RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 SLFN12Q8IYM2 578 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 S100BP04271 92 aaPredicted RBP9.95□□□□□ -0.82
CSMD1-218ENST00000635120 RASSF7Q02833 373 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 PPM1KQ8N3J5 372 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 EEF2KMTQ96G04 330 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 OR52Z1P0C646 297 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 AP1ARQ63HQ0 302 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 PDZD4Q76G19 769 aaPredicted RBP9.95□□□□□ -0.82
CSMD1-218ENST00000635120 LARGE2Q8N3Y3 721 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 ASXL2Q76L83 1435 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 MED23Q9ULK4 1368 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 LMNB1P20700 586 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 MFSD14BQ5SR56 506 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 GPT2Q8TD30 523 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 DSCC1Q9BVC3 393 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 PFDN1O60925 122 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 NDUFA8P51970 172 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 IFRD2Q12894 506 aaPredicted RBP9.94□□□□□ -0.82
CSMD1-218ENST00000635120 BFSP1Q12934 665 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 PPWD1Q96BP3 646 aaKnown RBP9.94□□□□□ -0.82
CSMD1-218ENST00000635120 CARD14Q9BXL6 1004 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 IPO11Q9UI26 975 aaKnown RBP9.94□□□□□ -0.82
CSMD1-218ENST00000635120 EVI5O60447 810 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 PRKG1Q13976 671 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 SESTD1Q86VW0 696 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 CCDC24Q8N4L8 307 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 NUB1Q9Y5A7 615 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 PALM3A6NDB9 673 aaPredicted RBP9.94□□□□□ -0.82
CSMD1-218ENST00000635120 TNNC2P02585 160 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 COBLO75128 1261 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 PPP1R13BQ96KQ4 1090 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 SHANK2Q9UPX8 1470 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 ARHGEF10O15013 1369 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 PSDA5PKW4 1024 aaPredicted RBP9.94□□□□□ -0.82
CSMD1-218ENST00000635120 SGK1O00141 431 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 NSFP46459 744 aaKnown RBP9.94□□□□□ -0.82
CSMD1-218ENST00000635120 POLR2FP61218 127 aaKnown RBP9.94□□□□□ -0.82
CSMD1-218ENST00000635120 SCYL3Q8IZE3 742 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 LARSQ9P2J5 1176 aaKnown RBP9.94□□□□□ -0.82
CSMD1-218ENST00000635120 IL9RQ01113 521 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 MYL7Q01449 175 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 POC1B-GALNT4F8VUJ3 575 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 ZMYND10O75800 440 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 IL1RL1Q01638 556 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 PDCD7Q8N8D1 485 aaKnown RBP9.94□□□□□ -0.82
CSMD1-218ENST00000635120 ARPP21Q9UBL0 812 aaPredicted RBP9.94□□□□□ -0.82
CSMD1-218ENST00000635120 TRIM35Q9UPQ4 493 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 SYMPKQ92797 1274 aaKnown RBP9.94□□□□□ -0.82
CSMD1-218ENST00000635120 BTG4Q9NY30 223 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 THEGQ9P2T0 379 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 PTPRKQ15262 1439 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 GTPBP6O43824 516 aaPredicted RBP9.94□□□□□ -0.82
CSMD1-218ENST00000635120 BRD1O95696 1058 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 INHBAP08476 426 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 NLRP7Q8WX94 980 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 CCDC127Q96BQ5 260 aa9.94□□□□□ -0.82
CSMD1-218ENST00000635120 MAP2P11137 1827 aaKnown RBP9.94□□□□□ -0.82
CSMD1-218ENST00000635120 H7C0C1 242 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 ATP5OP48047 213 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 RABGGTAQ92696 567 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 DISC1Q9NRI5 854 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 HOXB7P09629 217 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 GARSP41250 739 aaKnown RBP9.93□□□□□ -0.82
CSMD1-218ENST00000635120 ZBTB8OSQ8IWT0 167 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.93□□□□□ -0.82
CSMD1-218ENST00000635120 CTSWP56202 376 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 TMTC3Q6ZXV5 915 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 CLIC6Q96NY7 704 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 RGS12O14924 1447 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 SLC52A2Q9HAB3 445 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 PCDHA7Q9UN72 937 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 PCDHB4Q9Y5E5 795 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 LRRD1A4D1F6 860 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 GCP02774 474 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 TCP1P17987 556 aaKnown RBP9.93□□□□□ -0.82
CSMD1-218ENST00000635120 RASIP1Q5U651 963 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 SMCR8Q8TEV9 937 aaPredicted RBP9.93□□□□□ -0.82
CSMD1-218ENST00000635120 NOC2LQ9Y3T9 749 aaKnown RBP9.93□□□□□ -0.82
CSMD1-218ENST00000635120 A6NJR5 290 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 PFDN6O15212 129 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 DRC3Q9H069 523 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.93□□□□□ -0.82
CSMD1-218ENST00000635120 CFAP74Q9C0B2 1584 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 H7C1D1 291 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 DNAJC8O75937 253 aaPredicted RBP9.93□□□□□ -0.82
CSMD1-218ENST00000635120 PIK3R5Q8WYR1 880 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 GJA10Q969M2 543 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 TESK2Q96S53 571 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 INTUQ9ULD6 942 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 ZNF148Q9UQR1 794 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 ATP5JP18859 108 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 HADHQ16836 314 aaKnown RBP9.93□□□□□ -0.82
CSMD1-218ENST00000635120 IFT122Q9HBG6 1241 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 KCNG1Q9UIX4 513 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 EPN1Q9Y6I3 576 aaPredicted RBP9.93□□□□□ -0.82
CSMD1-218ENST00000635120 ATP7AQ04656 1500 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 TTC4O95801 387 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 APOEP02649 317 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 EEF1GP26641 437 aaKnown RBP9.93□□□□□ -0.82
CSMD1-218ENST00000635120 TMOD1P28289 359 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms