RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W ECM27P47144 725 aa3.31□□□□□ -1.88
SIZ1YDR409W IMA1P53051 589 aa3.31□□□□□ -1.88
SIZ1YDR409W MRM2P53123 320 aa3.31□□□□□ -1.88
SIZ1YDR409W CLU1Q03690 1277 aaKnown RBP3.31□□□□□ -1.88
SIZ1YDR409W YDR444WQ04093 687 aa3.31□□□□□ -1.88
SIZ1YDR409W BUD22Q04347 519 aaKnown RBP3.31□□□□□ -1.88
SIZ1YDR409W MGR3Q04472 501 aa3.31□□□□□ -1.88
SIZ1YDR409W ATG26Q06321 1198 aa3.31□□□□□ -1.88
SIZ1YDR409W GGA1Q06336 557 aa3.31□□□□□ -1.88
SIZ1YDR409W MCM21Q06675 368 aa3.31□□□□□ -1.88
SIZ1YDR409W ASA1Q06822 443 aa3.31□□□□□ -1.88
SIZ1YDR409W NOP12Q08208 459 aaKnown RBP3.31□□□□□ -1.88
SIZ1YDR409W SVS1Q12254 260 aa3.31□□□□□ -1.88
SIZ1YDR409W RIF1P29539 1916 aa3.31□□□□□ -1.88
SIZ1YDR409W ILV1P00927 576 aaKnown RBP3.3□□□□□ -1.88
SIZ1YDR409W RPS3P05750 240 aaKnown RBP3.3□□□□□ -1.88
SIZ1YDR409W GCN3P14741 305 aa3.3□□□□□ -1.88
SIZ1YDR409W UBA1P22515 1024 aaKnown RBP3.3□□□□□ -1.88
SIZ1YDR409W YCK2P23292 546 aaKnown RBP3.3□□□□□ -1.88
SIZ1YDR409W NGG1P32494 702 aa3.3□□□□□ -1.88
SIZ1YDR409W TGL1P34163 548 aa3.3□□□□□ -1.88
SIZ1YDR409W STB6P36085 766 aa3.3□□□□□ -1.88
SIZ1YDR409W KAP104P38217 918 aaKnown RBP3.3□□□□□ -1.88
SIZ1YDR409W PCA1P38360 1216 aa3.3□□□□□ -1.88
SIZ1YDR409W CHS6P40955 746 aa3.3□□□□□ -1.88
SIZ1YDR409W PHO86P46956 311 aa3.3□□□□□ -1.88
SIZ1YDR409W EMC2P47133 292 aaKnown RBP3.3□□□□□ -1.88
SIZ1YDR409W MNP1P53163 194 aaPredicted RBP3.3□□□□□ -1.88
SIZ1YDR409W ARK1P53974 638 aa3.3□□□□□ -1.88
SIZ1YDR409W SWP1Q02795 286 aa3.3□□□□□ -1.88
SIZ1YDR409W TVP15Q03860 143 aa3.3□□□□□ -1.88
SIZ1YDR409W ADE13Q05911 482 aaKnown RBP3.3□□□□□ -1.88
SIZ1YDR409W FMP45Q07651 309 aa3.3□□□□□ -1.88
SIZ1YDR409W RCL1Q08096 367 aaPredicted RBP3.3□□□□□ -1.88
SIZ1YDR409W SMC5Q08204 1093 aa3.3□□□□□ -1.88
SIZ1YDR409W UAF30Q08747 228 aa3.3□□□□□ -1.88
SIZ1YDR409W MCH5Q08777 521 aa3.3□□□□□ -1.88
SIZ1YDR409W ICL2Q12031 575 aa3.3□□□□□ -1.88
SIZ1YDR409W AVL9Q12500 764 aa3.3□□□□□ -1.88
SIZ1YDR409W ARG81P05085 880 aa3.3□□□□□ -1.88
SIZ1YDR409W CHS2P14180 963 aa3.3□□□□□ -1.88
SIZ1YDR409W URE2P23202 354 aaKnown RBP3.3□□□□□ -1.88
SIZ1YDR409W PRP22P24384 1145 aaKnown RBP3.3□□□□□ -1.88
SIZ1YDR409W ERV1P27882 189 aa3.3□□□□□ -1.88
SIZ1YDR409W SLC1P33333 303 aa3.3□□□□□ -1.88
SIZ1YDR409W YBR139WP38109 508 aa3.3□□□□□ -1.88
SIZ1YDR409W PFF1P38244 976 aa3.3□□□□□ -1.88
SIZ1YDR409W SRP68P38687 599 aaKnown RBP3.3□□□□□ -1.88
SIZ1YDR409W SSP120P39931 234 aaKnown RBP3.3□□□□□ -1.88
SIZ1YDR409W AST2P39945 430 aaKnown RBP3.3□□□□□ -1.88
SIZ1YDR409W ULP2P40537 1034 aaPredicted RBP3.3□□□□□ -1.88
SIZ1YDR409W YJR054WP47114 497 aa3.3□□□□□ -1.88
SIZ1YDR409W CLA4P48562 842 aa3.3□□□□□ -1.88
SIZ1YDR409W ORC5P50874 479 aa3.3□□□□□ -1.88
SIZ1YDR409W ALT1P52893 592 aa3.3□□□□□ -1.88
SIZ1YDR409W PUS2P53167 370 aa3.3□□□□□ -1.88
SIZ1YDR409W COG2P53271 262 aa3.3□□□□□ -1.88
SIZ1YDR409W VPS9P54787 451 aa3.3□□□□□ -1.88
SIZ1YDR409W ACS1Q01574 713 aa3.3□□□□□ -1.88
SIZ1YDR409W SED5Q01590 340 aa3.3□□□□□ -1.88
SIZ1YDR409W NGL2Q03264 515 aaKnown RBP3.3□□□□□ -1.88
SIZ1YDR409W YML108WQ03759 105 aa3.3□□□□□ -1.88
SIZ1YDR409W YHM2Q04013 314 aa3.3□□□□□ -1.88
SIZ1YDR409W AIM32Q04689 311 aa3.3□□□□□ -1.88
SIZ1YDR409W PRM6Q04705 352 aa3.3□□□□□ -1.88
SIZ1YDR409W RBS1Q05672 457 aaKnown RBP3.3□□□□□ -1.88
SIZ1YDR409W DUS3Q06053 668 aaKnown RBP3.3□□□□□ -1.88
SIZ1YDR409W YET3Q07451 203 aa3.3□□□□□ -1.88
SIZ1YDR409W BUD7Q08754 746 aa3.3□□□□□ -1.88
SIZ1YDR409W YDR018CQ12185 396 aa3.3□□□□□ -1.88
SIZ1YDR409W NTO1Q12311 748 aa3.3□□□□□ -1.88
SIZ1YDR409W HRT3Q12347 344 aa3.3□□□□□ -1.88
SIZ1YDR409W KCS1Q12494 1050 aa3.3□□□□□ -1.88
SIZ1YDR409W HTZ1Q12692 134 aaKnown RBP3.3□□□□□ -1.88
SIZ1YDR409W TUB2P02557 457 aaKnown RBP3.29□□□□□ -1.88
SIZ1YDR409W BI2P03873 423 aa3.29□□□□□ -1.88
SIZ1YDR409W COR1P07256 457 aa3.29□□□□□ -1.88
SIZ1YDR409W CDC24P11433 854 aaPredicted RBP3.29□□□□□ -1.88
SIZ1YDR409W PRE8P23639 250 aa3.29□□□□□ -1.88
SIZ1YDR409W CDC20P26309 610 aa3.29□□□□□ -1.88
SIZ1YDR409W SPR1P32603 445 aa3.29□□□□□ -1.88
SIZ1YDR409W NTR2P36118 322 aaPredicted RBP3.29□□□□□ -1.88
SIZ1YDR409W RIM2P38127 377 aa3.29□□□□□ -1.88
SIZ1YDR409W YBR285WP38354 144 aa3.29□□□□□ -1.88
SIZ1YDR409W SUL1P38359 859 aa3.29□□□□□ -1.88
SIZ1YDR409W YHR097CP38809 366 aaKnown RBP3.29□□□□□ -1.88
SIZ1YDR409W FIR1P40020 876 aa3.29□□□□□ -1.88
SIZ1YDR409W ARG2P40360 574 aa3.29□□□□□ -1.88
SIZ1YDR409W BST1P43571 1029 aa3.29□□□□□ -1.88
SIZ1YDR409W BIR1P47134 954 aa3.29□□□□□ -1.88
SIZ1YDR409W ARH1P48360 493 aa3.29□□□□□ -1.88
SIZ1YDR409W TRF5P48561 642 aaKnown RBP3.29□□□□□ -1.88
SIZ1YDR409W RCF2P53721 224 aa3.29□□□□□ -1.88
SIZ1YDR409W NOG2P53742 486 aaKnown RBP3.29□□□□□ -1.88
SIZ1YDR409W PDR16P53860 351 aaKnown RBP3.29□□□□□ -1.88
SIZ1YDR409W ORC4P54791 529 aa3.29□□□□□ -1.88
SIZ1YDR409W RGC1Q06108 1083 aaKnown RBP3.29□□□□□ -1.88
SIZ1YDR409W SUE1Q06524 206 aa3.29□□□□□ -1.88
SIZ1YDR409W IWR1Q07532 353 aaPredicted RBP3.29□□□□□ -1.88
SIZ1YDR409W ENT4Q07872 247 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms