RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 ALS2CLQ60I27 953 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 WDR59Q6PJI9 974 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 IFNL2Q8IZJ0 200 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 ZNF579Q8NAF0 562 aaKnown RBP7.4□□□□□ -1.22
LMO3-235ENST00000616247 AENQ8WTP8 325 aaKnown RBP7.4□□□□□ -1.22
LMO3-235ENST00000616247 SDR42E1Q8WUS8 393 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 TAF4BQ92750 862 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 FERMT2Q96AC1 680 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 THOC1Q96FV9 657 aaKnown RBP7.4□□□□□ -1.22
LMO3-235ENST00000616247 EPN3Q9H201 632 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 PLAAQ9Y263 795 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 SEMA3EO15041 775 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 KIF1CO43896 1103 aaKnown RBP7.4□□□□□ -1.22
LMO3-235ENST00000616247 EHHADHQ08426 723 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 PDE4DQ08499 809 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 TRADDQ15628 312 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 ZNF658Q5TYW1 1059 aaPredicted RBP7.4□□□□□ -1.22
LMO3-235ENST00000616247 EMBQ6PCB8 327 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 CATIPQ7Z7H3 387 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 MYCBPAPQ8TBZ2 947 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 MICAL1Q8TDZ2 1067 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 HPS3Q969F9 1004 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 GPR108Q9NPR9 543 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 FBXO3Q9UK99 471 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 PCDHA13Q9Y5I0 950 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 SPATA31D1Q6ZQQ2 1576 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 ITIH6Q6UXX5 1313 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 ZC3H4Q9UPT8 1303 aaKnown RBP7.4□□□□□ -1.22
LMO3-235ENST00000616247 GCOM1H8Y6P7 765 aaPredicted RBP7.4□□□□□ -1.23
LMO3-235ENST00000616247 OPLAHO14841 1288 aa7.4□□□□□ -1.23
LMO3-235ENST00000616247 GLI1P08151 1106 aa7.4□□□□□ -1.23
LMO3-235ENST00000616247 MYZAPP0CAP1 466 aa7.4□□□□□ -1.23
LMO3-235ENST00000616247 TCP1P17987 556 aaKnown RBP7.4□□□□□ -1.23
LMO3-235ENST00000616247 MMP14P50281 582 aa7.4□□□□□ -1.23
LMO3-235ENST00000616247 BIRC2Q13490 618 aa7.4□□□□□ -1.23
LMO3-235ENST00000616247 PTGISQ16647 500 aa7.4□□□□□ -1.23
LMO3-235ENST00000616247 CFAP221Q4G0U5 840 aa7.4□□□□□ -1.23
LMO3-235ENST00000616247 IFIT1BQ5T764 474 aaKnown RBP7.4□□□□□ -1.23
LMO3-235ENST00000616247 CREG2Q8IUH2 290 aa7.4□□□□□ -1.23
LMO3-235ENST00000616247 PARP9Q8IXQ6 854 aa7.4□□□□□ -1.23
LMO3-235ENST00000616247 CACNA2D3Q8IZS8 1091 aa7.4□□□□□ -1.23
LMO3-235ENST00000616247 CNOT6LQ96LI5 555 aaKnown RBP7.4□□□□□ -1.23
LMO3-235ENST00000616247 ORAI2Q96SN7 254 aa7.4□□□□□ -1.23
LMO3-235ENST00000616247 SELENOSQ9BQE4 189 aa7.4□□□□□ -1.23
LMO3-235ENST00000616247 CNNM2Q9H8M5 875 aa7.4□□□□□ -1.23
LMO3-235ENST00000616247 CAPN11Q9UMQ6 739 aa7.4□□□□□ -1.23
LMO3-235ENST00000616247 C3P01024 1663 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 CYP2D7A0A087X1C5 515 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 SMIM22K7EJ46 135 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 CTNNA1P35221 906 aaKnown RBP7.39□□□□□ -1.23
LMO3-235ENST00000616247 MDH1P40925 334 aaKnown RBP7.39□□□□□ -1.23
LMO3-235ENST00000616247 KIF11P52732 1056 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 MYO1EQ12965 1108 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 DDX42Q86XP3 938 aaKnown RBP eCLIP7.39□□□□□ -1.23
LMO3-235ENST00000616247 UHMK1Q8TAS1 419 aaKnown RBP7.39□□□□□ -1.23
LMO3-235ENST00000616247 CABLES1Q8TDN4 633 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 ZNF526Q8TF50 670 aaPredicted RBP7.39□□□□□ -1.23
LMO3-235ENST00000616247 STRBPQ96SI9 672 aaKnown RBP7.39□□□□□ -1.23
LMO3-235ENST00000616247 TRIM6Q9C030 488 aaPredicted RBP7.39□□□□□ -1.23
LMO3-235ENST00000616247 FER1L4A9Z1Z3 1794 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 TNKSO95271 1327 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 ABCC6O95255 1503 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 PHF20L1A8MW92 1017 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 NBPF26B4DH59 902 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 LIFRP42702 1097 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 SARNPP82979 210 aaKnown RBP7.39□□□□□ -1.23
LMO3-235ENST00000616247 ZBED6P86452 979 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 KRT71Q3SY84 523 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 HAUS3Q68CZ6 603 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 NBPF10Q6P3W6 841 aaKnown RBP7.39□□□□□ -1.23
LMO3-235ENST00000616247 CYB5D1Q6P9G0 228 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 FNBP4Q8N3X1 1017 aaPredicted RBP7.39□□□□□ -1.23
LMO3-235ENST00000616247 NBPF15Q8N660 670 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 ARFGAP2Q8N6H7 521 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 MIEF2Q96C03 454 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 CYFIP2Q96F07 1278 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 SH3GL2Q99962 352 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 TSGA10Q9BZW7 698 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 GGT7Q9UJ14 662 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 NOVA2Q9UNW9 492 aaKnown RBP7.39□□□□□ -1.23
LMO3-235ENST00000616247 PXDNQ92626 1479 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 ITSN1Q15811 1721 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 CCDC194A0A1B0GVG4 234 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 ZNF233A6NK53 670 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 CEP104O60308 925 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 ITGA6P23229 1130 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 GFPT1Q06210 699 aaPredicted RBP7.39□□□□□ -1.23
LMO3-235ENST00000616247 PRPF4BQ13523 1007 aaKnown RBP7.39□□□□□ -1.23
LMO3-235ENST00000616247 TBC1D1Q86TI0 1168 aaPredicted RBP7.39□□□□□ -1.23
LMO3-235ENST00000616247 SGMS1Q86VZ5 419 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 FBXL16Q8N461 479 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 RSRC1Q96IZ7 334 aaKnown RBP7.39□□□□□ -1.23
LMO3-235ENST00000616247 NOX5Q96PH1 765 aa7.39□□□□□ -1.23
LMO3-235ENST00000616247 ANO9A1A5B4 782 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 A6NNZ2 444 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 FSBPO95073 299 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 BMP15O95972 392 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 PHKG2P15735 406 aa7.38□□□□□ -1.23
LMO3-235ENST00000616247 CALRP27797 417 aaKnown RBP7.38□□□□□ -1.23
LMO3-235ENST00000616247 FNTAP49354 379 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms