RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 MAN1A1P33908 653 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 MAP4K1Q92918 833 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 PHKBQ93100 1093 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 SEC31BQ9NQW1 1179 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 SPATA31A1Q5TZJ5 1347 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 E9PCH4 1651 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 ZBBXA8MT70 800 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 POLA2Q14181 598 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 GOLGA5Q8TBA6 731 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 MYL10Q9BUA6 226 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 GOLGA8CPA6NN73 597 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 GNA14O95837 355 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 PODNQ7Z5L7 613 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 MAPK8IP1Q9UQF2 711 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 M0R2C6 588 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 KRT10P13645 584 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 PTPN12Q05209 780 aaKnown RBP12.13□□□□□ -0.47
SHANK2-219ENST00000606715 PLA2G4DQ86XP0 818 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 BBS5Q8N3I7 341 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 SLITRK6Q9H5Y7 841 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 ATP5DP30049 168 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 LRMPQ12912 555 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 DMP1Q13316 513 aaPredicted RBP12.13□□□□□ -0.47
SHANK2-219ENST00000606715 RC3H1Q5TC82 1133 aaKnown RBP12.13□□□□□ -0.47
SHANK2-219ENST00000606715 NEK8Q86SG6 692 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 RPUSD2Q8IZ73 545 aaKnown RBP12.13□□□□□ -0.47
SHANK2-219ENST00000606715 EDC3Q96F86 508 aaKnown RBP12.13□□□□□ -0.47
SHANK2-219ENST00000606715 MIS12Q9H081 205 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 SRP68Q9UHB9 627 aaKnown RBP12.13□□□□□ -0.47
SHANK2-219ENST00000606715 ZNF215Q9UL58 517 aaPredicted RBP12.13□□□□□ -0.47
SHANK2-219ENST00000606715 PTPRUQ92729 1446 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 PIK3C2BO00750 1634 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 IQCA1LA6NCM1 817 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 LAD1O00515 517 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 PAK1Q13153 545 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 NOSTRINQ8IVI9 506 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 ARHGEF37A1IGU5 675 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 TRAPPC10P48553 1259 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 MAP7Q14244 749 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 LGSNQ5TDP6 509 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 SLC17A8Q8NDX2 589 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 UBLCP1Q8WVY7 318 aaPredicted RBP12.13□□□□□ -0.47
SHANK2-219ENST00000606715 CCDC68Q9H2F9 335 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 LZTFL1Q9NQ48 299 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 VPS54Q9P1Q0 977 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 ANKFY1Q9P2R3 1169 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 CPS1P31327 1500 aa12.13□□□□□ -0.47
SHANK2-219ENST00000606715 POLR2DO15514 142 aaKnown RBP12.12□□□□□ -0.47
SHANK2-219ENST00000606715 ADORA1P30542 326 aa12.12□□□□□ -0.47
SHANK2-219ENST00000606715 VAV2P52735 878 aa12.12□□□□□ -0.47
SHANK2-219ENST00000606715 EN1Q05925 392 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-219ENST00000606715 SETDB1Q15047 1291 aa12.12□□□□□ -0.47
SHANK2-219ENST00000606715 CCDC122Q5T0U0 273 aa12.12□□□□□ -0.47
SHANK2-219ENST00000606715 POLIQ9UNA4 740 aa12.12□□□□□ -0.47
SHANK2-219ENST00000606715 AXIN2Q9Y2T1 843 aa12.12□□□□□ -0.47
SHANK2-219ENST00000606715 ADCY9O60503 1353 aa12.12□□□□□ -0.47
SHANK2-219ENST00000606715 K7ENM7 598 aa12.12□□□□□ -0.47
SHANK2-219ENST00000606715 STAM2O75886 525 aa12.12□□□□□ -0.47
SHANK2-219ENST00000606715 CYP2J2P51589 502 aa12.12□□□□□ -0.47
SHANK2-219ENST00000606715 ARHGAP44Q17R89 818 aa12.12□□□□□ -0.47
SHANK2-219ENST00000606715 CDHR1Q96JP9 859 aa12.12□□□□□ -0.47
SHANK2-219ENST00000606715 MAGEF1Q9HAY2 307 aa12.12□□□□□ -0.47
SHANK2-219ENST00000606715 ACTN4O43707 911 aaKnown RBP12.12□□□□□ -0.47
SHANK2-219ENST00000606715 CYP19A1P11511 503 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-219ENST00000606715 SLC16A10Q8TF71 515 aa12.12□□□□□ -0.47
SHANK2-219ENST00000606715 NACC1Q96RE7 527 aa12.12□□□□□ -0.47
SHANK2-219ENST00000606715 RNF26Q9BY78 433 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-219ENST00000606715 NUCKS1Q9H1E3 243 aaKnown RBP12.12□□□□□ -0.47
SHANK2-219ENST00000606715 MYO1AQ9UBC5 1043 aa12.12□□□□□ -0.47
SHANK2-219ENST00000606715 SYNJ2BP-COX16A0A087WUM0 186 aa12.12□□□□□ -0.47
SHANK2-219ENST00000606715 TUBBP07437 444 aa12.12□□□□□ -0.47
SHANK2-219ENST00000606715 TRIM28Q13263 835 aaKnown RBP12.12□□□□□ -0.47
SHANK2-219ENST00000606715 KARSQ15046 597 aaKnown RBP12.12□□□□□ -0.47
SHANK2-219ENST00000606715 MYSM1Q5VVJ2 828 aa12.12□□□□□ -0.47
SHANK2-219ENST00000606715 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-219ENST00000606715 CCDC84Q86UT8 332 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-219ENST00000606715 FAM160B2Q86V87 743 aa12.12□□□□□ -0.47
SHANK2-219ENST00000606715 COA7Q96BR5 231 aa12.12□□□□□ -0.47
SHANK2-219ENST00000606715 VPS16Q9H269 839 aa12.12□□□□□ -0.47
SHANK2-219ENST00000606715 COX16Q9P0S2 106 aa12.12□□□□□ -0.47
SHANK2-219ENST00000606715 SEPT9Q9UHD8 586 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-219ENST00000606715 GSPT1P15170 499 aaKnown RBP12.11□□□□□ -0.47
SHANK2-219ENST00000606715 MTX1Q13505 466 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 CCDC186Q7Z3E2 898 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 PRIMPOLQ96LW4 560 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 SEPT10Q9P0V9 454 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 MADDQ8WXG6 1647 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 MYL3P08590 195 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 GCFC2P16383 781 aaKnown RBP12.11□□□□□ -0.47
SHANK2-219ENST00000606715 HS1BP3Q53T59 392 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 ODR4Q5SWX8 454 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 CHMP6Q96FZ7 201 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 PCDHA12Q9UN75 941 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 hCG_1642624A0A1W2PR95 340 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 PRAMEF22A3QJZ6 481 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 SPDYE2BA6NHP3 402 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 SPDYE6P0CI01 402 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 ABCD1P33897 745 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 SARNPP82979 210 aaKnown RBP12.11□□□□□ -0.47
SHANK2-219ENST00000606715 GPBP1Q86WP2 473 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms