLF2-201ENST00000238961 ZFXP17010 805 aaPredicted RBP11.17□□□□□ -0.62
SLF2-201ENST00000238961 NCF2P19878 526 aaPredicted RBP11.17□□□□□ -0.62
SLF2-201ENST00000238961 PIK3CAP42336 1068 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 CALCRLQ16602 461 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 PTPROQ16827 1216 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 DPP9Q86TI2 863 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 FAM149B1Q96BN6 582 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 OTUB1Q96FW1 271 aaPredicted RBP11.17□□□□□ -0.62
SLF2-201ENST00000238961 STMN3Q9NZ72 180 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 TTF2Q9UNY4 1162 aaKnown RBP11.17□□□□□ -0.62
SLF2-201ENST00000238961 CAPN7Q9Y6W3 813 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 KRT4P19013 534 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 LRCH2Q5VUJ6 765 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 NOSTRINQ8IVI9 506 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 NIM1KQ8IY84 436 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 MED4Q9NPJ6 270 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 DLATP10515 647 aaKnown RBP11.17□□□□□ -0.62
SLF2-201ENST00000238961 HSPD1P10809 573 aaKnown RBP11.17□□□□□ -0.62
SLF2-201ENST00000238961 PDE6CP51160 858 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 PSMC1P62191 440 aaKnown RBP11.17□□□□□ -0.62
SLF2-201ENST00000238961 LBRQ14739 615 aaKnown RBP11.17□□□□□ -0.62
SLF2-201ENST00000238961 CDC37L1Q7L3B6 337 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 GLT8D2Q9H1C3 349 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 AKT3Q9Y243 479 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 TSPOAP1O95153 1857 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 RAD50Q92878 1312 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 XPOTO43592 962 aaKnown RBP11.17□□□□□ -0.62
SLF2-201ENST00000238961 CPP00450 1065 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 MCF2P10911 925 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 TTLL7Q6ZT98 887 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 MCF2L2Q86YR7 1114 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 HINFPQ9BQA5 517 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 CCDC90BQ9GZT6 254 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 AS3MTQ9HBK9 375 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 DOLKQ9UPQ8 538 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 CAB39Q9Y376 341 aaPredicted RBP11.17□□□□□ -0.62
SLF2-201ENST00000238961 SLC4A7Q9Y6M7 1214 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 FSCBQ5H9T9 825 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 PIDD1Q9HB75 910 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 CACNA2D2Q9NY47 1150 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 H0YIN7 160 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 RNF139Q8WU17 664 aa11.17□□□□□ -0.62
SLF2-201ENST00000238961 SYNRGQ9UMZ2 1314 aa11.16□□□□□ -0.62
SLF2-201ENST00000238961 TOM1L1O75674 476 aa11.16□□□□□ -0.62
SLF2-201ENST00000238961 TRAPPC3LQ5T215 181 aa11.16□□□□□ -0.62
SLF2-201ENST00000238961 KLC3Q6P597 504 aa11.16□□□□□ -0.62
SLF2-201ENST00000238961 SENP1Q9P0U3 644 aa11.16□□□□□ -0.62
SLF2-201ENST00000238961 PABPC4Q13310 644 aaKnown RBP eCLIP11.16□□□□□ -0.62
SLF2-201ENST00000238961 KCTD17Q8N5Z5 321 aa11.16□□□□□ -0.62
SLF2-201ENST00000238961 CACTINQ8WUQ7 758 aaKnown RBP11.16□□□□□ -0.62
SLF2-201ENST00000238961 USP6NLQ92738 828 aa11.16□□□□□ -0.62
SLF2-201ENST00000238961 TBC1D32Q96NH3 1257 aa11.16□□□□□ -0.62
SLF2-201ENST00000238961 DDX28Q9NUL7 540 aaKnown RBP11.16□□□□□ -0.62
SLF2-201ENST00000238961 TEX14Q8IWB6 1497 aa11.16□□□□□ -0.62
SLF2-201ENST00000238961 HFM1A2PYH4 1435 aa11.16□□□□□ -0.62
SLF2-201ENST00000238961 GAS7O60861 476 aa11.16□□□□□ -0.62
SLF2-201ENST00000238961 PDE6BP35913 854 aa11.16□□□□□ -0.62
SLF2-201ENST00000238961 PAK1Q13153 545 aa11.16□□□□□ -0.62
SLF2-201ENST00000238961 DRP2Q13474 957 aa11.16□□□□□ -0.62
SLF2-201ENST00000238961 DDB1Q16531 1140 aa11.16□□□□□ -0.62
SLF2-201ENST00000238961 TOM1O60784 492 aa11.16□□□□□ -0.62
SLF2-201ENST00000238961 FBXO41Q8TF61 875 aa11.16□□□□□ -0.62
SLF2-201ENST00000238961 UPF3AQ9H1J1 476 aaKnown RBP11.16□□□□□ -0.62
SLF2-201ENST00000238961 NDE1Q9NXR1 346 aa11.16□□□□□ -0.62
SLF2-201ENST00000238961 AATFQ9NY61 560 aaKnown RBP eCLIP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms