RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 PTPN18Q99952 460 aa25.32■■□□□ 1.64
SNRNP70-209ENST00000601065 CCPG1Q9ULG6 757 aa25.32■■□□□ 1.64
SNRNP70-209ENST00000601065 PDHXO00330 501 aa25.31■■□□□ 1.64
SNRNP70-209ENST00000601065 OAZ1P54368 228 aa25.31■■□□□ 1.64
SNRNP70-209ENST00000601065 HERVK_113P62684 666 aa25.31■■□□□ 1.64
SNRNP70-209ENST00000601065 TMEM132BQ14DG7 1078 aa25.31■■□□□ 1.64
SNRNP70-209ENST00000601065 BRAPQ7Z569 592 aa25.31■■□□□ 1.64
SNRNP70-209ENST00000601065 RIC8AQ9NPQ8 531 aa25.31■■□□□ 1.64
SNRNP70-209ENST00000601065 CREBZFQ9NS37 354 aa25.31■■□□□ 1.64
SNRNP70-209ENST00000601065 ZNF214Q9UL59 606 aaPredicted RBP25.31■■□□□ 1.64
SNRNP70-209ENST00000601065 MANSC4A6NHS7 340 aaPredicted RBP25.31■■□□□ 1.64
SNRNP70-209ENST00000601065 M0R2N6 131 aa25.31■■□□□ 1.64
SNRNP70-209ENST00000601065 ATP2A1O14983 1001 aa25.31■■□□□ 1.64
SNRNP70-209ENST00000601065 ADCY7P51828 1080 aa25.31■■□□□ 1.64
SNRNP70-209ENST00000601065 FAM173BQ6P4H8 233 aa25.31■■□□□ 1.64
SNRNP70-209ENST00000601065 NOSTRINQ8IVI9 506 aa25.31■■□□□ 1.64
SNRNP70-209ENST00000601065 FAM43AQ8N2R8 423 aa25.31■■□□□ 1.64
SNRNP70-209ENST00000601065 MB21D1Q8N884 522 aa25.31■■□□□ 1.64
SNRNP70-209ENST00000601065 TNFRSF25Q93038 417 aa25.31■■□□□ 1.64
SNRNP70-209ENST00000601065 PNMA3Q9UL41 463 aa25.31■■□□□ 1.64
SNRNP70-209ENST00000601065 PNMA2Q9UL42 364 aa25.31■■□□□ 1.64
SNRNP70-209ENST00000601065 ABCB11O95342 1321 aa25.31■■□□□ 1.64
SNRNP70-209ENST00000601065 CUL5Q93034 780 aa25.3■■□□□ 1.64
SNRNP70-209ENST00000601065 PSTPIP2Q9H939 334 aa25.3■■□□□ 1.64
SNRNP70-209ENST00000601065 OPLAHO14841 1288 aa25.29■■□□□ 1.64
SNRNP70-209ENST00000601065 BICD2Q8TD16 824 aa25.29■■□□□ 1.64
SNRNP70-209ENST00000601065 MRPL11Q9Y3B7 192 aaKnown RBP25.29■■□□□ 1.64
SNRNP70-209ENST00000601065 NBR1Q14596 966 aa25.28■■□□□ 1.64
SNRNP70-209ENST00000601065 GLT8D2Q9H1C3 349 aa25.28■■□□□ 1.64
SNRNP70-209ENST00000601065 PCDHA6Q9UN73 950 aa25.28■■□□□ 1.64
SNRNP70-209ENST00000601065 PCDHA8Q9Y5H6 950 aa25.28■■□□□ 1.64
SNRNP70-209ENST00000601065 CYP2C8P10632 490 aa25.28■■□□□ 1.64
SNRNP70-209ENST00000601065 MRPL12P52815 198 aaKnown RBP25.28■■□□□ 1.64
SNRNP70-209ENST00000601065 DNM1Q05193 864 aaKnown RBP25.28■■□□□ 1.64
SNRNP70-209ENST00000601065 RASGRP4Q8TDF6 673 aa25.28■■□□□ 1.64
SNRNP70-209ENST00000601065 TEX13BQ9BXU2 312 aa25.28■■□□□ 1.64
SNRNP70-209ENST00000601065 BTBD7Q9P203 1132 aa25.28■■□□□ 1.64
SNRNP70-209ENST00000601065 MYH15Q9Y2K3 1946 aa25.28■■□□□ 1.64
SNRNP70-209ENST00000601065 RASSF10A6NK89 507 aa25.27■■□□□ 1.64
SNRNP70-209ENST00000601065 ALAS1P13196 640 aa25.27■■□□□ 1.64
SNRNP70-209ENST00000601065 SNRNP48Q6IEG0 339 aaKnown RBP25.27■■□□□ 1.64
SNRNP70-209ENST00000601065 CYP4F22Q6NT55 531 aa25.27■■□□□ 1.64
SNRNP70-209ENST00000601065 PAXIP1Q6ZW49 1069 aaPredicted RBP25.27■■□□□ 1.64
SNRNP70-209ENST00000601065 REXO1Q8N1G1 1221 aaKnown RBP25.27■■□□□ 1.64
SNRNP70-209ENST00000601065 INHBEP58166 350 aa25.26■■□□□ 1.63
SNRNP70-209ENST00000601065 EARS2Q5JPH6 523 aaKnown RBP25.26■■□□□ 1.63
SNRNP70-209ENST00000601065 RIPK3Q9Y572 518 aa25.26■■□□□ 1.63
SNRNP70-209ENST00000601065 GOLGA6L22H0YM25 854 aa25.26■■□□□ 1.63
SNRNP70-209ENST00000601065 MEIS2O14770 477 aa25.26■■□□□ 1.63
SNRNP70-209ENST00000601065 STAT3P40763 770 aa25.26■■□□□ 1.63
SNRNP70-209ENST00000601065 CLK2P49760 499 aaKnown RBP25.26■■□□□ 1.63
SNRNP70-209ENST00000601065 UBE2SQ16763 222 aa25.26■■□□□ 1.63
SNRNP70-209ENST00000601065 DEFB115Q30KQ5 88 aa25.26■■□□□ 1.63
SNRNP70-209ENST00000601065 NOM1Q5C9Z4 860 aaKnown RBP25.26■■□□□ 1.63
SNRNP70-209ENST00000601065 MYSM1Q5VVJ2 828 aa25.26■■□□□ 1.63
SNRNP70-209ENST00000601065 CLEC4DQ8WXI8 215 aa25.26■■□□□ 1.63
SNRNP70-209ENST00000601065 BIN2Q9UBW5 565 aaPredicted RBP25.26■■□□□ 1.63
SNRNP70-209ENST00000601065 DDX11L8A8MPP1 907 aa25.25■■□□□ 1.63
SNRNP70-209ENST00000601065 IGF2BP3O00425 579 aaKnown RBP eCLIP25.25■■□□□ 1.63
SNRNP70-209ENST00000601065 PEX10O60683 326 aa25.25■■□□□ 1.63
SNRNP70-209ENST00000601065 CNMDO75829 334 aa25.25■■□□□ 1.63
SNRNP70-209ENST00000601065 NCLP19338 710 aaKnown RBP25.25■■□□□ 1.63
SNRNP70-209ENST00000601065 PLS1Q14651 629 aa25.25■■□□□ 1.63
SNRNP70-209ENST00000601065 USP17L6PQ6QN14 398 aa25.25■■□□□ 1.63
SNRNP70-209ENST00000601065 SMCR8Q8TEV9 937 aaPredicted RBP25.25■■□□□ 1.63
SNRNP70-209ENST00000601065 PAGR1Q9BTK6 254 aa25.25■■□□□ 1.63
SNRNP70-209ENST00000601065 HOMER2Q9NSB8 354 aa25.25■■□□□ 1.63
SNRNP70-209ENST00000601065 RBPJLQ9UBG7 517 aa25.25■■□□□ 1.63
SNRNP70-209ENST00000601065 CNPY2Q9Y2B0 182 aa25.25■■□□□ 1.63
SNRNP70-209ENST00000601065 FAM205CA6NFA0 338 aa25.24■■□□□ 1.63
SNRNP70-209ENST00000601065 GRM1Q13255 1194 aa25.24■■□□□ 1.63
SNRNP70-209ENST00000601065 MUM1L1Q5H9M0 696 aa25.24■■□□□ 1.63
SNRNP70-209ENST00000601065 PIK3AP1Q6ZUJ8 805 aa25.24■■□□□ 1.63
SNRNP70-209ENST00000601065 GTF3C2Q8WUA4 911 aaPredicted RBP25.24■■□□□ 1.63
SNRNP70-209ENST00000601065 TRERF1Q96PN7 1200 aa25.24■■□□□ 1.63
SNRNP70-209ENST00000601065 TXNRD2Q9NNW7 524 aa25.24■■□□□ 1.63
SNRNP70-209ENST00000601065 ZCCHC17Q9NP64 241 aaKnown RBP25.24■■□□□ 1.63
SNRNP70-209ENST00000601065 RABGAP1Q9Y3P9 1069 aa25.24■■□□□ 1.63
SNRNP70-209ENST00000601065 PIK3CDO00329 1044 aa25.23■■□□□ 1.63
SNRNP70-209ENST00000601065 NFIBO00712 420 aa25.23■■□□□ 1.63
SNRNP70-209ENST00000601065 SREBF2Q12772 1141 aa25.23■■□□□ 1.63
SNRNP70-209ENST00000601065 JAKMIP3Q5VZ66 844 aa25.23■■□□□ 1.63
SNRNP70-209ENST00000601065 TEX2Q8IWB9 1127 aa25.23■■□□□ 1.63
SNRNP70-209ENST00000601065 ZIC5Q96T25 663 aa25.23■■□□□ 1.63
SNRNP70-209ENST00000601065 PARK7Q99497 189 aaKnown RBP25.23■■□□□ 1.63
SNRNP70-209ENST00000601065 SPATC1LQ9H0A9 340 aa25.23■■□□□ 1.63
SNRNP70-209ENST00000601065 GDPD2Q9HCC8 539 aa25.23■■□□□ 1.63
SNRNP70-209ENST00000601065 TMEM260Q9NX78 707 aa25.23■■□□□ 1.63
SNRNP70-209ENST00000601065 CCDC194A0A1B0GVG4 234 aa25.23■■□□□ 1.63
SNRNP70-209ENST00000601065 TKFCQ3LXA3 575 aa25.23■■□□□ 1.63
SNRNP70-209ENST00000601065 TBC1D5Q92609 795 aa25.23■■□□□ 1.63
SNRNP70-209ENST00000601065 RNF146Q9NTX7 359 aa25.23■■□□□ 1.63
SNRNP70-209ENST00000601065 CFBP00751 764 aa25.22■■□□□ 1.63
SNRNP70-209ENST00000601065 KRT85P78386 507 aa25.22■■□□□ 1.63
SNRNP70-209ENST00000601065 KRT25Q7Z3Z0 450 aa25.22■■□□□ 1.63
SNRNP70-209ENST00000601065 IFNL1Q8IU54 200 aa25.22■■□□□ 1.63
SNRNP70-209ENST00000601065 RIOX2Q8IUF8 465 aa25.22■■□□□ 1.63
SNRNP70-209ENST00000601065 TFIP11Q9UBB9 837 aaKnown RBP25.22■■□□□ 1.63
SNRNP70-209ENST00000601065 RBBP6Q7Z6E9 1792 aaKnown RBP25.22■■□□□ 1.63
SNRNP70-209ENST00000601065 NOGQ13253 232 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms