RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 POLR2FP61218 127 aaKnown RBP12.66□□□□□ -0.38
NOD1-201ENST00000222823 MAP7D1Q3KQU3 841 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 NBPF10Q6P3W6 841 aaKnown RBP12.66□□□□□ -0.38
NOD1-201ENST00000222823 SARM1Q6SZW1 724 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 H2AFVQ71UI9 128 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 ATG9AQ7Z3C6 839 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 NBPF15Q8N660 670 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 GJA10Q969M2 543 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 MLXIPQ9HAP2 919 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 KRT71Q3SY84 523 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 ASPRV1Q53RT3 343 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 KRT26Q7Z3Y9 468 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 MCF2L2Q86YR7 1114 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 CCDC117Q8IWD4 279 aaPredicted RBP12.66□□□□□ -0.38
NOD1-201ENST00000222823 PAGR1Q9BTK6 254 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 KIAA1024Q9UPX6 916 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 UBR1Q8IWV7 1749 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 FAM170AA1A519 330 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 LAD1O00515 517 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 LIFRP42702 1097 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 COPB1P53618 953 aaKnown RBP12.66□□□□□ -0.38
NOD1-201ENST00000222823 FAM182BQ5T319 152 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 CUEDC2Q9H467 287 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 MAGEF1Q9HAY2 307 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 TRPC5Q9UL62 973 aaPredicted RBP12.66□□□□□ -0.38
NOD1-201ENST00000222823 TCP1P17987 556 aaKnown RBP12.65□□□□□ -0.38
NOD1-201ENST00000222823 CCDC127Q96BQ5 260 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 TUBGCP2Q9BSJ2 902 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 TEKT3Q9BXF9 490 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 ST7Q9NRC1 585 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 PNMA2Q9UL42 364 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 HYOU1Q9Y4L1 999 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.65□□□□□ -0.38
NOD1-201ENST00000222823 KCNK3O14649 394 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 PSMC4P43686 418 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 BRD3Q15059 726 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 LONRF2Q1L5Z9 754 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 SLFNL1Q499Z3 407 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 TMC4Q7Z404 712 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 SPICE1Q8N0Z3 855 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 MAIP1Q8WWC4 291 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 ISCA1Q9BUE6 129 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 PLEKHA4Q9H4M7 779 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 SPTLC3Q9NUV7 552 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.65□□□□□ -0.38
NOD1-201ENST00000222823 SWAP70Q9UH65 585 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 PCDHA4Q9UN74 947 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 WDR19Q8NEZ3 1342 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 ABCC12Q96J65 1359 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.65□□□□□ -0.38
NOD1-201ENST00000222823 AKAP12Q02952 1782 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 K7ENM7 598 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 SH2B2O14492 632 aaPredicted RBP12.65□□□□□ -0.38
NOD1-201ENST00000222823 PRPF6O94906 941 aaKnown RBP12.65□□□□□ -0.38
NOD1-201ENST00000222823 SLFN14P0C7P3 912 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 RASGRF1Q13972 1273 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 STOX1Q6ZVD7 989 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 ILDR1Q86SU0 546 aaPredicted RBP12.65□□□□□ -0.38
NOD1-201ENST00000222823 ANKRD35Q8N283 1001 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 ANKRD13CQ8N6S4 541 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 LARP4BQ92615 738 aaKnown RBP12.65□□□□□ -0.38
NOD1-201ENST00000222823 CSRNP1Q96S65 589 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 RAB17Q9H0T7 212 aa12.65□□□□□ -0.38
NOD1-201ENST00000222823 PSDA5PKW4 1024 aaPredicted RBP12.64□□□□□ -0.39
NOD1-201ENST00000222823 IKBKBO14920 756 aa12.64□□□□□ -0.39
NOD1-201ENST00000222823 TTLL1O95922 423 aa12.64□□□□□ -0.39
NOD1-201ENST00000222823 LIG4P49917 911 aa12.64□□□□□ -0.39
NOD1-201ENST00000222823 EXOSC10Q01780 885 aaKnown RBP12.64□□□□□ -0.39
NOD1-201ENST00000222823 TRIM28Q13263 835 aaKnown RBP12.64□□□□□ -0.39
NOD1-201ENST00000222823 AK8Q96MA6 479 aa12.64□□□□□ -0.39
NOD1-201ENST00000222823 RABEP2Q9H5N1 569 aa12.64□□□□□ -0.39
NOD1-201ENST00000222823 SOS2Q07890 1332 aaPredicted RBP12.64□□□□□ -0.39
NOD1-201ENST00000222823 STK10O94804 968 aaKnown RBP12.64□□□□□ -0.39
NOD1-201ENST00000222823 MMP1P03956 469 aa12.64□□□□□ -0.39
NOD1-201ENST00000222823 MTMR3Q13615 1198 aa12.64□□□□□ -0.39
NOD1-201ENST00000222823 ODR4Q5SWX8 454 aa12.64□□□□□ -0.39
NOD1-201ENST00000222823 ARMCX5Q6P1M9 558 aa12.64□□□□□ -0.39
NOD1-201ENST00000222823 PPM1KQ8N3J5 372 aa12.64□□□□□ -0.39
NOD1-201ENST00000222823 QTRT2Q9H974 415 aaKnown RBP12.64□□□□□ -0.39
NOD1-201ENST00000222823 KANSL2Q9H9L4 492 aa12.64□□□□□ -0.39
NOD1-201ENST00000222823 CCPG1Q9ULG6 757 aa12.64□□□□□ -0.39
NOD1-201ENST00000222823 IFNB1P01574 187 aa12.64□□□□□ -0.39
NOD1-201ENST00000222823 GABPB1Q06547 395 aaPredicted RBP12.64□□□□□ -0.39
NOD1-201ENST00000222823 TAOK1Q7L7X3 1001 aa12.64□□□□□ -0.39
NOD1-201ENST00000222823 CABS1Q96KC9 395 aa12.64□□□□□ -0.39
NOD1-201ENST00000222823 RABGAP1Q9Y3P9 1069 aa12.64□□□□□ -0.39
NOD1-201ENST00000222823 N4BP1O75113 896 aaKnown RBP12.64□□□□□ -0.39
NOD1-201ENST00000222823 OAS2P29728 719 aaKnown RBP12.64□□□□□ -0.39
NOD1-201ENST00000222823 CASP14P31944 242 aa12.64□□□□□ -0.39
NOD1-201ENST00000222823 PPARDQ03181 441 aa12.64□□□□□ -0.39
NOD1-201ENST00000222823 PABPC4Q13310 644 aaKnown RBP eCLIP12.64□□□□□ -0.39
NOD1-201ENST00000222823 CC2D2BQ6DHV5 1058 aa12.64□□□□□ -0.39
NOD1-201ENST00000222823 ZBTB8OSQ8IWT0 167 aa12.64□□□□□ -0.39
NOD1-201ENST00000222823 SUGCTQ9HAC7 445 aa12.64□□□□□ -0.39
NOD1-201ENST00000222823 TRPC6Q9Y210 931 aa12.64□□□□□ -0.39
NOD1-201ENST00000222823 PPEF1O14829 653 aaPredicted RBP12.63□□□□□ -0.39
NOD1-201ENST00000222823 BUB1O43683 1085 aa12.63□□□□□ -0.39
NOD1-201ENST00000222823 KRT15P19012 456 aa12.63□□□□□ -0.39
NOD1-201ENST00000222823 YWHAEP62258 255 aaKnown RBP12.63□□□□□ -0.39
NOD1-201ENST00000222823 LACTBP83111 547 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms