RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 KREMEN2Q8NCW0 462 aa6.88□□□□□ -1.31
LINC00397-202ENST00000606785 CCDC136Q96JN2 1154 aa6.88□□□□□ -1.31
LINC00397-202ENST00000606785 C8orf48Q96LL4 319 aa6.88□□□□□ -1.31
LINC00397-202ENST00000606785 CHST7Q9NS84 486 aa6.88□□□□□ -1.31
LINC00397-202ENST00000606785 USP21Q9UK80 565 aa6.88□□□□□ -1.31
LINC00397-202ENST00000606785 TRAF6Q9Y4K3 522 aa6.88□□□□□ -1.31
LINC00397-202ENST00000606785 ASXL2Q76L83 1435 aa6.87□□□□□ -1.31
LINC00397-202ENST00000606785 H0Y8X5 98 aa6.87□□□□□ -1.31
LINC00397-202ENST00000606785 NAT1P18440 290 aa6.87□□□□□ -1.31
LINC00397-202ENST00000606785 POU4F1Q01851 419 aa6.87□□□□□ -1.31
LINC00397-202ENST00000606785 SCRN1Q12765 414 aa6.87□□□□□ -1.31
LINC00397-202ENST00000606785 CDK5R2Q13319 367 aa6.87□□□□□ -1.31
LINC00397-202ENST00000606785 DPY19L1Q2PZI1 675 aa6.87□□□□□ -1.31
LINC00397-202ENST00000606785 CDCA2Q69YH5 1023 aaPredicted RBP6.87□□□□□ -1.31
LINC00397-202ENST00000606785 MCTP1Q6DN14 999 aa6.87□□□□□ -1.31
LINC00397-202ENST00000606785 DENND5AQ6IQ26 1287 aa6.87□□□□□ -1.31
LINC00397-202ENST00000606785 ZCCHC8Q6NZY4 707 aaKnown RBP6.87□□□□□ -1.31
LINC00397-202ENST00000606785 LHFPL2Q6ZUX7 228 aa6.87□□□□□ -1.31
LINC00397-202ENST00000606785 ANKLE2Q86XL3 938 aa6.87□□□□□ -1.31
LINC00397-202ENST00000606785 DTWD2Q8NBA8 298 aa6.87□□□□□ -1.31
LINC00397-202ENST00000606785 UBL7Q96S82 380 aaPredicted RBP6.87□□□□□ -1.31
LINC00397-202ENST00000606785 TTC1Q99614 292 aa6.87□□□□□ -1.31
LINC00397-202ENST00000606785 ORAI3Q9BRQ5 295 aa6.87□□□□□ -1.31
LINC00397-202ENST00000606785 KCNH3Q9ULD8 1083 aa6.87□□□□□ -1.31
LINC00397-202ENST00000606785 CNTNAP4Q9C0A0 1308 aa6.86□□□□□ -1.31
LINC00397-202ENST00000606785 PRAMEF1O95521 474 aa6.86□□□□□ -1.31
LINC00397-202ENST00000606785 GSNP06396 782 aa6.86□□□□□ -1.31
LINC00397-202ENST00000606785 KIR3DL1P43629 444 aa6.86□□□□□ -1.31
LINC00397-202ENST00000606785 TBX4P57082 545 aa6.86□□□□□ -1.31
LINC00397-202ENST00000606785 NRG1Q02297 640 aaPredicted RBP6.86□□□□□ -1.31
LINC00397-202ENST00000606785 MCL1Q07820 350 aa6.86□□□□□ -1.31
LINC00397-202ENST00000606785 NMIQ13287 307 aaPredicted RBP6.86□□□□□ -1.31
LINC00397-202ENST00000606785 MTMR1Q13613 665 aa6.86□□□□□ -1.31
LINC00397-202ENST00000606785 SPATS2Q86XZ4 545 aaKnown RBP6.86□□□□□ -1.31
LINC00397-202ENST00000606785 OR2W6PQ8NHA6 318 aa6.86□□□□□ -1.31
LINC00397-202ENST00000606785 COPS5Q92905 334 aa6.86□□□□□ -1.31
LINC00397-202ENST00000606785 USP7Q93009 1102 aa6.86□□□□□ -1.31
LINC00397-202ENST00000606785 RELTQ969Z4 430 aa6.86□□□□□ -1.31
LINC00397-202ENST00000606785 Q96M66 194 aa6.86□□□□□ -1.31
LINC00397-202ENST00000606785 ZFYVE21Q9BQ24 234 aa6.86□□□□□ -1.31
LINC00397-202ENST00000606785 DUSP23Q9BVJ7 150 aa6.86□□□□□ -1.31
LINC00397-202ENST00000606785 PUS7LQ9H0K6 701 aaKnown RBP6.86□□□□□ -1.31
LINC00397-202ENST00000606785 ASCC2Q9H1I8 757 aaPredicted RBP6.86□□□□□ -1.31
LINC00397-202ENST00000606785 PRDM5Q9NQX1 630 aaPredicted RBP6.86□□□□□ -1.31
LINC00397-202ENST00000606785 C1GALT1Q9NS00 363 aa6.86□□□□□ -1.31
LINC00397-202ENST00000606785 GABBR1Q9UBS5 961 aa6.86□□□□□ -1.31
LINC00397-202ENST00000606785 RNF112Q9ULX5 631 aa6.86□□□□□ -1.31
LINC00397-202ENST00000606785 PCDHA9Q9Y5H5 950 aa6.86□□□□□ -1.31
LINC00397-202ENST00000606785 ST14Q9Y5Y6 855 aa6.86□□□□□ -1.31
LINC00397-202ENST00000606785 FAM95CA0A1B0GW59 222 aa6.85□□□□□ -1.31
LINC00397-202ENST00000606785 TSPAN6O43657 245 aa6.85□□□□□ -1.31
LINC00397-202ENST00000606785 ZEB2O60315 1214 aa6.85□□□□□ -1.31
LINC00397-202ENST00000606785 MAP4K4O95819 1239 aaPredicted RBP6.85□□□□□ -1.31
LINC00397-202ENST00000606785 BPIP17213 487 aa6.85□□□□□ -1.31
LINC00397-202ENST00000606785 MAP4P27816 1152 aaKnown RBP6.85□□□□□ -1.31
LINC00397-202ENST00000606785 RXRBP28702 533 aa6.85□□□□□ -1.31
LINC00397-202ENST00000606785 SCNN1BP51168 640 aa6.85□□□□□ -1.31
LINC00397-202ENST00000606785 GUCY1A3Q02108 690 aa6.85□□□□□ -1.31
LINC00397-202ENST00000606785 ITKQ08881 620 aa6.85□□□□□ -1.31
LINC00397-202ENST00000606785 SFRP5Q5T4F7 317 aa6.85□□□□□ -1.31
LINC00397-202ENST00000606785 ACBD5Q5T8D3 534 aaPredicted RBP6.85□□□□□ -1.31
LINC00397-202ENST00000606785 PIK3R6Q5UE93 754 aa6.85□□□□□ -1.31
LINC00397-202ENST00000606785 CWF19L1Q69YN2 538 aaKnown RBP6.85□□□□□ -1.31
LINC00397-202ENST00000606785 KCNT2Q6UVM3 1135 aa6.85□□□□□ -1.31
LINC00397-202ENST00000606785 RSPO2Q6UXX9 243 aaPredicted RBP6.85□□□□□ -1.31
LINC00397-202ENST00000606785 KIF18BQ86Y91 864 aa6.85□□□□□ -1.31
LINC00397-202ENST00000606785 PPIL6Q8IXY8 311 aa6.85□□□□□ -1.31
LINC00397-202ENST00000606785 GIMAP7Q8NHV1 300 aa6.85□□□□□ -1.31
LINC00397-202ENST00000606785 PI4K2BQ8TCG2 481 aa6.85□□□□□ -1.31
LINC00397-202ENST00000606785 TSR2Q969E8 191 aaKnown RBP6.85□□□□□ -1.31
LINC00397-202ENST00000606785 WNK4Q96J92 1243 aa6.85□□□□□ -1.31
LINC00397-202ENST00000606785 MYRFLQ96LU7 910 aa6.85□□□□□ -1.31
LINC00397-202ENST00000606785 MCMBPQ9BTE3 642 aa6.85□□□□□ -1.31
LINC00397-202ENST00000606785 IFT22Q9H7X7 185 aa6.85□□□□□ -1.31
LINC00397-202ENST00000606785 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.85□□□□□ -1.31
LINC00397-202ENST00000606785 MINPP1Q9UNW1 487 aa6.85□□□□□ -1.31
LINC00397-202ENST00000606785 C9orf172C9J069 976 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 STXBP3O00186 592 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 MEIS1O00470 390 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 AURKAO14965 403 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 PRC1O43663 620 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 THBDP07204 575 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 CD3EP07766 207 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 BMP3P12645 472 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 KCNA6P17658 529 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 NOS3P29474 1203 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 CTSKP43235 329 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 NEK2P51955 445 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 ADGRE1Q14246 886 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 PPP2R5AQ15172 486 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 TESK1Q15569 626 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 DDX53Q86TM3 631 aaKnown RBP6.84□□□□□ -1.31
LINC00397-202ENST00000606785 MTDHQ86UE4 582 aaKnown RBP6.84□□□□□ -1.31
LINC00397-202ENST00000606785 NPLOC4Q8TAT6 608 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 ENOX1Q8TC92 643 aaKnown RBP6.84□□□□□ -1.31
LINC00397-202ENST00000606785 FRS2Q8WU20 508 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 WFDC12Q8WWY7 111 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 UTP4Q969X6 686 aaKnown RBP6.84□□□□□ -1.31
LINC00397-202ENST00000606785 MTMR8Q96EF0 704 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 PHF20Q9BVI0 1012 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms