RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 CYLC1P35663 651 aaPredicted RBP16.29■□□□□ 0.2
CLN6-215ENST00000636674 LMAN1P49257 510 aa16.29■□□□□ 0.2
CLN6-215ENST00000636674 AARSP49588 968 aaKnown RBP eCLIP16.29■□□□□ 0.2
CLN6-215ENST00000636674 CDK17Q00537 523 aa16.29■□□□□ 0.2
CLN6-215ENST00000636674 CKAP4Q07065 602 aaKnown RBP16.29■□□□□ 0.2
CLN6-215ENST00000636674 COBLL1Q53SF7 1204 aa16.29■□□□□ 0.2
CLN6-215ENST00000636674 TYW1BQ6NUM6 668 aa16.29■□□□□ 0.2
CLN6-215ENST00000636674 CCDC170Q8IYT3 715 aa16.29■□□□□ 0.2
CLN6-215ENST00000636674 PNMA1Q8ND90 353 aa16.29■□□□□ 0.2
CLN6-215ENST00000636674 CELF1Q92879 486 aaKnown RBP16.29■□□□□ 0.2
CLN6-215ENST00000636674 IQCDQ96DY2 449 aa16.29■□□□□ 0.2
CLN6-215ENST00000636674 TMEM60Q9H2L4 133 aa16.29■□□□□ 0.2
CLN6-215ENST00000636674 EXOC1Q9NV70 894 aa16.29■□□□□ 0.2
CLN6-215ENST00000636674 VPS18Q9P253 973 aa16.29■□□□□ 0.2
CLN6-215ENST00000636674 TRIM10Q9UDY6 481 aa16.29■□□□□ 0.2
CLN6-215ENST00000636674 MKRN1Q9UHC7 482 aaKnown RBP16.29■□□□□ 0.2
CLN6-215ENST00000636674 GUCA1BQ9UMX6 200 aa16.29■□□□□ 0.2
CLN6-215ENST00000636674 FLT1P17948 1338 aa16.29■□□□□ 0.2
CLN6-215ENST00000636674 EIF3CLB5ME19 914 aaKnown RBP16.29■□□□□ 0.2
CLN6-215ENST00000636674 UBA7P41226 1012 aa16.29■□□□□ 0.2
CLN6-215ENST00000636674 GYS2P54840 703 aa16.29■□□□□ 0.2
CLN6-215ENST00000636674 GPKOWQ92917 476 aaPredicted RBP eCLIP16.29■□□□□ 0.2
CLN6-215ENST00000636674 PURBQ96QR8 312 aaKnown RBP16.29■□□□□ 0.2
CLN6-215ENST00000636674 EIF3CQ99613 913 aaKnown RBP16.29■□□□□ 0.2
CLN6-215ENST00000636674 DUSP9Q99956 384 aaKnown RBP16.29■□□□□ 0.2
CLN6-215ENST00000636674 SUGCTQ9HAC7 445 aa16.29■□□□□ 0.2
CLN6-215ENST00000636674 IL17RBQ9NRM6 502 aa16.29■□□□□ 0.2
CLN6-215ENST00000636674 TCP11L1Q9NUJ3 509 aa16.29■□□□□ 0.2
CLN6-215ENST00000636674 MAD2L2Q9UI95 211 aa16.29■□□□□ 0.2
CLN6-215ENST00000636674 SAR1BQ9Y6B6 198 aa16.29■□□□□ 0.2
CLN6-215ENST00000636674 A0A1W2PQJ5 194 aa16.28■□□□□ 0.2
CLN6-215ENST00000636674 BICDL2A1A5D9 508 aa16.28■□□□□ 0.2
CLN6-215ENST00000636674 KRT86O43790 486 aa16.28■□□□□ 0.2
CLN6-215ENST00000636674 CCNE1P24864 410 aa16.28■□□□□ 0.2
CLN6-215ENST00000636674 KLRK1P26718 216 aa16.28■□□□□ 0.2
CLN6-215ENST00000636674 PRDX5P30044 214 aa16.28■□□□□ 0.2
CLN6-215ENST00000636674 HIBADHP31937 336 aaKnown RBP16.28■□□□□ 0.2
CLN6-215ENST00000636674 MAP9Q49MG5 647 aa16.28■□□□□ 0.2
CLN6-215ENST00000636674 CCDC122Q5T0U0 273 aa16.28■□□□□ 0.2
CLN6-215ENST00000636674 C12orf60Q5U649 245 aa16.28■□□□□ 0.2
CLN6-215ENST00000636674 FAM114A1Q8IWE2 563 aa16.28■□□□□ 0.2
CLN6-215ENST00000636674 ANKRD2Q9GZV1 360 aa16.28■□□□□ 0.2
CLN6-215ENST00000636674 BARHL2Q9NY43 387 aa16.28■□□□□ 0.2
CLN6-215ENST00000636674 STXBP3O00186 592 aa16.28■□□□□ 0.2
CLN6-215ENST00000636674 ATP1A1P05023 1023 aaKnown RBP16.28■□□□□ 0.2
CLN6-215ENST00000636674 CAPN2P17655 700 aa16.28■□□□□ 0.2
CLN6-215ENST00000636674 ZBED6P86452 979 aa16.28■□□□□ 0.2
CLN6-215ENST00000636674 HSP90B2PQ58FF3 399 aa16.28■□□□□ 0.2
CLN6-215ENST00000636674 ZSCAN29Q8IWY8 852 aaPredicted RBP16.28■□□□□ 0.2
CLN6-215ENST00000636674 STAG2Q8N3U4 1231 aa16.28■□□□□ 0.2
CLN6-215ENST00000636674 RASGRP4Q8TDF6 673 aa16.28■□□□□ 0.2
CLN6-215ENST00000636674 SMARCC1Q92922 1105 aaPredicted RBP16.28■□□□□ 0.2
CLN6-215ENST00000636674 TUBGCP2Q9BSJ2 902 aa16.28■□□□□ 0.2
CLN6-215ENST00000636674 FAN1Q9Y2M0 1017 aa16.28■□□□□ 0.2
CLN6-215ENST00000636674 LRRIQ3A6PVS8 624 aaPredicted RBP16.27■□□□□ 0.2
CLN6-215ENST00000636674 PP2D1A8MPX8 630 aa16.27■□□□□ 0.2
CLN6-215ENST00000636674 APBA3O96018 575 aa16.27■□□□□ 0.2
CLN6-215ENST00000636674 TFAP4Q01664 338 aa16.27■□□□□ 0.2
CLN6-215ENST00000636674 EN1Q05925 392 aaPredicted RBP16.27■□□□□ 0.2
CLN6-215ENST00000636674 SLC35G1Q2M3R5 365 aa16.27■□□□□ 0.2
CLN6-215ENST00000636674 LRRC15Q8TF66 581 aa16.27■□□□□ 0.2
CLN6-215ENST00000636674 P2RX5Q93086 422 aa16.27■□□□□ 0.2
CLN6-215ENST00000636674 CCDC47Q96A33 483 aaKnown RBP16.27■□□□□ 0.2
CLN6-215ENST00000636674 JAKMIP2Q96AA8 810 aa16.27■□□□□ 0.2
CLN6-215ENST00000636674 ERGIC2Q96RQ1 377 aa16.27■□□□□ 0.2
CLN6-215ENST00000636674 LZTS2Q9BRK4 669 aa16.27■□□□□ 0.2
CLN6-215ENST00000636674 IRS2Q9Y4H2 1338 aa16.27■□□□□ 0.19
CLN6-215ENST00000636674 RASSF10A6NK89 507 aa16.26■□□□□ 0.19
CLN6-215ENST00000636674 B4DLN1 442 aa16.26■□□□□ 0.19
CLN6-215ENST00000636674 N4BP1O75113 896 aaKnown RBP16.26■□□□□ 0.19
CLN6-215ENST00000636674 IVLP07476 585 aa16.26■□□□□ 0.19
CLN6-215ENST00000636674 ORC2Q13416 577 aaPredicted RBP16.26■□□□□ 0.19
CLN6-215ENST00000636674 SPTY2D1Q68D10 685 aaPredicted RBP16.26■□□□□ 0.19
CLN6-215ENST00000636674 CSGALNACT2Q8N6G5 542 aa16.26■□□□□ 0.19
CLN6-215ENST00000636674 RASSF8Q8NHQ8 419 aa16.26■□□□□ 0.19
CLN6-215ENST00000636674 C7orf25Q9BPX7 421 aa16.26■□□□□ 0.19
CLN6-215ENST00000636674 ZNHIT6Q9NWK9 470 aaKnown RBP16.26■□□□□ 0.19
CLN6-215ENST00000636674 MCM9Q9NXL9 1143 aa16.26■□□□□ 0.19
CLN6-215ENST00000636674 BTAF1O14981 1849 aa16.26■□□□□ 0.19
CLN6-215ENST00000636674 DDX60LQ5H9U9 1706 aaKnown RBP16.26■□□□□ 0.19
CLN6-215ENST00000636674 RPS8P62241 208 aaKnown RBP16.26■□□□□ 0.19
CLN6-215ENST00000636674 INF2Q27J81 1249 aa16.26■□□□□ 0.19
CLN6-215ENST00000636674 LEKR1Q6ZMV7 388 aa16.26■□□□□ 0.19
CLN6-215ENST00000636674 KIAA1328Q86T90 577 aa16.26■□□□□ 0.19
CLN6-215ENST00000636674 CAMKK2Q96RR4 588 aa16.26■□□□□ 0.19
CLN6-215ENST00000636674 MMS19Q96T76 1030 aa16.26■□□□□ 0.19
CLN6-215ENST00000636674 TSGA10Q9BZW7 698 aa16.26■□□□□ 0.19
CLN6-215ENST00000636674 TRIM9Q9C026 710 aa16.26■□□□□ 0.19
CLN6-215ENST00000636674 PALM3A6NDB9 673 aaPredicted RBP16.25■□□□□ 0.19
CLN6-215ENST00000636674 CYTH3O43739 400 aa16.25■□□□□ 0.19
CLN6-215ENST00000636674 IPO7O95373 1038 aaKnown RBP16.25■□□□□ 0.19
CLN6-215ENST00000636674 USP17L8P0C7I0 530 aa16.25■□□□□ 0.19
CLN6-215ENST00000636674 TRIM21P19474 475 aaKnown RBP16.25■□□□□ 0.19
CLN6-215ENST00000636674 HNRNPH3P31942 346 aaKnown RBP16.25■□□□□ 0.19
CLN6-215ENST00000636674 RUBCNQ92622 972 aa16.25■□□□□ 0.19
CLN6-215ENST00000636674 ACSBG1Q96GR2 724 aa16.25■□□□□ 0.19
CLN6-215ENST00000636674 CNOT6LQ96LI5 555 aaKnown RBP16.25■□□□□ 0.19
CLN6-215ENST00000636674 ZMYND12Q9H0C1 365 aa16.25■□□□□ 0.19
CLN6-215ENST00000636674 NHEJ1Q9H9Q4 299 aaPredicted RBP16.25■□□□□ 0.19
CLN6-215ENST00000636674 TMEM51Q9NW97 253 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms