RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 TTLL1O95922 423 aa9.31□□□□□ -0.92
CLK1-215ENST00000621181 MRPS5P82675 430 aaKnown RBP9.31□□□□□ -0.92
CLK1-215ENST00000621181 CNTN2Q02246 1040 aa9.31□□□□□ -0.92
CLK1-215ENST00000621181 TNFAIP2Q03169 654 aa9.31□□□□□ -0.92
CLK1-215ENST00000621181 IKQ13123 557 aaPredicted RBP9.31□□□□□ -0.92
CLK1-215ENST00000621181 CXCL17Q6UXB2 119 aa9.31□□□□□ -0.92
CLK1-215ENST00000621181 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.31□□□□□ -0.92
CLK1-215ENST00000621181 OTOP2Q7RTS6 562 aa9.31□□□□□ -0.92
CLK1-215ENST00000621181 TLK2Q86UE8 772 aa9.31□□□□□ -0.92
CLK1-215ENST00000621181 LRRC47Q8N1G4 583 aaKnown RBP9.31□□□□□ -0.92
CLK1-215ENST00000621181 ADAMTS19Q8TE59 1207 aa9.31□□□□□ -0.92
CLK1-215ENST00000621181 HERVK_113Q902F9 699 aa9.31□□□□□ -0.92
CLK1-215ENST00000621181 SPOCK2Q92563 424 aa9.31□□□□□ -0.92
CLK1-215ENST00000621181 FGD4Q96M96 766 aa9.31□□□□□ -0.92
CLK1-215ENST00000621181 LRRCC1Q9C099 1032 aa9.31□□□□□ -0.92
CLK1-215ENST00000621181 CHMP4BQ9H444 224 aaKnown RBP9.31□□□□□ -0.92
CLK1-215ENST00000621181 ACAD9Q9H845 621 aa9.31□□□□□ -0.92
CLK1-215ENST00000621181 IL23AQ9NPF7 189 aa9.31□□□□□ -0.92
CLK1-215ENST00000621181 MTMR4Q9NYA4 1195 aa9.31□□□□□ -0.92
CLK1-215ENST00000621181 CXXC1Q9P0U4 656 aaPredicted RBP9.31□□□□□ -0.92
CLK1-215ENST00000621181 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.31□□□□□ -0.92
CLK1-215ENST00000621181 CD4P01730 458 aa9.31□□□□□ -0.92
CLK1-215ENST00000621181 FGBP02675 491 aa9.31□□□□□ -0.92
CLK1-215ENST00000621181 STAT2P52630 851 aa9.31□□□□□ -0.92
CLK1-215ENST00000621181 ITGA7Q13683 1181 aa9.31□□□□□ -0.92
CLK1-215ENST00000621181 GMCL1P1Q8NEA9 526 aa9.31□□□□□ -0.92
CLK1-215ENST00000621181 UHRF1Q96T88 793 aaPredicted RBP9.31□□□□□ -0.92
CLK1-215ENST00000621181 NKX2-4Q9H2Z4 354 aa9.31□□□□□ -0.92
CLK1-215ENST00000621181 SYNPO2Q9UMS6 1093 aa9.31□□□□□ -0.92
CLK1-215ENST00000621181 IGKV6D-41A0A0C4DH26 115 aa9.3□□□□□ -0.92
CLK1-215ENST00000621181 ASB14A6NK59 587 aa9.3□□□□□ -0.92
CLK1-215ENST00000621181 TMEM232C9JQI7 657 aa9.3□□□□□ -0.92
CLK1-215ENST00000621181 CTAGE5O15320 804 aa9.3□□□□□ -0.92
CLK1-215ENST00000621181 ZEB2O60315 1214 aa9.3□□□□□ -0.92
CLK1-215ENST00000621181 CABYRO75952 493 aa9.3□□□□□ -0.92
CLK1-215ENST00000621181 TSPY3P0CV98 308 aa9.3□□□□□ -0.92
CLK1-215ENST00000621181 TSPY8P0CW00 308 aa9.3□□□□□ -0.92
CLK1-215ENST00000621181 FDX1P10109 184 aa9.3□□□□□ -0.92
CLK1-215ENST00000621181 BMP3P12645 472 aa9.3□□□□□ -0.92
CLK1-215ENST00000621181 GNAT2P19087 354 aa9.3□□□□□ -0.92
CLK1-215ENST00000621181 CCL23P55773 120 aa9.3□□□□□ -0.92
CLK1-215ENST00000621181 ADGRE1Q14246 886 aa9.3□□□□□ -0.92
CLK1-215ENST00000621181 FSCN1Q16658 493 aaKnown RBP9.3□□□□□ -0.92
CLK1-215ENST00000621181 SLFN13Q68D06 897 aa9.3□□□□□ -0.92
CLK1-215ENST00000621181 KBTBD3Q8NAB2 608 aa9.3□□□□□ -0.92
CLK1-215ENST00000621181 APPBP2Q92624 585 aa9.3□□□□□ -0.92
CLK1-215ENST00000621181 OSBP2Q969R2 916 aa9.3□□□□□ -0.92
CLK1-215ENST00000621181 MKL1Q969V6 931 aa9.3□□□□□ -0.92
CLK1-215ENST00000621181 GPATCH3Q96I76 525 aa9.3□□□□□ -0.92
CLK1-215ENST00000621181 KATNBL1Q9H079 304 aa9.3□□□□□ -0.92
CLK1-215ENST00000621181 AP5M1Q9H0R1 490 aa9.3□□□□□ -0.92
CLK1-215ENST00000621181 A1CFQ9NQ94 594 aaKnown RBP9.3□□□□□ -0.92
CLK1-215ENST00000621181 ECHDC1Q9NTX5 307 aa9.3□□□□□ -0.92
CLK1-215ENST00000621181 UMODL1Q5DID0 1318 aa9.3□□□□□ -0.92
CLK1-215ENST00000621181 GPAA1O43292 621 aa9.29□□□□□ -0.92
CLK1-215ENST00000621181 SMARCA5O60264 1052 aaPredicted RBP9.29□□□□□ -0.92
CLK1-215ENST00000621181 SLC1A4P43007 532 aa9.29□□□□□ -0.92
CLK1-215ENST00000621181 PPP2R2DQ66LE6 453 aa9.29□□□□□ -0.92
CLK1-215ENST00000621181 EEPD1Q7L9B9 569 aa9.29□□□□□ -0.92
CLK1-215ENST00000621181 MICALL1Q8N3F8 863 aa9.29□□□□□ -0.92
CLK1-215ENST00000621181 FAM133AQ8N9E0 248 aa9.29□□□□□ -0.92
CLK1-215ENST00000621181 CHURC1Q8WUH1 139 aa9.29□□□□□ -0.92
CLK1-215ENST00000621181 CHMP4CQ96CF2 233 aa9.29□□□□□ -0.92
CLK1-215ENST00000621181 EPB41L4AQ9HCS5 686 aaPredicted RBP9.29□□□□□ -0.92
CLK1-215ENST00000621181 RNF146Q9NTX7 359 aa9.29□□□□□ -0.92
CLK1-215ENST00000621181 GNEQ9Y223 722 aaKnown RBP9.29□□□□□ -0.92
CLK1-215ENST00000621181 ASTN1O14525 1302 aa9.29□□□□□ -0.92
CLK1-215ENST00000621181 GBF1Q92538 1859 aa9.29□□□□□ -0.92
CLK1-215ENST00000621181 ZBBXA8MT70 800 aa9.28□□□□□ -0.92
CLK1-215ENST00000621181 DYNC1LI2O43237 492 aaPredicted RBP9.28□□□□□ -0.92
CLK1-215ENST00000621181 B4GALT4O60513 344 aa9.28□□□□□ -0.92
CLK1-215ENST00000621181 ZFYP08048 801 aaPredicted RBP9.28□□□□□ -0.92
CLK1-215ENST00000621181 ALAS1P13196 640 aa9.28□□□□□ -0.92
CLK1-215ENST00000621181 RABGGTBP53611 331 aa9.28□□□□□ -0.92
CLK1-215ENST00000621181 NKX3-2P78367 333 aa9.28□□□□□ -0.92
CLK1-215ENST00000621181 PDE4BQ07343 736 aa9.28□□□□□ -0.92
CLK1-215ENST00000621181 FAM160B2Q86V87 743 aa9.28□□□□□ -0.92
CLK1-215ENST00000621181 RPUSD2Q8IZ73 545 aaKnown RBP9.28□□□□□ -0.92
CLK1-215ENST00000621181 SLC43A3Q8NBI5 491 aa9.28□□□□□ -0.92
CLK1-215ENST00000621181 AGBL1Q96MI9 1066 aa9.28□□□□□ -0.92
CLK1-215ENST00000621181 TRERF1Q96PN7 1200 aa9.28□□□□□ -0.92
CLK1-215ENST00000621181 PHF12Q96QT6 1004 aa9.28□□□□□ -0.92
CLK1-215ENST00000621181 NACAP1Q9BZK3 213 aa9.28□□□□□ -0.92
CLK1-215ENST00000621181 TRPV6Q9H1D0 765 aa9.28□□□□□ -0.92
CLK1-215ENST00000621181 YBX2Q9Y2T7 364 aaKnown RBP9.28□□□□□ -0.92
CLK1-215ENST00000621181 SLC4A7Q9Y6M7 1214 aa9.28□□□□□ -0.92
CLK1-215ENST00000621181 RNF113AO15541 343 aaKnown RBP9.28□□□□□ -0.92
CLK1-215ENST00000621181 SLC3A2P08195 630 aaKnown RBP9.28□□□□□ -0.92
CLK1-215ENST00000621181 ATP2A2P16615 1042 aaKnown RBP9.28□□□□□ -0.92
CLK1-215ENST00000621181 SMPD1P17405 629 aa9.28□□□□□ -0.92
CLK1-215ENST00000621181 PTGS1P23219 599 aa9.28□□□□□ -0.92
CLK1-215ENST00000621181 MCCP23508 829 aa9.28□□□□□ -0.92
CLK1-215ENST00000621181 SKIV2LQ15477 1246 aaKnown RBP9.28□□□□□ -0.92
CLK1-215ENST00000621181 TSHZ3Q63HK5 1081 aa9.28□□□□□ -0.92
CLK1-215ENST00000621181 FBXO16Q8IX29 292 aaPredicted RBP9.28□□□□□ -0.92
CLK1-215ENST00000621181 NOC4LQ9BVI4 516 aaKnown RBP9.28□□□□□ -0.92
CLK1-215ENST00000621181 SEZ6LQ9BYH1 1024 aa9.28□□□□□ -0.92
CLK1-215ENST00000621181 RAPGEFL1Q9UHV5 662 aa9.28□□□□□ -0.92
CLK1-215ENST00000621181 STX8Q9UNK0 236 aa9.28□□□□□ -0.92
CLK1-215ENST00000621181 BDP1A6H8Y1 2624 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms