RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 NPY5RQ15761 445 aa21.29■■□□□ 1
SSBP4-212ENST00000601919 CPXCR1Q8N123 301 aa21.29■■□□□ 1
SSBP4-212ENST00000601919 RAVER2Q9HCJ3 691 aaKnown RBP21.29■■□□□ 1
SSBP4-212ENST00000601919 CFAP45Q9UL16 551 aa21.29■■□□□ 1
SSBP4-212ENST00000601919 NOL7Q9UMY1 257 aaKnown RBP21.29■■□□□ 1
SSBP4-212ENST00000601919 ZNF536O15090 1300 aa21.29■■□□□ 1
SSBP4-212ENST00000601919 CCDC194A0A1B0GVG4 234 aa21.28■■□□□ 1
SSBP4-212ENST00000601919 TESPA1A2RU30 521 aaPredicted RBP21.28■■□□□ 1
SSBP4-212ENST00000601919 KIF28PB7ZC32 967 aa21.28■■□□□ 1
SSBP4-212ENST00000601919 GOLGA6L22H0YM25 854 aa21.28■■□□□ 1
SSBP4-212ENST00000601919 BAG4O95429 457 aaKnown RBP21.28■■□□□ 1
SSBP4-212ENST00000601919 NR5A1Q13285 461 aa21.28■■□□□ 1
SSBP4-212ENST00000601919 TKFCQ3LXA3 575 aa21.28■■□□□ 1
SSBP4-212ENST00000601919 KRT25Q7Z3Z0 450 aa21.28■■□□□ 1
SSBP4-212ENST00000601919 MCF2L2Q86YR7 1114 aa21.28■■□□□ 1
SSBP4-212ENST00000601919 SAMD3Q8N6K7 520 aa21.28■■□□□ 1
SSBP4-212ENST00000601919 OXER1Q8TDS5 423 aa21.28■■□□□ 1
SSBP4-212ENST00000601919 BRI3BPQ8WY22 251 aa21.28■■□□□ 1
SSBP4-212ENST00000601919 P2RX7Q99572 595 aaKnown RBP21.28■■□□□ 1
SSBP4-212ENST00000601919 TEX13BQ9BXU2 312 aa21.28■■□□□ 1
SSBP4-212ENST00000601919 ZCCHC17Q9NP64 241 aaKnown RBP21.28■■□□□ 1
SSBP4-212ENST00000601919 A0A0G2JMZ2 1700 aa21.28■■□□□ 1
SSBP4-212ENST00000601919 TCHHQ07283 1943 aa21.27■■□□□ 1
SSBP4-212ENST00000601919 PDHXO00330 501 aa21.27■■□□□ 1
SSBP4-212ENST00000601919 HERVK_113P62684 666 aa21.27■■□□□ 1
SSBP4-212ENST00000601919 CSPP1Q1MSJ5 1256 aa21.27■■□□□ 1
SSBP4-212ENST00000601919 RILPL1Q5EBL4 403 aa21.27■■□□□ 1
SSBP4-212ENST00000601919 MYSM1Q5VVJ2 828 aa21.27■■□□□ 1
SSBP4-212ENST00000601919 REPS2Q8NFH8 660 aa21.27■■□□□ 1
SSBP4-212ENST00000601919 AGBL1Q96MI9 1066 aa21.27■■□□□ 1
SSBP4-212ENST00000601919 MAF1Q9H063 256 aa21.27■■□□□ 1
SSBP4-212ENST00000601919 CREBZFQ9NS37 354 aa21.27■■□□□ 1
SSBP4-212ENST00000601919 BTBD19C9JJ37 291 aa21.26■□□□□ 0.99
SSBP4-212ENST00000601919 M0R2N6 131 aa21.26■□□□□ 0.99
SSBP4-212ENST00000601919 ALAS1P13196 640 aa21.26■□□□□ 0.99
SSBP4-212ENST00000601919 NCLP19338 710 aaKnown RBP21.26■□□□□ 0.99
SSBP4-212ENST00000601919 APLP1P51693 650 aa21.26■□□□□ 0.99
SSBP4-212ENST00000601919 SREBF2Q12772 1141 aa21.26■□□□□ 0.99
SSBP4-212ENST00000601919 FOXD4L6Q3SYB3 417 aaPredicted RBP21.26■□□□□ 0.99
SSBP4-212ENST00000601919 SNRNP48Q6IEG0 339 aaKnown RBP21.26■□□□□ 0.99
SSBP4-212ENST00000601919 FOXD4L3Q6VB84 417 aaPredicted RBP21.26■□□□□ 0.99
SSBP4-212ENST00000601919 TNFRSF25Q93038 417 aa21.26■□□□□ 0.99
SSBP4-212ENST00000601919 PARK7Q99497 189 aaKnown RBP21.26■□□□□ 0.99
SSBP4-212ENST00000601919 PCDHA6Q9UN73 950 aa21.26■□□□□ 0.99
SSBP4-212ENST00000601919 PCDHA8Q9Y5H6 950 aa21.26■□□□□ 0.99
SSBP4-212ENST00000601919 RBBP6Q7Z6E9 1792 aaKnown RBP21.25■□□□□ 0.99
SSBP4-212ENST00000601919 SMCHD1A6NHR9 2005 aa21.25■□□□□ 0.99
SSBP4-212ENST00000601919 PIK3CDO00329 1044 aa21.25■□□□□ 0.99
SSBP4-212ENST00000601919 FOSP01100 380 aaPredicted RBP21.25■□□□□ 0.99
SSBP4-212ENST00000601919 COPB2P35606 906 aa21.25■□□□□ 0.99
SSBP4-212ENST00000601919 STAT3P40763 770 aa21.25■□□□□ 0.99
SSBP4-212ENST00000601919 TRAPPC10P48553 1259 aa21.25■□□□□ 0.99
SSBP4-212ENST00000601919 DNM1Q05193 864 aaKnown RBP21.25■□□□□ 0.99
SSBP4-212ENST00000601919 AP3B2Q13367 1082 aa21.25■□□□□ 0.99
SSBP4-212ENST00000601919 PLS1Q14651 629 aa21.25■□□□□ 0.99
SSBP4-212ENST00000601919 TMEM132BQ14DG7 1078 aa21.25■□□□□ 0.99
SSBP4-212ENST00000601919 PAXIP1Q6ZW49 1069 aaPredicted RBP21.25■□□□□ 0.99
SSBP4-212ENST00000601919 SMCR8Q8TEV9 937 aaPredicted RBP21.25■□□□□ 0.99
SSBP4-212ENST00000601919 SCAND2PQ9GZW5 306 aaPredicted RBP21.25■□□□□ 0.99
SSBP4-212ENST00000601919 MAP3K20Q9NYL2 800 aaKnown RBP21.25■□□□□ 0.99
SSBP4-212ENST00000601919 ZNF214Q9UL59 606 aaPredicted RBP21.25■□□□□ 0.99
SSBP4-212ENST00000601919 RABGAP1Q9Y3P9 1069 aa21.25■□□□□ 0.99
SSBP4-212ENST00000601919 GCOM1H8Y6P7 765 aaPredicted RBP21.24■□□□□ 0.99
SSBP4-212ENST00000601919 POLR2MP0CAP2 368 aa21.24■□□□□ 0.99
SSBP4-212ENST00000601919 GCLCP48506 637 aaPredicted RBP21.24■□□□□ 0.99
SSBP4-212ENST00000601919 NONOQ15233 471 aaKnown RBP eCLIP21.24■□□□□ 0.99
SSBP4-212ENST00000601919 PIK3AP1Q6ZUJ8 805 aa21.24■□□□□ 0.99
SSBP4-212ENST00000601919 TRERF1Q96PN7 1200 aa21.24■□□□□ 0.99
SSBP4-212ENST00000601919 BIN2Q9UBW5 565 aaPredicted RBP21.24■□□□□ 0.99
SSBP4-212ENST00000601919 SPDYE3A6NKU9 549 aa21.23■□□□□ 0.99
SSBP4-212ENST00000601919 FAM155AB1AL88 458 aaPredicted RBP21.23■□□□□ 0.99
SSBP4-212ENST00000601919 CLK2P49760 499 aaKnown RBP21.23■□□□□ 0.99
SSBP4-212ENST00000601919 JAKMIP3Q5VZ66 844 aa21.23■□□□□ 0.99
SSBP4-212ENST00000601919 FAM173BQ6P4H8 233 aa21.23■□□□□ 0.99
SSBP4-212ENST00000601919 CHST13Q8NET6 341 aa21.23■□□□□ 0.99
SSBP4-212ENST00000601919 EHMT1Q9H9B1 1298 aa21.23■□□□□ 0.99
SSBP4-212ENST00000601919 RNF146Q9NTX7 359 aa21.23■□□□□ 0.99
SSBP4-212ENST00000601919 FBXO40Q9UH90 709 aa21.23■□□□□ 0.99
SSBP4-212ENST00000601919 MEIS2O14770 477 aa21.22■□□□□ 0.99
SSBP4-212ENST00000601919 SLC25A27O95847 323 aa21.22■□□□□ 0.99
SSBP4-212ENST00000601919 CFBP00751 764 aa21.22■□□□□ 0.99
SSBP4-212ENST00000601919 PTMSP20962 102 aa21.22■□□□□ 0.99
SSBP4-212ENST00000601919 DEFB115Q30KQ5 88 aa21.22■□□□□ 0.99
SSBP4-212ENST00000601919 RIOX2Q8IUF8 465 aa21.22■□□□□ 0.99
SSBP4-212ENST00000601919 REM2Q8IYK8 340 aaPredicted RBP21.22■□□□□ 0.99
SSBP4-212ENST00000601919 FAM43AQ8N2R8 423 aa21.22■□□□□ 0.99
SSBP4-212ENST00000601919 RASGRP4Q8TDF6 673 aa21.22■□□□□ 0.99
SSBP4-212ENST00000601919 PAGR1Q9BTK6 254 aa21.22■□□□□ 0.99
SSBP4-212ENST00000601919 SPATC1LQ9H0A9 340 aa21.22■□□□□ 0.99
SSBP4-212ENST00000601919 ACAD9Q9H845 621 aa21.22■□□□□ 0.99
SSBP4-212ENST00000601919 HOMER2Q9NSB8 354 aa21.22■□□□□ 0.99
SSBP4-212ENST00000601919 POLR3EQ9NVU0 708 aa21.22■□□□□ 0.99
SSBP4-212ENST00000601919 CEP131Q9UPN4 1083 aa21.22■□□□□ 0.99
SSBP4-212ENST00000601919 RASSF10A6NK89 507 aa21.21■□□□□ 0.99
SSBP4-212ENST00000601919 DDX11L8A8MPP1 907 aa21.21■□□□□ 0.99
SSBP4-212ENST00000601919 OPLAHO14841 1288 aa21.21■□□□□ 0.99
SSBP4-212ENST00000601919 BMP15O95972 392 aa21.21■□□□□ 0.99
SSBP4-212ENST00000601919 UBE2SQ16763 222 aa21.21■□□□□ 0.99
SSBP4-212ENST00000601919 USP17L6PQ6QN14 398 aa21.21■□□□□ 0.99
SSBP4-212ENST00000601919 CLEC4DQ8WXI8 215 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms