RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 COA7Q96BR5 231 aa14.88□□□□□ -0.03
PHGDH-220ENST00000641570 PTPN18Q99952 460 aa14.88□□□□□ -0.03
PHGDH-220ENST00000641570 PSTPIP2Q9H939 334 aa14.88□□□□□ -0.03
PHGDH-220ENST00000641570 RNF146Q9NTX7 359 aa14.88□□□□□ -0.03
PHGDH-220ENST00000641570 VPS54Q9P1Q0 977 aa14.88□□□□□ -0.03
PHGDH-220ENST00000641570 SMCO2A6NFE2 343 aa14.87□□□□□ -0.03
PHGDH-220ENST00000641570 KRT2P35908 639 aa14.87□□□□□ -0.03
PHGDH-220ENST00000641570 FUT2Q10981 343 aa14.87□□□□□ -0.03
PHGDH-220ENST00000641570 ST3GAL1Q11201 340 aa14.87□□□□□ -0.03
PHGDH-220ENST00000641570 KCTD2Q14681 263 aa14.87□□□□□ -0.03
PHGDH-220ENST00000641570 TMEM132BQ14DG7 1078 aa14.87□□□□□ -0.03
PHGDH-220ENST00000641570 MCTP2Q6DN12 878 aa14.87□□□□□ -0.03
PHGDH-220ENST00000641570 NSMFQ6X4W1 530 aa14.87□□□□□ -0.03
PHGDH-220ENST00000641570 MTMR8Q96EF0 704 aa14.87□□□□□ -0.03
PHGDH-220ENST00000641570 AGBL1Q96MI9 1066 aa14.87□□□□□ -0.03
PHGDH-220ENST00000641570 MROH8Q9H579 483 aa14.87□□□□□ -0.03
PHGDH-220ENST00000641570 SLC5A4Q9NY91 659 aa14.87□□□□□ -0.03
PHGDH-220ENST00000641570 CPA4Q9UI42 421 aa14.87□□□□□ -0.03
PHGDH-220ENST00000641570 SPDYE3A6NKU9 549 aa14.86□□□□□ -0.03
PHGDH-220ENST00000641570 B4DLN1 442 aa14.86□□□□□ -0.03
PHGDH-220ENST00000641570 GCOM1H8Y6P7 765 aaPredicted RBP14.86□□□□□ -0.03
PHGDH-220ENST00000641570 STXBP3O00186 592 aa14.86□□□□□ -0.03
PHGDH-220ENST00000641570 ATP2A1O14983 1001 aa14.86□□□□□ -0.03
PHGDH-220ENST00000641570 TLR2O60603 784 aa14.86□□□□□ -0.03
PHGDH-220ENST00000641570 CFBP00751 764 aa14.86□□□□□ -0.03
PHGDH-220ENST00000641570 POLR2MP0CAP2 368 aa14.86□□□□□ -0.03
PHGDH-220ENST00000641570 MAPK4P31152 587 aa14.86□□□□□ -0.03
PHGDH-220ENST00000641570 GUCY1B3Q02153 619 aa14.86□□□□□ -0.03
PHGDH-220ENST00000641570 CRHR2Q13324 411 aa14.86□□□□□ -0.03
PHGDH-220ENST00000641570 RIOX2Q8IUF8 465 aa14.86□□□□□ -0.03
PHGDH-220ENST00000641570 PFASO15067 1338 aa14.86□□□□□ -0.03
PHGDH-220ENST00000641570 CCDC194A0A1B0GVG4 234 aa14.85□□□□□ -0.03
PHGDH-220ENST00000641570 STX6O43752 255 aa14.85□□□□□ -0.03
PHGDH-220ENST00000641570 TRPA1O75762 1119 aa14.85□□□□□ -0.03
PHGDH-220ENST00000641570 NUCB2P80303 420 aa14.85□□□□□ -0.03
PHGDH-220ENST00000641570 KRT40Q6A162 431 aa14.85□□□□□ -0.03
PHGDH-220ENST00000641570 TEX2Q8IWB9 1127 aa14.85□□□□□ -0.03
PHGDH-220ENST00000641570 REXO1Q8N1G1 1221 aaKnown RBP14.85□□□□□ -0.03
PHGDH-220ENST00000641570 SHCBP1Q8NEM2 672 aa14.85□□□□□ -0.03
PHGDH-220ENST00000641570 MMP19Q99542 508 aa14.85□□□□□ -0.03
PHGDH-220ENST00000641570 SAGE1Q9NXZ1 904 aa14.85□□□□□ -0.03
PHGDH-220ENST00000641570 PCDHA4Q9UN74 947 aa14.85□□□□□ -0.03
PHGDH-220ENST00000641570 ADAMTS5Q9UNA0 930 aa14.85□□□□□ -0.03
PHGDH-220ENST00000641570 ATP6V1DQ9Y5K8 247 aa14.85□□□□□ -0.03
PHGDH-220ENST00000641570 ESYT2A0FGR8 921 aa14.84□□□□□ -0.03
PHGDH-220ENST00000641570 FCER1AP12319 257 aa14.84□□□□□ -0.03
PHGDH-220ENST00000641570 ERCC3P19447 782 aa14.84□□□□□ -0.03
PHGDH-220ENST00000641570 FCGRTP55899 365 aa14.84□□□□□ -0.03
PHGDH-220ENST00000641570 PKN1Q16512 942 aa14.84□□□□□ -0.03
PHGDH-220ENST00000641570 RNF207Q6ZRF8 634 aa14.84□□□□□ -0.03
PHGDH-220ENST00000641570 SAMD3Q8N6K7 520 aa14.84□□□□□ -0.03
PHGDH-220ENST00000641570 ZIC5Q96T25 663 aa14.84□□□□□ -0.03
PHGDH-220ENST00000641570 MOV10L1Q9BXT6 1211 aaKnown RBP14.84□□□□□ -0.03
PHGDH-220ENST00000641570 BTBD7Q9P203 1132 aa14.84□□□□□ -0.03
PHGDH-220ENST00000641570 MORF4L1Q9UBU8 362 aa14.84□□□□□ -0.03
PHGDH-220ENST00000641570 ZNF214Q9UL59 606 aaPredicted RBP14.84□□□□□ -0.03
PHGDH-220ENST00000641570 NOL7Q9UMY1 257 aaKnown RBP14.84□□□□□ -0.03
PHGDH-220ENST00000641570 KCNJ14Q9UNX9 436 aa14.84□□□□□ -0.03
PHGDH-220ENST00000641570 TNPO2O14787 897 aaKnown RBP14.83□□□□□ -0.04
PHGDH-220ENST00000641570 DTNBO60941 627 aa14.83□□□□□ -0.04
PHGDH-220ENST00000641570 FOSP01100 380 aaPredicted RBP14.83□□□□□ -0.04
PHGDH-220ENST00000641570 MMP1P03956 469 aa14.83□□□□□ -0.04
PHGDH-220ENST00000641570 FDPSP14324 419 aaKnown RBP14.83□□□□□ -0.04
PHGDH-220ENST00000641570 KRT25Q7Z3Z0 450 aa14.83□□□□□ -0.04
PHGDH-220ENST00000641570 DIS3L2Q8IYB7 885 aaKnown RBP14.83□□□□□ -0.04
PHGDH-220ENST00000641570 BLIDQ8IZY5 108 aa14.83□□□□□ -0.04
PHGDH-220ENST00000641570 RGS22Q8NE09 1264 aa14.83□□□□□ -0.04
PHGDH-220ENST00000641570 FBXO18Q8NFZ0 1043 aa14.83□□□□□ -0.04
PHGDH-220ENST00000641570 AIFM3Q96NN9 605 aa14.83□□□□□ -0.04
PHGDH-220ENST00000641570 MAF1Q9H063 256 aa14.83□□□□□ -0.04
PHGDH-220ENST00000641570 RIC8AQ9NPQ8 531 aa14.83□□□□□ -0.04
PHGDH-220ENST00000641570 RNF186Q9NXI6 227 aa14.83□□□□□ -0.04
PHGDH-220ENST00000641570 MAP3K20Q9NYL2 800 aaKnown RBP14.83□□□□□ -0.04
PHGDH-220ENST00000641570 RBPJLQ9UBG7 517 aa14.83□□□□□ -0.04
PHGDH-220ENST00000641570 CIZ1Q9ULV3 898 aaPredicted RBP14.83□□□□□ -0.04
PHGDH-220ENST00000641570 PTPRFP10586 1907 aa14.82□□□□□ -0.04
PHGDH-220ENST00000641570 ECM2O94769 699 aaPredicted RBP14.82□□□□□ -0.04
PHGDH-220ENST00000641570 TBC1D8O95759 1140 aa14.82□□□□□ -0.04
PHGDH-220ENST00000641570 SYT1P21579 422 aa14.82□□□□□ -0.04
PHGDH-220ENST00000641570 HOXD10P28358 340 aa14.82□□□□□ -0.04
PHGDH-220ENST00000641570 AP3B2Q13367 1082 aa14.82□□□□□ -0.04
PHGDH-220ENST00000641570 SLC35G1Q2M3R5 365 aa14.82□□□□□ -0.04
PHGDH-220ENST00000641570 PLEKHH3Q7Z736 793 aa14.82□□□□□ -0.04
PHGDH-220ENST00000641570 FCHSD1Q86WN1 690 aa14.82□□□□□ -0.04
PHGDH-220ENST00000641570 REPS2Q8NFH8 660 aa14.82□□□□□ -0.04
PHGDH-220ENST00000641570 PHF20Q9BVI0 1012 aa14.82□□□□□ -0.04
PHGDH-220ENST00000641570 ZMYND12Q9H0C1 365 aa14.82□□□□□ -0.04
PHGDH-220ENST00000641570 ADD3Q9UEY8 706 aaKnown RBP14.82□□□□□ -0.04
PHGDH-220ENST00000641570 ZNF536O15090 1300 aa14.82□□□□□ -0.04
PHGDH-220ENST00000641570 POTEB2H3BUK9 544 aa14.81□□□□□ -0.04
PHGDH-220ENST00000641570 STRNO43815 780 aa14.81□□□□□ -0.04
PHGDH-220ENST00000641570 PPP1R11O60927 126 aaPredicted RBP14.81□□□□□ -0.04
PHGDH-220ENST00000641570 CNMDO75829 334 aa14.81□□□□□ -0.04
PHGDH-220ENST00000641570 SP3Q02447 781 aa14.81□□□□□ -0.04
PHGDH-220ENST00000641570 FOXD4L5Q5VV16 416 aaPredicted RBP14.81□□□□□ -0.04
PHGDH-220ENST00000641570 ARHGEF16Q5VV41 709 aa14.81□□□□□ -0.04
PHGDH-220ENST00000641570 BRAPQ7Z569 592 aa14.81□□□□□ -0.04
PHGDH-220ENST00000641570 DPP9Q86TI2 863 aa14.81□□□□□ -0.04
PHGDH-220ENST00000641570 DAGLBQ8NCG7 672 aa14.81□□□□□ -0.04
PHGDH-220ENST00000641570 SOCS4Q8WXH5 440 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms