RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 CTAGE4Q8IX94 777 aa22.67■■□□□ 1.22
SHKBP1-225ENST00000600733 EYA3Q99504 573 aa22.67■■□□□ 1.22
SHKBP1-225ENST00000600733 TUBGCP2Q9BSJ2 902 aa22.67■■□□□ 1.22
SHKBP1-225ENST00000600733 RTFDC1Q9BY42 306 aaPredicted RBP22.67■■□□□ 1.22
SHKBP1-225ENST00000600733 TRIM9Q9C026 710 aa22.67■■□□□ 1.22
SHKBP1-225ENST00000600733 SUGCTQ9HAC7 445 aa22.67■■□□□ 1.22
SHKBP1-225ENST00000600733 AGPAT5Q9NUQ2 364 aa22.67■■□□□ 1.22
SHKBP1-225ENST00000600733 SNED1Q8TER0 1413 aa22.67■■□□□ 1.22
SHKBP1-225ENST00000600733 SMCO2A6NFE2 343 aa22.66■■□□□ 1.22
SHKBP1-225ENST00000600733 HERVK_113P62684 666 aa22.66■■□□□ 1.22
SHKBP1-225ENST00000600733 PDE4DQ08499 809 aa22.66■■□□□ 1.22
SHKBP1-225ENST00000600733 NOA1Q8NC60 698 aaKnown RBP22.66■■□□□ 1.22
SHKBP1-225ENST00000600733 HNRNPLLQ8WVV9 542 aaKnown RBP22.66■■□□□ 1.22
SHKBP1-225ENST00000600733 LEMD3Q9Y2U8 911 aa22.66■■□□□ 1.22
SHKBP1-225ENST00000600733 H3BQF6 201 aa22.66■■□□□ 1.22
SHKBP1-225ENST00000600733 ENC1O14682 589 aa22.66■■□□□ 1.22
SHKBP1-225ENST00000600733 FCER1AP12319 257 aa22.66■■□□□ 1.22
SHKBP1-225ENST00000600733 TECP42680 631 aa22.66■■□□□ 1.22
SHKBP1-225ENST00000600733 CDK8P49336 464 aa22.66■■□□□ 1.22
SHKBP1-225ENST00000600733 GYS2P54840 703 aa22.66■■□□□ 1.22
SHKBP1-225ENST00000600733 GRAPQ13588 217 aa22.66■■□□□ 1.22
SHKBP1-225ENST00000600733 GRAPLQ8TC17 118 aaPredicted RBP22.66■■□□□ 1.22
SHKBP1-225ENST00000600733 DHTKD1Q96HY7 919 aaPredicted RBP22.66■■□□□ 1.22
SHKBP1-225ENST00000600733 SPZ1Q9BXG8 430 aa22.66■■□□□ 1.22
SHKBP1-225ENST00000600733 VAT1LQ9HCJ6 419 aa22.66■■□□□ 1.22
SHKBP1-225ENST00000600733 CCDC66A2RUB6 948 aa22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 POTEB2H3BUK9 544 aa22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 SRGNP10124 158 aa22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 BTDP43251 543 aa22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 DNM2P50570 870 aa22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 VSNL1P62760 191 aa22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 ASIC1P78348 528 aa22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 PIP4K2BP78356 416 aa22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 MCM6Q14566 821 aa22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 NONOQ15233 471 aaKnown RBP eCLIP22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 TSR1Q2NL82 804 aaKnown RBP22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 ANKRD40Q6AI12 368 aa22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 KRT25Q7Z3Z0 450 aa22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 P2RX5Q93086 422 aa22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 LZTS2Q9BRK4 669 aa22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 ABCB6Q9NP58 842 aa22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 EXOC1Q9NV70 894 aa22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 HDAC6Q9UBN7 1215 aa22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 CCNL1Q9UK58 526 aaPredicted RBP22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 CDK5RAP2Q96SN8 1893 aa22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 RASSF10A6NK89 507 aa22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 NKRFO15226 690 aaKnown RBP eCLIP22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 FAM182BQ5T319 152 aa22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 ZNF804AQ7Z570 1209 aa22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 HPS3Q969F9 1004 aa22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 AK8Q96MA6 479 aa22.65■■□□□ 1.22
SHKBP1-225ENST00000600733 ZBTB22O15209 634 aa22.64■■□□□ 1.22
SHKBP1-225ENST00000600733 TRIM21P19474 475 aaKnown RBP22.64■■□□□ 1.22
SHKBP1-225ENST00000600733 CNOT6LQ96LI5 555 aaKnown RBP22.64■■□□□ 1.22
SHKBP1-225ENST00000600733 TTYH3Q9C0H2 523 aa22.64■■□□□ 1.22
SHKBP1-225ENST00000600733 CUEDC2Q9H467 287 aa22.64■■□□□ 1.22
SHKBP1-225ENST00000600733 DDX60LQ5H9U9 1706 aaKnown RBP22.64■■□□□ 1.21
SHKBP1-225ENST00000600733 LDHCP07864 332 aa22.64■■□□□ 1.21
SHKBP1-225ENST00000600733 CCNE1P24864 410 aa22.64■■□□□ 1.21
SHKBP1-225ENST00000600733 CCDC122Q5T0U0 273 aa22.64■■□□□ 1.21
SHKBP1-225ENST00000600733 NEK8Q86SG6 692 aa22.64■■□□□ 1.21
SHKBP1-225ENST00000600733 NEK11Q8NG66 645 aa22.64■■□□□ 1.21
SHKBP1-225ENST00000600733 HAUS4Q9H6D7 363 aa22.64■■□□□ 1.21
SHKBP1-225ENST00000600733 BTAF1O14981 1849 aa22.63■■□□□ 1.21
SHKBP1-225ENST00000600733 TBC1D8BQ0IIM8 1120 aa22.63■■□□□ 1.21
SHKBP1-225ENST00000600733 C16orf86Q6ZW13 317 aa22.63■■□□□ 1.21
SHKBP1-225ENST00000600733 NOC3LQ8WTT2 800 aaKnown RBP22.63■■□□□ 1.21
SHKBP1-225ENST00000600733 CEP95Q96GE4 821 aa22.63■■□□□ 1.21
SHKBP1-225ENST00000600733 PIGSQ96S52 555 aa22.63■■□□□ 1.21
SHKBP1-225ENST00000600733 MMTAG2Q9BU76 263 aaKnown RBP22.63■■□□□ 1.21
SHKBP1-225ENST00000600733 C6orf50Q9HD87 102 aa22.63■■□□□ 1.21
SHKBP1-225ENST00000600733 MEA1Q16626 185 aa22.62■■□□□ 1.21
SHKBP1-225ENST00000600733 TAF3Q5VWG9 929 aa22.62■■□□□ 1.21
SHKBP1-225ENST00000600733 POTEDQ86YR6 584 aa22.62■■□□□ 1.21
SHKBP1-225ENST00000600733 TEX11Q8IYF3 940 aa22.62■■□□□ 1.21
SHKBP1-225ENST00000600733 TBCKQ8TEA7 893 aa22.62■■□□□ 1.21
SHKBP1-225ENST00000600733 RRP36Q96EU6 259 aaKnown RBP22.62■■□□□ 1.21
SHKBP1-225ENST00000600733 C7orf25Q9BPX7 421 aa22.62■■□□□ 1.21
SHKBP1-225ENST00000600733 MAGEF1Q9HAY2 307 aa22.62■■□□□ 1.21
SHKBP1-225ENST00000600733 ZNF287Q9HBT7 754 aa22.62■■□□□ 1.21
SHKBP1-225ENST00000600733 PDE11AQ9HCR9 933 aa22.62■■□□□ 1.21
SHKBP1-225ENST00000600733 BIN2Q9UBW5 565 aaPredicted RBP22.62■■□□□ 1.21
SHKBP1-225ENST00000600733 PSMD14O00487 310 aa22.62■■□□□ 1.21
SHKBP1-225ENST00000600733 ATP1A1P05023 1023 aaKnown RBP22.62■■□□□ 1.21
SHKBP1-225ENST00000600733 GNA11P29992 359 aa22.62■■□□□ 1.21
SHKBP1-225ENST00000600733 TUBB4BP68371 445 aa22.62■■□□□ 1.21
SHKBP1-225ENST00000600733 TRAPPC11Q7Z392 1133 aa22.62■■□□□ 1.21
SHKBP1-225ENST00000600733 L1RE1Q9UN81 338 aa22.62■■□□□ 1.21
SHKBP1-225ENST00000600733 ERLIN1O75477 346 aa22.61■■□□□ 1.21
SHKBP1-225ENST00000600733 SEMA3FQ13275 785 aa22.61■■□□□ 1.21
SHKBP1-225ENST00000600733 MIIPQ5JXC2 388 aa22.61■■□□□ 1.21
SHKBP1-225ENST00000600733 HDXQ7Z353 690 aa22.61■■□□□ 1.21
SHKBP1-225ENST00000600733 NEDD1Q8NHV4 660 aa22.61■■□□□ 1.21
SHKBP1-225ENST00000600733 UBA5Q9GZZ9 404 aa22.61■■□□□ 1.21
SHKBP1-225ENST00000600733 TMEM260Q9NX78 707 aa22.61■■□□□ 1.21
SHKBP1-225ENST00000600733 SEC63Q9UGP8 760 aaKnown RBP22.61■■□□□ 1.21
SHKBP1-225ENST00000600733 BICDL2A1A5D9 508 aa22.61■■□□□ 1.21
SHKBP1-225ENST00000600733 RCCD1A6NED2 376 aa22.61■■□□□ 1.21
SHKBP1-225ENST00000600733 SRGAP2O75044 1071 aa22.61■■□□□ 1.21
SHKBP1-225ENST00000600733 MTIF2P46199 727 aaKnown RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms