RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 CAVIN4Q5BKX8 364 aa8.66□□□□□ -1.02
SCAMP1-206ENST00000618166 EP400NLQ6ZTU2 488 aa8.66□□□□□ -1.02
SCAMP1-206ENST00000618166 KLHDC9Q8NEP7 349 aa8.66□□□□□ -1.02
SCAMP1-206ENST00000618166 GTF3C2Q8WUA4 911 aaPredicted RBP8.66□□□□□ -1.02
SCAMP1-206ENST00000618166 MAML3Q96JK9 1138 aa8.66□□□□□ -1.02
SCAMP1-206ENST00000618166 TSEN34Q9BSV6 310 aaKnown RBP8.66□□□□□ -1.02
SCAMP1-206ENST00000618166 TBC1D2Q9BYX2 928 aa8.66□□□□□ -1.02
SCAMP1-206ENST00000618166 SUGCTQ9HAC7 445 aa8.66□□□□□ -1.02
SCAMP1-206ENST00000618166 PDGFBP01127 241 aaPredicted RBP8.65□□□□□ -1.02
SCAMP1-206ENST00000618166 GSK3AP49840 483 aa8.65□□□□□ -1.02
SCAMP1-206ENST00000618166 ZXDAP98168 799 aa8.65□□□□□ -1.02
SCAMP1-206ENST00000618166 CLUL1Q15846 466 aa8.65□□□□□ -1.02
SCAMP1-206ENST00000618166 CCDC57Q2TAC2 916 aa8.65□□□□□ -1.02
SCAMP1-206ENST00000618166 G2E3Q7L622 706 aa8.65□□□□□ -1.02
SCAMP1-206ENST00000618166 DEFB128Q7Z7B8 93 aa8.65□□□□□ -1.02
SCAMP1-206ENST00000618166 HERC6Q8IVU3 1022 aa8.65□□□□□ -1.02
SCAMP1-206ENST00000618166 KIAA2013Q8IYS2 634 aa8.65□□□□□ -1.02
SCAMP1-206ENST00000618166 KCNV2Q8TDN2 545 aa8.65□□□□□ -1.02
SCAMP1-206ENST00000618166 NKD2Q969F2 451 aaPredicted RBP8.65□□□□□ -1.02
SCAMP1-206ENST00000618166 VTI1AQ96AJ9 217 aa8.65□□□□□ -1.02
SCAMP1-206ENST00000618166 NOC4LQ9BVI4 516 aaKnown RBP8.65□□□□□ -1.02
SCAMP1-206ENST00000618166 MOV10L1Q9BXT6 1211 aaKnown RBP8.65□□□□□ -1.02
SCAMP1-206ENST00000618166 IRF2BPLQ9H1B7 796 aa8.65□□□□□ -1.02
SCAMP1-206ENST00000618166 LMCD1Q9NZU5 365 aa8.65□□□□□ -1.02
SCAMP1-206ENST00000618166 ZNF236Q9UL36 1845 aa8.65□□□□□ -1.02
SCAMP1-206ENST00000618166 SPEGQ15772 3267 aa8.65□□□□□ -1.03
SCAMP1-206ENST00000618166 UNC79Q9P2D8 2635 aa8.64□□□□□ -1.03
SCAMP1-206ENST00000618166 A0A0U1RQG5 324 aaPredicted RBP8.64□□□□□ -1.03
SCAMP1-206ENST00000618166 MOXD2PA6NHM9 499 aa8.64□□□□□ -1.03
SCAMP1-206ENST00000618166 USP17L10C9JJH3 530 aa8.64□□□□□ -1.03
SCAMP1-206ENST00000618166 CAPN5O15484 640 aaPredicted RBP8.64□□□□□ -1.03
SCAMP1-206ENST00000618166 GDF11O95390 407 aa8.64□□□□□ -1.03
SCAMP1-206ENST00000618166 ASGR1P07306 291 aa8.64□□□□□ -1.03
SCAMP1-206ENST00000618166 ZNF865P0CJ78 1059 aaPredicted RBP8.64□□□□□ -1.03
SCAMP1-206ENST00000618166 ZEB1P37275 1124 aaPredicted RBP8.64□□□□□ -1.03
SCAMP1-206ENST00000618166 C8orf58Q8NAV2 365 aa8.64□□□□□ -1.03
SCAMP1-206ENST00000618166 ASIC4Q96FT7 647 aa8.64□□□□□ -1.03
SCAMP1-206ENST00000618166 GLT1D1Q96MS3 346 aa8.64□□□□□ -1.03
SCAMP1-206ENST00000618166 SMCHD1A6NHR9 2005 aa8.64□□□□□ -1.03
SCAMP1-206ENST00000618166 ELP1O95163 1332 aa8.64□□□□□ -1.03
SCAMP1-206ENST00000618166 C19orf81C9J6K1 198 aa8.63□□□□□ -1.03
SCAMP1-206ENST00000618166 TLR3O15455 904 aaKnown RBP8.63□□□□□ -1.03
SCAMP1-206ENST00000618166 SIAH2O43255 324 aa8.63□□□□□ -1.03
SCAMP1-206ENST00000618166 ADCY6O43306 1168 aa8.63□□□□□ -1.03
SCAMP1-206ENST00000618166 LDHBP07195 334 aaKnown RBP8.63□□□□□ -1.03
SCAMP1-206ENST00000618166 ERCC3P19447 782 aa8.63□□□□□ -1.03
SCAMP1-206ENST00000618166 LMOD3Q0VAK6 560 aa8.63□□□□□ -1.03
SCAMP1-206ENST00000618166 LRRC24Q50LG9 513 aa8.63□□□□□ -1.03
SCAMP1-206ENST00000618166 KCTD17Q8N5Z5 321 aa8.63□□□□□ -1.03
SCAMP1-206ENST00000618166 WDR66Q8TBY9 1149 aa8.63□□□□□ -1.03
SCAMP1-206ENST00000618166 AGBL1Q96MI9 1066 aa8.63□□□□□ -1.03
SCAMP1-206ENST00000618166 TRPV6Q9H1D0 765 aa8.63□□□□□ -1.03
SCAMP1-206ENST00000618166 ROBO3Q96MS0 1386 aa8.63□□□□□ -1.03
SCAMP1-206ENST00000618166 GPR179Q6PRD1 2367 aa8.63□□□□□ -1.03
SCAMP1-206ENST00000618166 ZIC2O95409 532 aaPredicted RBP8.62□□□□□ -1.03
SCAMP1-206ENST00000618166 PGK2P07205 417 aa8.62□□□□□ -1.03
SCAMP1-206ENST00000618166 AKR1A1P14550 325 aa8.62□□□□□ -1.03
SCAMP1-206ENST00000618166 BTDP43251 543 aa8.62□□□□□ -1.03
SCAMP1-206ENST00000618166 PUM1Q14671 1186 aaKnown RBP eCLIP8.62□□□□□ -1.03
SCAMP1-206ENST00000618166 CATSPERGQ6ZRH7 1159 aa8.62□□□□□ -1.03
SCAMP1-206ENST00000618166 RPUSD2Q8IZ73 545 aaKnown RBP8.62□□□□□ -1.03
SCAMP1-206ENST00000618166 VGLL2Q8N8G2 317 aa8.62□□□□□ -1.03
SCAMP1-206ENST00000618166 SLC9A7Q96T83 725 aa8.62□□□□□ -1.03
SCAMP1-206ENST00000618166 USB1Q9BQ65 265 aaKnown RBP8.62□□□□□ -1.03
SCAMP1-206ENST00000618166 DNAJC18Q9H819 358 aa8.62□□□□□ -1.03
SCAMP1-206ENST00000618166 USP17L15C9J2P7 530 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 USP17L13C9JLJ4 530 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 USP17L11C9JVI0 530 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 USP17L18D6R9N7 530 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 USP17L22D6RA61 530 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 USP17L17D6RBQ6 530 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 USP17L19D6RCP7 530 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 USP17L20D6RJB6 530 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 VSIG8P0DPA2 414 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 LTBRP36941 435 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 RHBDL3P58872 404 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 DLX2Q07687 328 aaPredicted RBP8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 USP17L24Q0WX57 530 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 SMAD2Q15796 467 aaKnown RBP8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 MROH5Q6ZUA9 1318 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 STXBP3O00186 592 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 STRNO43815 780 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 B4GALT4O60513 344 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 C6orf222P0C671 652 aaPredicted RBP8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 VCAM1P19320 739 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 SIGLEC14Q08ET2 396 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 TCEAL5Q5H9L2 206 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 METTL24Q5JXM2 366 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 USP17L2Q6R6M4 530 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 LBX2Q6XYB7 198 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 CCDC146Q8IYE0 955 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 TSPYL6Q8N831 410 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 NLRP7Q8WX94 980 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 PABPC5Q96DU9 382 aaKnown RBP8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 TINF2Q9BSI4 451 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 MYH16Q9H6N6 1097 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 SH2B1Q9NRF2 756 aaPredicted RBP8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 CLDND1Q9NY35 253 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 DLL3Q9NYJ7 618 aa8.61□□□□□ -1.03
SCAMP1-206ENST00000618166 FAM50BQ9Y247 325 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms