RNA–Protein interactions for RNA: ENST00000613121.1

IGHV3-41-201, Transcript of immunoglobulin heavy variable 3-41 (pseudogene), humanhuman

BASIC

Gene IGHV3-41, Length 348 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-41-201ENST00000613121 HMGB1P09429 215 aaKnown RBP21.02■□□□□ 0.96
IGHV3-41-201ENST00000613121 CALML3P27482 149 aa21.02■□□□□ 0.96
IGHV3-41-201ENST00000613121 KIF5BP33176 963 aa21.02■□□□□ 0.96
IGHV3-41-201ENST00000613121 LIFRP42702 1097 aa21.02■□□□□ 0.96
IGHV3-41-201ENST00000613121 FGD1P98174 961 aa21.02■□□□□ 0.96
IGHV3-41-201ENST00000613121 MAMDC4Q6UXC1 1216 aa21.02■□□□□ 0.96
IGHV3-41-201ENST00000613121 RNF207Q6ZRF8 634 aa21.02■□□□□ 0.96
IGHV3-41-201ENST00000613121 HOMER1Q86YM7 354 aa21.02■□□□□ 0.96
IGHV3-41-201ENST00000613121 FAM133AQ8N9E0 248 aa21.02■□□□□ 0.96
IGHV3-41-201ENST00000613121 MYL10Q9BUA6 226 aa21.02■□□□□ 0.96
IGHV3-41-201ENST00000613121 HTATIP2Q9BUP3 242 aa21.02■□□□□ 0.96
IGHV3-41-201ENST00000613121 ZHX1Q9UKY1 873 aaPredicted RBP21.02■□□□□ 0.96
IGHV3-41-201ENST00000613121 SOWAHBA6NEL2 793 aa21.01■□□□□ 0.95
IGHV3-41-201ENST00000613121 ASB14A6NK59 587 aa21.01■□□□□ 0.95
IGHV3-41-201ENST00000613121 DDAH1O94760 285 aa21.01■□□□□ 0.95
IGHV3-41-201ENST00000613121 SNAI1O95863 264 aaPredicted RBP21.01■□□□□ 0.95
IGHV3-41-201ENST00000613121 HSPA4P34932 840 aa21.01■□□□□ 0.95
IGHV3-41-201ENST00000613121 ADCK5Q3MIX3 580 aa21.01■□□□□ 0.95
IGHV3-41-201ENST00000613121 CLEC4DQ8WXI8 215 aa21.01■□□□□ 0.95
IGHV3-41-201ENST00000613121 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.01■□□□□ 0.95
IGHV3-41-201ENST00000613121 MRPL11Q9Y3B7 192 aaKnown RBP21.01■□□□□ 0.95
IGHV3-41-201ENST00000613121 PLXNB2O15031 1838 aa21.01■□□□□ 0.95
IGHV3-41-201ENST00000613121 ABCB11O95342 1321 aa21.01■□□□□ 0.95
IGHV3-41-201ENST00000613121 SYNGAP1Q96PV0 1343 aa21.01■□□□□ 0.95
IGHV3-41-201ENST00000613121 LAMA4Q16363 1823 aa21■□□□□ 0.95
IGHV3-41-201ENST00000613121 CALM1P0DP23 149 aa21■□□□□ 0.95
IGHV3-41-201ENST00000613121 CALM2P0DP24 149 aa21■□□□□ 0.95
IGHV3-41-201ENST00000613121 CALM3P0DP25 149 aa21■□□□□ 0.95
IGHV3-41-201ENST00000613121 ACVR2BQ13705 512 aa21■□□□□ 0.95
IGHV3-41-201ENST00000613121 COL9A3Q14050 684 aaPredicted RBP21■□□□□ 0.95
IGHV3-41-201ENST00000613121 ARMCX2Q7L311 632 aa21■□□□□ 0.95
IGHV3-41-201ENST00000613121 CCDC144CPQ8IYA2 1237 aa21■□□□□ 0.95
IGHV3-41-201ENST00000613121 ARRDC4Q8NCT1 418 aa21■□□□□ 0.95
IGHV3-41-201ENST00000613121 DIS3LQ8TF46 1054 aaKnown RBP21■□□□□ 0.95
IGHV3-41-201ENST00000613121 PIBF1Q8WXW3 757 aa21■□□□□ 0.95
IGHV3-41-201ENST00000613121 TCEANC2Q96MN5 208 aa21■□□□□ 0.95
IGHV3-41-201ENST00000613121 JAKMIP1Q96N16 626 aaKnown RBP21■□□□□ 0.95
IGHV3-41-201ENST00000613121 AMNQ9BXJ7 453 aa21■□□□□ 0.95
IGHV3-41-201ENST00000613121 ADD3Q9UEY8 706 aaKnown RBP21■□□□□ 0.95
IGHV3-41-201ENST00000613121 FAM184BQ9ULE4 1060 aa21■□□□□ 0.95
IGHV3-41-201ENST00000613121 ZBTB5O15062 677 aa20.99■□□□□ 0.95
IGHV3-41-201ENST00000613121 ZNF865P0CJ78 1059 aaPredicted RBP20.99■□□□□ 0.95
IGHV3-41-201ENST00000613121 RARBP10826 455 aa20.99■□□□□ 0.95
IGHV3-41-201ENST00000613121 AKR1A1P14550 325 aa20.99■□□□□ 0.95
IGHV3-41-201ENST00000613121 GNAQP50148 359 aa20.99■□□□□ 0.95
IGHV3-41-201ENST00000613121 EXOSC10Q01780 885 aaKnown RBP20.99■□□□□ 0.95
IGHV3-41-201ENST00000613121 MCF2L2Q86YR7 1114 aa20.99■□□□□ 0.95
IGHV3-41-201ENST00000613121 PURBQ96QR8 312 aaKnown RBP20.99■□□□□ 0.95
IGHV3-41-201ENST00000613121 PIGSQ96S52 555 aa20.99■□□□□ 0.95
IGHV3-41-201ENST00000613121 MAP3K14Q99558 947 aa20.99■□□□□ 0.95
IGHV3-41-201ENST00000613121 ABHD16BQ9H3Z7 469 aa20.99■□□□□ 0.95
IGHV3-41-201ENST00000613121 C11orf49Q9H6J7 331 aa20.99■□□□□ 0.95
IGHV3-41-201ENST00000613121 SNX14Q9Y5W7 946 aa20.99■□□□□ 0.95
IGHV3-41-201ENST00000613121 CENPFP49454 3210 aa20.99■□□□□ 0.95
IGHV3-41-201ENST00000613121 RXRAP19793 462 aa20.98■□□□□ 0.95
IGHV3-41-201ENST00000613121 RPS6P62753 249 aaKnown RBP20.98■□□□□ 0.95
IGHV3-41-201ENST00000613121 TRAF1Q13077 416 aa20.98■□□□□ 0.95
IGHV3-41-201ENST00000613121 UBE2Q1Q7Z7E8 422 aa20.98■□□□□ 0.95
IGHV3-41-201ENST00000613121 RAB11FIP4Q86YS3 637 aa20.98■□□□□ 0.95
IGHV3-41-201ENST00000613121 FGD4Q96M96 766 aa20.98■□□□□ 0.95
IGHV3-41-201ENST00000613121 MPHOSPH6Q99547 160 aaKnown RBP20.98■□□□□ 0.95
IGHV3-41-201ENST00000613121 LZTS2Q9BRK4 669 aa20.98■□□□□ 0.95
IGHV3-41-201ENST00000613121 RIOX1Q9H6W3 641 aa20.98■□□□□ 0.95
IGHV3-41-201ENST00000613121 NAP1L2Q9ULW6 460 aaPredicted RBP20.98■□□□□ 0.95
IGHV3-41-201ENST00000613121 PCDHA1Q9Y5I3 950 aa20.98■□□□□ 0.95
IGHV3-41-201ENST00000613121 PSMA5P28066 241 aa20.97■□□□□ 0.95
IGHV3-41-201ENST00000613121 GJC2Q5T442 439 aaPredicted RBP20.97■□□□□ 0.95
IGHV3-41-201ENST00000613121 BLOC1S2Q6QNY1 142 aa20.97■□□□□ 0.95
IGHV3-41-201ENST00000613121 RGS22Q8NE09 1264 aa20.97■□□□□ 0.95
IGHV3-41-201ENST00000613121 KCNB2Q92953 911 aa20.97■□□□□ 0.95
IGHV3-41-201ENST00000613121 B4DLN1 442 aa20.96■□□□□ 0.95
IGHV3-41-201ENST00000613121 EPB41L2O43491 1005 aaKnown RBP20.96■□□□□ 0.95
IGHV3-41-201ENST00000613121 CPA1P15085 419 aa20.96■□□□□ 0.95
IGHV3-41-201ENST00000613121 MRPL12P52815 198 aaKnown RBP20.96■□□□□ 0.95
IGHV3-41-201ENST00000613121 SLC30A10Q6XR72 485 aa20.96■□□□□ 0.95
IGHV3-41-201ENST00000613121 NOL8Q76FK4 1167 aaKnown RBP20.96■□□□□ 0.95
IGHV3-41-201ENST00000613121 EEPD1Q7L9B9 569 aa20.96■□□□□ 0.95
IGHV3-41-201ENST00000613121 FANCBQ8NB91 859 aa20.96■□□□□ 0.95
IGHV3-41-201ENST00000613121 TBC1D5Q92609 795 aa20.96■□□□□ 0.95
IGHV3-41-201ENST00000613121 MTMR8Q96EF0 704 aa20.96■□□□□ 0.95
IGHV3-41-201ENST00000613121 RRP36Q96EU6 259 aaKnown RBP20.96■□□□□ 0.95
IGHV3-41-201ENST00000613121 USP26Q9BXU7 913 aa20.96■□□□□ 0.95
IGHV3-41-201ENST00000613121 XPNPEP3Q9NQH7 507 aa20.96■□□□□ 0.95
IGHV3-41-201ENST00000613121 PARP14Q460N5 1801 aa20.96■□□□□ 0.95
IGHV3-41-201ENST00000613121 COL11A1P12107 1806 aaPredicted RBP20.95■□□□□ 0.94
IGHV3-41-201ENST00000613121 PNMA6FA0A0J9YX94 578 aa20.95■□□□□ 0.94
IGHV3-41-201ENST00000613121 KBTBD13C9JR72 458 aa20.95■□□□□ 0.94
IGHV3-41-201ENST00000613121 CYTH3O43739 400 aa20.95■□□□□ 0.94
IGHV3-41-201ENST00000613121 MNX1P50219 401 aaPredicted RBP20.95■□□□□ 0.94
IGHV3-41-201ENST00000613121 ALDH5A1P51649 535 aaPredicted RBP20.95■□□□□ 0.94
IGHV3-41-201ENST00000613121 CCDC144BQ3MJ40 725 aa20.95■□□□□ 0.94
IGHV3-41-201ENST00000613121 SGMS1Q86VZ5 419 aa20.95■□□□□ 0.94
IGHV3-41-201ENST00000613121 MICU3Q86XE3 530 aa20.95■□□□□ 0.94
IGHV3-41-201ENST00000613121 CCDC82Q8N4S0 544 aa20.95■□□□□ 0.94
IGHV3-41-201ENST00000613121 SENP6Q9GZR1 1112 aaPredicted RBP20.95■□□□□ 0.94
IGHV3-41-201ENST00000613121 DNM1LO00429 736 aa20.94■□□□□ 0.94
IGHV3-41-201ENST00000613121 CFBP00751 764 aa20.94■□□□□ 0.94
IGHV3-41-201ENST00000613121 SMARCA1P28370 1054 aa20.94■□□□□ 0.94
IGHV3-41-201ENST00000613121 Q6ZUG5 572 aa20.94■□□□□ 0.94
IGHV3-41-201ENST00000613121 RNF180Q86T96 592 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms