RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 U2AF1L5P0DN76 240 aaPredicted RBP3.18□□□□□ -1.9
HMHB1-202ENST00000638299 RBP3P10745 1247 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 RHCEP18577 417 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 ECI1P42126 302 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 KCNJ6P48051 423 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 AK2P54819 239 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 GFRA1P56159 465 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 SCAND1P57086 179 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 GJA9P57773 515 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 U2AF1Q01081 240 aaKnown RBP eCLIP3.18□□□□□ -1.9
HMHB1-202ENST00000638299 RHDQ02161 417 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 BIRC3Q13489 604 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 IKBKEQ14164 716 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 LRRC32Q14392 662 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 CCDC93Q567U6 631 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 PPM1JQ5JR12 505 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 EFHC2Q5JST6 749 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 IFIT1BQ5T764 474 aaKnown RBP3.18□□□□□ -1.9
HMHB1-202ENST00000638299 LDHAL6AQ6ZMR3 332 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 USP53Q70EK8 1073 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 CHST15Q7LFX5 561 aaPredicted RBP3.18□□□□□ -1.9
HMHB1-202ENST00000638299 UBE3DQ7Z6J8 389 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 FCHSD1Q86WN1 690 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 SLC41A1Q8IVJ1 513 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 CCDC144CPQ8IYA2 1237 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 IGSF22Q8N9C0 903 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 TMEM145Q8NBT3 493 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 ZBTB34Q8NCN2 500 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 FAM156AQ8NDB6 213 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.18□□□□□ -1.9
HMHB1-202ENST00000638299 PPP1R35Q8TAP8 253 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 DIO2Q92813 273 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 TTC17Q96AE7 1141 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 ABHD17AQ96GS6 310 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 C1orf159Q96HA4 380 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 AIFM3Q96NN9 605 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 TBCBQ99426 244 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 ORAI3Q9BRQ5 295 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 CENPOQ9BU64 300 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 CRB3Q9BUF7 120 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 APOL5Q9BWW9 433 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 MARK1Q9P0L2 795 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 HDAC9Q9UKV0 1011 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 TPX2Q9ULW0 747 aaKnown RBP3.18□□□□□ -1.9
HMHB1-202ENST00000638299 COQ6Q9Y2Z9 468 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 EMC9Q9Y3B6 208 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 DYRK1BQ9Y463 629 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 PCDHGB6Q9Y5F9 930 aa3.18□□□□□ -1.9
HMHB1-202ENST00000638299 TTLL8A6PVC2 850 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 SHOXO15266 292 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 TGM5O43548 720 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 SNX2O60749 519 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 PQBP1O60828 265 aaKnown RBP3.17□□□□□ -1.9
HMHB1-202ENST00000638299 VAMP4O75379 141 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 CKMP06732 381 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 SNRPB2P08579 225 aaKnown RBP3.17□□□□□ -1.9
HMHB1-202ENST00000638299 SRGAP2CP0DJJ0 459 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 NAT2P11245 290 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 ZKSCAN1P17029 563 aaPredicted RBP3.17□□□□□ -1.9
HMHB1-202ENST00000638299 HSPA6P17066 643 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 PTPRAP18433 802 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 CD247P20963 164 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 RXRBP28702 533 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 GBP1P32455 592 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 CHKAP35790 457 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 LSSP48449 732 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 ETF1P62495 437 aaKnown RBP3.17□□□□□ -1.9
HMHB1-202ENST00000638299 GUCY1A3Q02108 690 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 PDE4BQ07343 736 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 AP3B2Q13367 1082 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 PPP2R5DQ14738 602 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 KRT72Q14CN4 511 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 SART3Q15020 963 aaKnown RBP3.17□□□□□ -1.9
HMHB1-202ENST00000638299 ELF2Q15723 593 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 NKG7Q16617 165 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 BBS9Q3SYG4 887 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 RRP12Q5JTH9 1297 aaKnown RBP3.17□□□□□ -1.9
HMHB1-202ENST00000638299 SLC35F1Q5T1Q4 408 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 ICE2Q659A1 982 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 CREB3L3Q68CJ9 461 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 SCARA3Q6AZY7 606 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 GTF2IRD2BQ6EKJ0 949 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 SYDE1Q6ZW31 735 aaPredicted RBP3.17□□□□□ -1.9
HMHB1-202ENST00000638299 CATIPQ7Z7H3 387 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 GTF2IRD2Q86UP8 949 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 COL23A1Q86Y22 540 aaPredicted RBP3.17□□□□□ -1.9
HMHB1-202ENST00000638299 MCATQ8IVS2 390 aaKnown RBP3.17□□□□□ -1.9
HMHB1-202ENST00000638299 CCDC89Q8N998 374 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 PPHLN1Q8NEY8 458 aaKnown RBP3.17□□□□□ -1.9
HMHB1-202ENST00000638299 KCTD13Q8WZ19 329 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 SKA1Q96BD8 255 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 TMEM87BQ96K49 555 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 SGCZQ96LD1 299 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 DHRS1Q96LJ7 313 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 TEKT5Q96M29 485 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 ACO2Q99798 780 aaKnown RBP3.17□□□□□ -1.9
HMHB1-202ENST00000638299 NRSN2Q9GZP1 204 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 SMG9Q9H0W8 520 aaKnown RBP3.17□□□□□ -1.9
HMHB1-202ENST00000638299 NMRK2Q9NPI5 230 aa3.17□□□□□ -1.9
HMHB1-202ENST00000638299 PRDM6Q9NQX0 595 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms