RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 ANKZF1Q9H8Y5 726 aa12.54□□□□□ -0.4
ZNF544-213ENST00000599227 USP40Q9NVE5 1235 aa12.54□□□□□ -0.4
ZNF544-213ENST00000599227 CTDP1Q9Y5B0 961 aaPredicted RBP12.54□□□□□ -0.4
ZNF544-213ENST00000599227 ATP1A1P05023 1023 aaKnown RBP12.54□□□□□ -0.4
ZNF544-213ENST00000599227 SERPINB2P05120 415 aa12.54□□□□□ -0.4
ZNF544-213ENST00000599227 FCER1AP12319 257 aa12.54□□□□□ -0.4
ZNF544-213ENST00000599227 TYW1BQ6NUM6 668 aa12.54□□□□□ -0.4
ZNF544-213ENST00000599227 MIGA2Q7L4E1 593 aa12.54□□□□□ -0.4
ZNF544-213ENST00000599227 HDXQ7Z353 690 aa12.54□□□□□ -0.4
ZNF544-213ENST00000599227 ZNF804AQ7Z570 1209 aa12.54□□□□□ -0.4
ZNF544-213ENST00000599227 PANX2Q96RD6 677 aa12.54□□□□□ -0.4
ZNF544-213ENST00000599227 PCDHAC2Q9Y5I4 1007 aa12.54□□□□□ -0.4
ZNF544-213ENST00000599227 EIF3JO75822 258 aaKnown RBP12.53□□□□□ -0.4
ZNF544-213ENST00000599227 TTBK2Q6IQ55 1244 aa12.53□□□□□ -0.4
ZNF544-213ENST00000599227 FOXR1Q6PIV2 292 aa12.53□□□□□ -0.4
ZNF544-213ENST00000599227 SAMM50Q9Y512 469 aa12.53□□□□□ -0.4
ZNF544-213ENST00000599227 TCP10L2B9ZVM9 353 aa12.53□□□□□ -0.4
ZNF544-213ENST00000599227 PSMA7O14818 248 aa12.53□□□□□ -0.4
ZNF544-213ENST00000599227 NDUFA10O95299 355 aa12.53□□□□□ -0.4
ZNF544-213ENST00000599227 SLC7A5Q01650 507 aa12.53□□□□□ -0.4
ZNF544-213ENST00000599227 CCDC40Q4G0X9 1142 aa12.53□□□□□ -0.4
ZNF544-213ENST00000599227 ZNF579Q8NAF0 562 aaKnown RBP12.53□□□□□ -0.4
ZNF544-213ENST00000599227 KCNQ5Q9NR82 932 aa12.53□□□□□ -0.4
ZNF544-213ENST00000599227 EXOC1Q9NV70 894 aa12.53□□□□□ -0.4
ZNF544-213ENST00000599227 NTSR2O95665 410 aa12.53□□□□□ -0.4
ZNF544-213ENST00000599227 C2orf54Q08AI8 447 aa12.53□□□□□ -0.4
ZNF544-213ENST00000599227 CASP8Q14790 479 aa12.53□□□□□ -0.4
ZNF544-213ENST00000599227 RSRC2Q7L4I2 434 aaKnown RBP12.53□□□□□ -0.4
ZNF544-213ENST00000599227 DNAAF5Q86Y56 855 aa12.53□□□□□ -0.4
ZNF544-213ENST00000599227 SEPT12Q8IYM1 358 aa12.53□□□□□ -0.4
ZNF544-213ENST00000599227 TXLNBQ8N3L3 684 aa12.53□□□□□ -0.4
ZNF544-213ENST00000599227 OR8K1Q8NGG5 319 aa12.53□□□□□ -0.4
ZNF544-213ENST00000599227 NOC4LQ9BVI4 516 aaKnown RBP12.53□□□□□ -0.4
ZNF544-213ENST00000599227 EHD2Q9NZN4 543 aa12.53□□□□□ -0.4
ZNF544-213ENST00000599227 LCMT1Q9UIC8 334 aa12.53□□□□□ -0.4
ZNF544-213ENST00000599227 NWD2Q9ULI1 1742 aa12.52□□□□□ -0.4
ZNF544-213ENST00000599227 POTEMA6NI47 508 aa12.52□□□□□ -0.4
ZNF544-213ENST00000599227 SFI1A8K8P3 1242 aa12.52□□□□□ -0.4
ZNF544-213ENST00000599227 TMCO5BA8MYB1 307 aa12.52□□□□□ -0.4
ZNF544-213ENST00000599227 GTPBP6O43824 516 aaPredicted RBP12.52□□□□□ -0.4
ZNF544-213ENST00000599227 PLEKP08567 350 aaPredicted RBP12.52□□□□□ -0.4
ZNF544-213ENST00000599227 ZFYVE27Q5T4F4 411 aa12.52□□□□□ -0.4
ZNF544-213ENST00000599227 CCDC174Q6PII3 467 aa12.52□□□□□ -0.4
ZNF544-213ENST00000599227 JAKMIP2Q96AA8 810 aa12.52□□□□□ -0.4
ZNF544-213ENST00000599227 MMS19Q96T76 1030 aa12.52□□□□□ -0.4
ZNF544-213ENST00000599227 RIOK1Q9BRS2 568 aaKnown RBP12.52□□□□□ -0.4
ZNF544-213ENST00000599227 QTRT2Q9H974 415 aaKnown RBP12.52□□□□□ -0.4
ZNF544-213ENST00000599227 ABCC6O95255 1503 aa12.52□□□□□ -0.41
ZNF544-213ENST00000599227 CCDC151A5D8V7 595 aa12.52□□□□□ -0.41
ZNF544-213ENST00000599227 USP17L5A8MUK1 530 aa12.52□□□□□ -0.41
ZNF544-213ENST00000599227 NKRFO15226 690 aaKnown RBP eCLIP12.52□□□□□ -0.41
ZNF544-213ENST00000599227 AKR1B10O60218 316 aa12.52□□□□□ -0.41
ZNF544-213ENST00000599227 SHROOM1Q2M3G4 852 aaPredicted RBP12.52□□□□□ -0.41
ZNF544-213ENST00000599227 KCND1Q9NSA2 647 aa12.52□□□□□ -0.41
ZNF544-213ENST00000599227 RBM28Q9NW13 759 aaKnown RBP12.52□□□□□ -0.41
ZNF544-213ENST00000599227 COL5A2P05997 1499 aaPredicted RBP12.52□□□□□ -0.41
ZNF544-213ENST00000599227 FAM237AA0A1B0GTK4 181 aa12.51□□□□□ -0.41
ZNF544-213ENST00000599227 RAD17O75943 681 aa12.51□□□□□ -0.41
ZNF544-213ENST00000599227 HOXA13P31271 388 aaPredicted RBP12.51□□□□□ -0.41
ZNF544-213ENST00000599227 USP17L15C9J2P7 530 aa12.51□□□□□ -0.41
ZNF544-213ENST00000599227 USP17L13C9JLJ4 530 aa12.51□□□□□ -0.41
ZNF544-213ENST00000599227 USP17L11C9JVI0 530 aa12.51□□□□□ -0.41
ZNF544-213ENST00000599227 USP17L18D6R9N7 530 aa12.51□□□□□ -0.41
ZNF544-213ENST00000599227 USP17L22D6RA61 530 aa12.51□□□□□ -0.41
ZNF544-213ENST00000599227 USP17L17D6RBQ6 530 aa12.51□□□□□ -0.41
ZNF544-213ENST00000599227 USP17L19D6RCP7 530 aa12.51□□□□□ -0.41
ZNF544-213ENST00000599227 USP17L20D6RJB6 530 aa12.51□□□□□ -0.41
ZNF544-213ENST00000599227 BUB1O43683 1085 aa12.51□□□□□ -0.41
ZNF544-213ENST00000599227 ATP2C1P98194 919 aaPredicted RBP12.51□□□□□ -0.41
ZNF544-213ENST00000599227 USP17L24Q0WX57 530 aa12.51□□□□□ -0.41
ZNF544-213ENST00000599227 WDR78Q5VTH9 848 aa12.51□□□□□ -0.41
ZNF544-213ENST00000599227 USP17L6PQ6QN14 398 aa12.51□□□□□ -0.41
ZNF544-213ENST00000599227 APTXQ7Z2E3 356 aaKnown RBP12.51□□□□□ -0.41
ZNF544-213ENST00000599227 C2CD5Q86YS7 1000 aa12.51□□□□□ -0.41
ZNF544-213ENST00000599227 ZNF512BQ96KM6 892 aaPredicted RBP12.51□□□□□ -0.41
ZNF544-213ENST00000599227 TUBGCP2Q9BSJ2 902 aa12.51□□□□□ -0.41
ZNF544-213ENST00000599227 CNTNAP5Q8WYK1 1306 aa12.51□□□□□ -0.41
ZNF544-213ENST00000599227 ERVV-1B6SEH8 477 aa12.51□□□□□ -0.41
ZNF544-213ENST00000599227 PLCG1P19174 1290 aa12.51□□□□□ -0.41
ZNF544-213ENST00000599227 CDR1P51861 262 aa12.51□□□□□ -0.41
ZNF544-213ENST00000599227 PROCA1Q8NCQ7 364 aaPredicted RBP12.51□□□□□ -0.41
ZNF544-213ENST00000599227 ZNF384Q8TF68 577 aa12.51□□□□□ -0.41
ZNF544-213ENST00000599227 CCDC42Q96M95 316 aa12.51□□□□□ -0.41
ZNF544-213ENST00000599227 LACRTQ9GZZ8 138 aa12.51□□□□□ -0.41
ZNF544-213ENST00000599227 PNPLA7Q6ZV29 1317 aa12.51□□□□□ -0.41
ZNF544-213ENST00000599227 LDHCP07864 332 aa12.5□□□□□ -0.41
ZNF544-213ENST00000599227 SPAG1Q07617 926 aa12.5□□□□□ -0.41
ZNF544-213ENST00000599227 SPA17Q15506 151 aa12.5□□□□□ -0.41
ZNF544-213ENST00000599227 CCDC181Q5TID7 509 aa12.5□□□□□ -0.41
ZNF544-213ENST00000599227 ZNF658Q5TYW1 1059 aaPredicted RBP12.5□□□□□ -0.41
ZNF544-213ENST00000599227 CCDC155Q8N6L0 562 aa12.5□□□□□ -0.41
ZNF544-213ENST00000599227 FAM204AQ9H8W3 233 aa12.5□□□□□ -0.41
ZNF544-213ENST00000599227 EP400Q96L91 3159 aa12.5□□□□□ -0.41
ZNF544-213ENST00000599227 CFBP00751 764 aa12.5□□□□□ -0.41
ZNF544-213ENST00000599227 CHRNA5P30532 468 aa12.5□□□□□ -0.41
ZNF544-213ENST00000599227 GPSM2P81274 684 aa12.5□□□□□ -0.41
ZNF544-213ENST00000599227 PRPF4BQ13523 1007 aaKnown RBP12.5□□□□□ -0.41
ZNF544-213ENST00000599227 DCAF17Q5H9S7 520 aaPredicted RBP12.5□□□□□ -0.41
ZNF544-213ENST00000599227 NT5DC1Q5TFE4 455 aa12.5□□□□□ -0.41
ZNF544-213ENST00000599227 CDKAL1Q5VV42 579 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms