RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 C16orf86Q6ZW13 317 aa11.69□□□□□ -0.54
PHGDH-212ENST00000641247 NOL8Q76FK4 1167 aaKnown RBP11.69□□□□□ -0.54
PHGDH-212ENST00000641247 TLK2Q86UE8 772 aa11.69□□□□□ -0.54
PHGDH-212ENST00000641247 FAM133AQ8N9E0 248 aa11.69□□□□□ -0.54
PHGDH-212ENST00000641247 PHOSPHO2Q8TCD6 241 aa11.69□□□□□ -0.54
PHGDH-212ENST00000641247 GDPD5Q8WTR4 605 aa11.69□□□□□ -0.54
PHGDH-212ENST00000641247 PURBQ96QR8 312 aaKnown RBP11.69□□□□□ -0.54
PHGDH-212ENST00000641247 UBE2ZQ9H832 354 aaPredicted RBP11.69□□□□□ -0.54
PHGDH-212ENST00000641247 SUGCTQ9HAC7 445 aa11.69□□□□□ -0.54
PHGDH-212ENST00000641247 COL11A1P12107 1806 aaPredicted RBP11.69□□□□□ -0.54
PHGDH-212ENST00000641247 POTEB3A0JP26 581 aa11.68□□□□□ -0.54
PHGDH-212ENST00000641247 NDUFB10O96000 172 aa11.68□□□□□ -0.54
PHGDH-212ENST00000641247 IQCF3P0C7M6 154 aa11.68□□□□□ -0.54
PHGDH-212ENST00000641247 TCTN1Q2MV58 587 aa11.68□□□□□ -0.54
PHGDH-212ENST00000641247 LEXMQ3ZCV2 418 aa11.68□□□□□ -0.54
PHGDH-212ENST00000641247 POTEBQ6S5H4 581 aa11.68□□□□□ -0.54
PHGDH-212ENST00000641247 EEPD1Q7L9B9 569 aa11.68□□□□□ -0.54
PHGDH-212ENST00000641247 TMEM57Q8N5G2 664 aa11.68□□□□□ -0.54
PHGDH-212ENST00000641247 KIFC2Q96AC6 838 aa11.68□□□□□ -0.54
PHGDH-212ENST00000641247 SLC9A7Q96T83 725 aa11.68□□□□□ -0.54
PHGDH-212ENST00000641247 SLC38A10Q9HBR0 1119 aa11.68□□□□□ -0.54
PHGDH-212ENST00000641247 GOPCQ9HD26 462 aa11.68□□□□□ -0.54
PHGDH-212ENST00000641247 MBD4O95243 580 aa11.67□□□□□ -0.54
PHGDH-212ENST00000641247 CT47B1P0C2W7 299 aaPredicted RBP11.67□□□□□ -0.54
PHGDH-212ENST00000641247 CTR9Q6PD62 1173 aa11.67□□□□□ -0.54
PHGDH-212ENST00000641247 PRPF38AQ8NAV1 312 aaKnown RBP11.67□□□□□ -0.54
PHGDH-212ENST00000641247 HOMER2Q9NSB8 354 aa11.67□□□□□ -0.54
PHGDH-212ENST00000641247 ZNF536O15090 1300 aa11.66□□□□□ -0.54
PHGDH-212ENST00000641247 TNKSO95271 1327 aa11.66□□□□□ -0.54
PHGDH-212ENST00000641247 GRXCR2A6NFK2 248 aa11.66□□□□□ -0.54
PHGDH-212ENST00000641247 GOLIM4O00461 696 aa11.66□□□□□ -0.54
PHGDH-212ENST00000641247 ZBED4O75132 1171 aa11.66□□□□□ -0.54
PHGDH-212ENST00000641247 PFKMP08237 780 aa11.66□□□□□ -0.54
PHGDH-212ENST00000641247 KCNA5P22460 613 aa11.66□□□□□ -0.54
PHGDH-212ENST00000641247 TMED8Q6PL24 325 aaPredicted RBP11.66□□□□□ -0.54
PHGDH-212ENST00000641247 AACSQ86V21 672 aa11.66□□□□□ -0.54
PHGDH-212ENST00000641247 FBXO16Q8IX29 292 aaPredicted RBP11.66□□□□□ -0.54
PHGDH-212ENST00000641247 STK11IPQ8N1F8 1099 aa11.66□□□□□ -0.54
PHGDH-212ENST00000641247 CHST13Q8NET6 341 aa11.66□□□□□ -0.54
PHGDH-212ENST00000641247 AP5M1Q9H0R1 490 aa11.66□□□□□ -0.54
PHGDH-212ENST00000641247 A1CFQ9NQ94 594 aaKnown RBP11.66□□□□□ -0.54
PHGDH-212ENST00000641247 RCAN3Q9UKA8 241 aa11.66□□□□□ -0.54
PHGDH-212ENST00000641247 MTUS1Q9ULD2 1270 aa11.66□□□□□ -0.54
PHGDH-212ENST00000641247 ALADP13716 330 aa11.65□□□□□ -0.54
PHGDH-212ENST00000641247 PRKCSHP14314 528 aaPredicted RBP11.65□□□□□ -0.54
PHGDH-212ENST00000641247 SSTR3P32745 418 aaPredicted RBP11.65□□□□□ -0.54
PHGDH-212ENST00000641247 DEFB103AP81534 67 aa11.65□□□□□ -0.54
PHGDH-212ENST00000641247 PURAQ00577 322 aaKnown RBP11.65□□□□□ -0.54
PHGDH-212ENST00000641247 PTCRAQ6ISU1 281 aaPredicted RBP11.65□□□□□ -0.54
PHGDH-212ENST00000641247 HFE2Q6ZVN8 426 aa11.65□□□□□ -0.54
PHGDH-212ENST00000641247 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.65□□□□□ -0.54
PHGDH-212ENST00000641247 FRAT1Q92837 279 aaPredicted RBP11.65□□□□□ -0.54
PHGDH-212ENST00000641247 IL1RAPL2Q9NP60 686 aa11.65□□□□□ -0.54
PHGDH-212ENST00000641247 ATP8A2Q9NTI2 1148 aa11.65□□□□□ -0.54
PHGDH-212ENST00000641247 LMCD1Q9NZU5 365 aa11.65□□□□□ -0.54
PHGDH-212ENST00000641247 NYAP2Q9P242 653 aa11.65□□□□□ -0.54
PHGDH-212ENST00000641247 EXOC6BQ9Y2D4 811 aa11.65□□□□□ -0.54
PHGDH-212ENST00000641247 Q9Y3F1 56 aa11.65□□□□□ -0.54
PHGDH-212ENST00000641247 NAV1Q8NEY1 1877 aa11.64□□□□□ -0.55
PHGDH-212ENST00000641247 IGKV6D-41A0A0C4DH26 115 aa11.64□□□□□ -0.55
PHGDH-212ENST00000641247 KIF28PB7ZC32 967 aa11.64□□□□□ -0.55
PHGDH-212ENST00000641247 ACTN1P12814 892 aa11.64□□□□□ -0.55
PHGDH-212ENST00000641247 RASA1P20936 1047 aa11.64□□□□□ -0.55
PHGDH-212ENST00000641247 ADD2P35612 726 aa11.64□□□□□ -0.55
PHGDH-212ENST00000641247 TTF1Q15361 905 aaPredicted RBP11.64□□□□□ -0.55
PHGDH-212ENST00000641247 NBPF20Q3BBV1 942 aa11.64□□□□□ -0.55
PHGDH-212ENST00000641247 IQSEC1Q6DN90 963 aa11.64□□□□□ -0.55
PHGDH-212ENST00000641247 KIAA1211Q6ZU35 1233 aa11.64□□□□□ -0.55
PHGDH-212ENST00000641247 NEK9Q8TD19 979 aa11.64□□□□□ -0.55
PHGDH-212ENST00000641247 CTAGE1Q96RT6 745 aa11.64□□□□□ -0.55
PHGDH-212ENST00000641247 DNAJC2Q99543 621 aaKnown RBP11.64□□□□□ -0.55
PHGDH-212ENST00000641247 SEZ6LQ9BYH1 1024 aa11.64□□□□□ -0.55
PHGDH-212ENST00000641247 FTOQ9C0B1 505 aaKnown RBP eCLIP11.64□□□□□ -0.55
PHGDH-212ENST00000641247 CLIP2Q9UDT6 1046 aa11.64□□□□□ -0.55
PHGDH-212ENST00000641247 LINC01553A4QN01 128 aa11.63□□□□□ -0.55
PHGDH-212ENST00000641247 H3BQ06 376 aaPredicted RBP11.63□□□□□ -0.55
PHGDH-212ENST00000641247 DCXO43602 365 aa11.63□□□□□ -0.55
PHGDH-212ENST00000641247 ZEB2O60315 1214 aa11.63□□□□□ -0.55
PHGDH-212ENST00000641247 MYL3P08590 195 aa11.63□□□□□ -0.55
PHGDH-212ENST00000641247 SUPT20HL2P0C7V6 817 aa11.63□□□□□ -0.55
PHGDH-212ENST00000641247 SNAP25P60880 206 aa11.63□□□□□ -0.55
PHGDH-212ENST00000641247 ERVK-21P61565 698 aa11.63□□□□□ -0.55
PHGDH-212ENST00000641247 WDR5P61964 334 aaKnown RBP11.63□□□□□ -0.55
PHGDH-212ENST00000641247 CSPP1Q1MSJ5 1256 aa11.63□□□□□ -0.55
PHGDH-212ENST00000641247 MUM1L1Q5H9M0 696 aa11.63□□□□□ -0.55
PHGDH-212ENST00000641247 IER5LQ5T953 404 aa11.63□□□□□ -0.55
PHGDH-212ENST00000641247 PRSS33Q8NF86 280 aa11.63□□□□□ -0.55
PHGDH-212ENST00000641247 CHMP4CQ96CF2 233 aa11.63□□□□□ -0.55
PHGDH-212ENST00000641247 PUS7LQ9H0K6 701 aaKnown RBP11.63□□□□□ -0.55
PHGDH-212ENST00000641247 FBXO40Q9UH90 709 aa11.63□□□□□ -0.55
PHGDH-212ENST00000641247 C19orf67A6NJJ6 358 aa11.62□□□□□ -0.55
PHGDH-212ENST00000641247 ASB14A6NK59 587 aa11.62□□□□□ -0.55
PHGDH-212ENST00000641247 RFC2P35250 354 aa11.62□□□□□ -0.55
PHGDH-212ENST00000641247 OAZ1P54368 228 aa11.62□□□□□ -0.55
PHGDH-212ENST00000641247 DUSP28Q4G0W2 176 aa11.62□□□□□ -0.55
PHGDH-212ENST00000641247 LRRC47Q8N1G4 583 aaKnown RBP11.62□□□□□ -0.55
PHGDH-212ENST00000641247 MORC4Q8TE76 937 aa11.62□□□□□ -0.55
PHGDH-212ENST00000641247 MKL1Q969V6 931 aa11.62□□□□□ -0.55
PHGDH-212ENST00000641247 ACAD9Q9H845 621 aa11.62□□□□□ -0.55
PHGDH-212ENST00000641247 RNF146Q9NTX7 359 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms