RNA–Protein interactions for RNA: ENST00000614565.4

CDH4-203, Transcript of cadherin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH4, Length 6,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-203ENST00000614565 ZFYVE9O95405 1425 aa13.9□□□□□ -0.18
CDH4-203ENST00000614565 NACC1Q96RE7 527 aa13.9□□□□□ -0.18
CDH4-203ENST00000614565 ATP8A2Q9NTI2 1148 aa13.9□□□□□ -0.18
CDH4-203ENST00000614565 ERCC5P28715 1186 aaPredicted RBP13.9□□□□□ -0.19
CDH4-203ENST00000614565 IFNL3Q8IZI9 196 aa13.9□□□□□ -0.19
CDH4-203ENST00000614565 SH3RF3Q8TEJ3 882 aaPredicted RBP13.9□□□□□ -0.19
CDH4-203ENST00000614565 SPATA33Q96N06 139 aa13.9□□□□□ -0.19
CDH4-203ENST00000614565 RNF208Q9H0X6 261 aa13.9□□□□□ -0.19
CDH4-203ENST00000614565 EVI5O60447 810 aa13.89□□□□□ -0.19
CDH4-203ENST00000614565 TULP4Q9NRJ4 1543 aa13.89□□□□□ -0.19
CDH4-203ENST00000614565 MECOMQ03112 1051 aa13.89□□□□□ -0.19
CDH4-203ENST00000614565 STX1AQ16623 288 aa13.89□□□□□ -0.19
CDH4-203ENST00000614565 TTC38Q5R3I4 469 aa13.89□□□□□ -0.19
CDH4-203ENST00000614565 ALKBH8Q96BT7 664 aaKnown RBP13.89□□□□□ -0.19
CDH4-203ENST00000614565 NUDT12Q9BQG2 462 aa13.89□□□□□ -0.19
CDH4-203ENST00000614565 ZSWIM4Q9H7M6 989 aa13.89□□□□□ -0.19
CDH4-203ENST00000614565 KANSL2Q9H9L4 492 aa13.89□□□□□ -0.19
CDH4-203ENST00000614565 SLF1Q9BQI6 1058 aa13.89□□□□□ -0.19
CDH4-203ENST00000614565 LZTS2Q9BRK4 669 aa13.89□□□□□ -0.19
CDH4-203ENST00000614565 YIPF2Q9BWQ6 316 aa13.89□□□□□ -0.19
CDH4-203ENST00000614565 PPP1R12CQ9BZL4 782 aa13.89□□□□□ -0.19
CDH4-203ENST00000614565 BZW2Q9Y6E2 419 aaKnown RBP13.89□□□□□ -0.19
CDH4-203ENST00000614565 NUCB1Q02818 461 aa13.89□□□□□ -0.19
CDH4-203ENST00000614565 CABP7Q86V35 215 aa13.89□□□□□ -0.19
CDH4-203ENST00000614565 CEP63Q96MT8 703 aa13.89□□□□□ -0.19
CDH4-203ENST00000614565 AMNQ9BXJ7 453 aa13.89□□□□□ -0.19
CDH4-203ENST00000614565 USP25Q9UHP3 1055 aa13.89□□□□□ -0.19
CDH4-203ENST00000614565 SRGAP2BP0DMP2 458 aa13.89□□□□□ -0.19
CDH4-203ENST00000614565 TAB3Q8N5C8 712 aaPredicted RBP13.89□□□□□ -0.19
CDH4-203ENST00000614565 SPDYE1Q8NFV5 336 aaPredicted RBP13.89□□□□□ -0.19
CDH4-203ENST00000614565 IPO4Q8TEX9 1081 aaKnown RBP13.89□□□□□ -0.19
CDH4-203ENST00000614565 DHX36Q9H2U1 1008 aaKnown RBP13.89□□□□□ -0.19
CDH4-203ENST00000614565 PCDHA12Q9UN75 941 aa13.89□□□□□ -0.19
CDH4-203ENST00000614565 TTC41PQ6P2S7 1318 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 NEURL4Q96JN8 1562 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 HECW2Q9P2P5 1572 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 BICDL2A1A5D9 508 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 CETPP11597 493 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 PDE6AP16499 860 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 TTLL4Q14679 1199 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 PPP1R7Q15435 360 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 DEFB115Q30KQ5 88 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 SNX19Q92543 992 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 NEMFO60524 1076 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 CACNB2Q08289 660 aaPredicted RBP13.88□□□□□ -0.19
CDH4-203ENST00000614565 BFSP1Q12934 665 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 MAATS1Q7Z4T9 603 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 TEX2Q8IWB9 1127 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 ANKRD36BP1Q96IX9 119 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 DDX19AQ9NUU7 478 aaKnown RBP13.88□□□□□ -0.19
CDH4-203ENST00000614565 NXF1Q9UBU9 619 aaKnown RBP13.88□□□□□ -0.19
CDH4-203ENST00000614565 KDM4FA0A1W2PPD8 638 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 MAP3K13O43283 966 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 PDE8BO95263 885 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 MAN1A1P33908 653 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 RNF139Q8WU17 664 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 CCDC17Q96LX7 622 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 SOS1Q07889 1333 aaPredicted RBP13.88□□□□□ -0.19
CDH4-203ENST00000614565 MEIS1O00470 390 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 KARSQ15046 597 aaKnown RBP13.88□□□□□ -0.19
CDH4-203ENST00000614565 SCARA5Q6ZMJ2 495 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 ZNF654Q8IZM8 581 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 YME1L1Q96TA2 773 aa13.88□□□□□ -0.19
CDH4-203ENST00000614565 PRR23AA6NEV1 266 aa13.87□□□□□ -0.19
CDH4-203ENST00000614565 DCDC2CA8MYV0 355 aa13.87□□□□□ -0.19
CDH4-203ENST00000614565 RNF180Q86T96 592 aa13.87□□□□□ -0.19
CDH4-203ENST00000614565 ZNF513Q8N8E2 541 aaPredicted RBP13.87□□□□□ -0.19
CDH4-203ENST00000614565 CELF1Q92879 486 aaKnown RBP13.87□□□□□ -0.19
CDH4-203ENST00000614565 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.87□□□□□ -0.19
CDH4-203ENST00000614565 AXIN2Q9Y2T1 843 aa13.87□□□□□ -0.19
CDH4-203ENST00000614565 POLR3GO15318 223 aaPredicted RBP13.87□□□□□ -0.19
CDH4-203ENST00000614565 RAG1P15918 1043 aa13.87□□□□□ -0.19
CDH4-203ENST00000614565 LINC00116Q8NCU8 138 aa13.87□□□□□ -0.19
CDH4-203ENST00000614565 BRIP1Q9BX63 1249 aa13.87□□□□□ -0.19
CDH4-203ENST00000614565 NAA15Q9BXJ9 866 aaKnown RBP13.87□□□□□ -0.19
CDH4-203ENST00000614565 MROH2AA6NES4 1674 aa13.87□□□□□ -0.19
CDH4-203ENST00000614565 GIPC1O14908 333 aa13.87□□□□□ -0.19
CDH4-203ENST00000614565 TMEM87BQ96K49 555 aa13.87□□□□□ -0.19
CDH4-203ENST00000614565 GLI2P10070 1586 aa13.87□□□□□ -0.19
CDH4-203ENST00000614565 ARHGAP31Q2M1Z3 1444 aa13.87□□□□□ -0.19
CDH4-203ENST00000614565 HNRNPDLO14979 420 aaKnown RBP13.87□□□□□ -0.19
CDH4-203ENST00000614565 LACTBP83111 547 aaPredicted RBP13.87□□□□□ -0.19
CDH4-203ENST00000614565 STXBP2Q15833 593 aa13.87□□□□□ -0.19
CDH4-203ENST00000614565 UBE2SQ16763 222 aa13.87□□□□□ -0.19
CDH4-203ENST00000614565 THEM5Q8N1Q8 247 aa13.87□□□□□ -0.19
CDH4-203ENST00000614565 CLGNO14967 610 aa13.87□□□□□ -0.19
CDH4-203ENST00000614565 ZBTB7BO15156 539 aaPredicted RBP13.87□□□□□ -0.19
CDH4-203ENST00000614565 ITM2BQ9Y287 266 aa13.87□□□□□ -0.19
CDH4-203ENST00000614565 RGL2O15211 777 aa13.86□□□□□ -0.19
CDH4-203ENST00000614565 FBXW4P57775 412 aa13.86□□□□□ -0.19
CDH4-203ENST00000614565 GNASQ5JWF2 1037 aa13.86□□□□□ -0.19
CDH4-203ENST00000614565 COL23A1Q86Y22 540 aaPredicted RBP13.86□□□□□ -0.19
CDH4-203ENST00000614565 EXOC8Q8IYI6 725 aa13.86□□□□□ -0.19
CDH4-203ENST00000614565 CCDC89Q8N998 374 aa13.86□□□□□ -0.19
CDH4-203ENST00000614565 C16orf45Q96MC5 204 aaPredicted RBP13.86□□□□□ -0.19
CDH4-203ENST00000614565 ADCY1Q08828 1119 aa13.86□□□□□ -0.19
CDH4-203ENST00000614565 ADAT2Q7Z6V5 191 aaKnown RBP13.86□□□□□ -0.19
CDH4-203ENST00000614565 PHLDB2Q86SQ0 1253 aa13.86□□□□□ -0.19
CDH4-203ENST00000614565 ATP6V0A1Q93050 837 aa13.86□□□□□ -0.19
CDH4-203ENST00000614565 SEC62Q99442 399 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms