RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 CCDC96Q2M329 555 aa12.5□□□□□ -0.41
CHMP2A-202ENST00000596708 TMEM240Q5SV17 173 aa12.5□□□□□ -0.41
CHMP2A-202ENST00000596708 CXCL17Q6UXB2 119 aa12.5□□□□□ -0.41
CHMP2A-202ENST00000596708 NSMFQ6X4W1 530 aa12.5□□□□□ -0.41
CHMP2A-202ENST00000596708 ZNF365Q70YC5 407 aa12.5□□□□□ -0.41
CHMP2A-202ENST00000596708 EEPD1Q7L9B9 569 aa12.5□□□□□ -0.41
CHMP2A-202ENST00000596708 TLK2Q86UE8 772 aa12.5□□□□□ -0.41
CHMP2A-202ENST00000596708 FAM126BQ8IXS8 530 aa12.5□□□□□ -0.41
CHMP2A-202ENST00000596708 TIFAQ96CG3 184 aa12.5□□□□□ -0.41
CHMP2A-202ENST00000596708 ZNF576Q9H609 170 aa12.5□□□□□ -0.41
CHMP2A-202ENST00000596708 IL17RBQ9NRM6 502 aa12.5□□□□□ -0.41
CHMP2A-202ENST00000596708 TOMM22Q9NS69 142 aa12.5□□□□□ -0.41
CHMP2A-202ENST00000596708 PRR12Q9ULL5 1215 aa12.5□□□□□ -0.41
CHMP2A-202ENST00000596708 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.5□□□□□ -0.41
CHMP2A-202ENST00000596708 MYH7BA7E2Y1 1941 aa12.5□□□□□ -0.41
CHMP2A-202ENST00000596708 SCN5AQ14524 2016 aa12.5□□□□□ -0.41
CHMP2A-202ENST00000596708 ASTN1O14525 1302 aa12.49□□□□□ -0.41
CHMP2A-202ENST00000596708 CTAGE5O15320 804 aa12.49□□□□□ -0.41
CHMP2A-202ENST00000596708 CABYRO75952 493 aa12.49□□□□□ -0.41
CHMP2A-202ENST00000596708 MUM1L1Q5H9M0 696 aa12.49□□□□□ -0.41
CHMP2A-202ENST00000596708 ANKRD45Q5TZF3 282 aa12.49□□□□□ -0.41
CHMP2A-202ENST00000596708 C16orf59Q7L2K0 433 aa12.49□□□□□ -0.41
CHMP2A-202ENST00000596708 PDGFCQ9NRA1 345 aa12.49□□□□□ -0.41
CHMP2A-202ENST00000596708 CCPG1Q9ULG6 757 aa12.49□□□□□ -0.41
CHMP2A-202ENST00000596708 GNEQ9Y223 722 aaKnown RBP12.49□□□□□ -0.41
CHMP2A-202ENST00000596708 DDX49Q9Y6V7 483 aaKnown RBP12.49□□□□□ -0.41
CHMP2A-202ENST00000596708 LAMA2P24043 3122 aaKnown RBP12.48□□□□□ -0.41
CHMP2A-202ENST00000596708 GRXCR1A8MXD5 290 aa12.48□□□□□ -0.41
CHMP2A-202ENST00000596708 CD4P01730 458 aa12.48□□□□□ -0.41
CHMP2A-202ENST00000596708 SMPD1P17405 629 aa12.48□□□□□ -0.41
CHMP2A-202ENST00000596708 CYP2C18P33260 490 aa12.48□□□□□ -0.41
CHMP2A-202ENST00000596708 ITGA7Q13683 1181 aa12.48□□□□□ -0.41
CHMP2A-202ENST00000596708 FSCN1Q16658 493 aaKnown RBP12.48□□□□□ -0.41
CHMP2A-202ENST00000596708 RRP12Q5JTH9 1297 aaKnown RBP12.48□□□□□ -0.41
CHMP2A-202ENST00000596708 VPS53Q5VIR6 699 aa12.48□□□□□ -0.41
CHMP2A-202ENST00000596708 IQSEC1Q6DN90 963 aa12.48□□□□□ -0.41
CHMP2A-202ENST00000596708 PSRC1Q6PGN9 363 aaPredicted RBP12.48□□□□□ -0.41
CHMP2A-202ENST00000596708 KIAA1211Q6ZU35 1233 aa12.48□□□□□ -0.41
CHMP2A-202ENST00000596708 RASGRP2Q7LDG7 609 aa12.48□□□□□ -0.41
CHMP2A-202ENST00000596708 FBXO16Q8IX29 292 aaPredicted RBP12.48□□□□□ -0.41
CHMP2A-202ENST00000596708 CYP39A1Q9NYL5 469 aa12.48□□□□□ -0.41
CHMP2A-202ENST00000596708 UNC80Q8N2C7 3258 aa12.47□□□□□ -0.41
CHMP2A-202ENST00000596708 TCF20Q9UGU0 1960 aaKnown RBP12.47□□□□□ -0.41
CHMP2A-202ENST00000596708 FGBP02675 491 aa12.47□□□□□ -0.41
CHMP2A-202ENST00000596708 PTGS1P23219 599 aa12.47□□□□□ -0.41
CHMP2A-202ENST00000596708 SLC16A2P36021 539 aa12.47□□□□□ -0.41
CHMP2A-202ENST00000596708 PBX2P40425 430 aa12.47□□□□□ -0.41
CHMP2A-202ENST00000596708 NKX3-2P78367 333 aa12.47□□□□□ -0.41
CHMP2A-202ENST00000596708 TTBK2Q6IQ55 1244 aa12.47□□□□□ -0.41
CHMP2A-202ENST00000596708 TAPT1Q6NXT6 567 aa12.47□□□□□ -0.41
CHMP2A-202ENST00000596708 DCAF4Q8WV16 495 aa12.47□□□□□ -0.41
CHMP2A-202ENST00000596708 PPM1EQ8WY54 764 aa12.47□□□□□ -0.41
CHMP2A-202ENST00000596708 EVI5LQ96CN4 794 aa12.47□□□□□ -0.41
CHMP2A-202ENST00000596708 GAS2L1Q99501 681 aaPredicted RBP12.47□□□□□ -0.41
CHMP2A-202ENST00000596708 PBX4Q9BYU1 374 aa12.47□□□□□ -0.41
CHMP2A-202ENST00000596708 MTIF3Q9H2K0 278 aaKnown RBP12.47□□□□□ -0.41
CHMP2A-202ENST00000596708 HIPK3Q9H422 1215 aa12.47□□□□□ -0.41
CHMP2A-202ENST00000596708 IL23AQ9NPF7 189 aa12.47□□□□□ -0.41
CHMP2A-202ENST00000596708 HELLSQ9NRZ9 838 aa12.47□□□□□ -0.41
CHMP2A-202ENST00000596708 MSRAQ9UJ68 235 aa12.47□□□□□ -0.41
CHMP2A-202ENST00000596708 ANAPC4Q9UJX5 808 aa12.47□□□□□ -0.41
CHMP2A-202ENST00000596708 CDH23Q9H251 3354 aa12.47□□□□□ -0.41
CHMP2A-202ENST00000596708 KIAA1217Q5T5P2 1943 aa12.47□□□□□ -0.41
CHMP2A-202ENST00000596708 FRMPD2Q68DX3 1309 aaPredicted RBP12.46□□□□□ -0.41
CHMP2A-202ENST00000596708 FOXP2O15409 715 aa12.46□□□□□ -0.41
CHMP2A-202ENST00000596708 ICAM1P05362 532 aa12.46□□□□□ -0.41
CHMP2A-202ENST00000596708 CCL23P55773 120 aa12.46□□□□□ -0.41
CHMP2A-202ENST00000596708 PSMC6P62333 389 aa12.46□□□□□ -0.41
CHMP2A-202ENST00000596708 BAATQ14032 418 aaPredicted RBP12.46□□□□□ -0.41
CHMP2A-202ENST00000596708 SLC43A3Q8NBI5 491 aa12.46□□□□□ -0.41
CHMP2A-202ENST00000596708 SYMPKQ92797 1274 aaKnown RBP12.46□□□□□ -0.41
CHMP2A-202ENST00000596708 PURBQ96QR8 312 aaKnown RBP12.46□□□□□ -0.41
CHMP2A-202ENST00000596708 SEZ6LQ9BYH1 1024 aa12.46□□□□□ -0.41
CHMP2A-202ENST00000596708 RANBP17Q9H2T7 1088 aaKnown RBP12.46□□□□□ -0.41
CHMP2A-202ENST00000596708 VTA1Q9NP79 307 aa12.46□□□□□ -0.41
CHMP2A-202ENST00000596708 GPCPD1Q9NPB8 672 aa12.46□□□□□ -0.41
CHMP2A-202ENST00000596708 ADD3Q9UEY8 706 aaKnown RBP12.46□□□□□ -0.41
CHMP2A-202ENST00000596708 Q9Y3F1 56 aa12.46□□□□□ -0.41
CHMP2A-202ENST00000596708 A0A0C4DFX4 3053 aa12.46□□□□□ -0.41
CHMP2A-202ENST00000596708 PTPDC1A2A3K4 754 aa12.45□□□□□ -0.42
CHMP2A-202ENST00000596708 ORC4O43929 436 aa12.45□□□□□ -0.42
CHMP2A-202ENST00000596708 FGAP02671 866 aa12.45□□□□□ -0.42
CHMP2A-202ENST00000596708 TOP1P11387 765 aaKnown RBP12.45□□□□□ -0.42
CHMP2A-202ENST00000596708 ALX1Q15699 326 aa12.45□□□□□ -0.42
CHMP2A-202ENST00000596708 RAB30Q15771 203 aa12.45□□□□□ -0.42
CHMP2A-202ENST00000596708 MCMDC2Q4G0Z9 681 aa12.45□□□□□ -0.42
CHMP2A-202ENST00000596708 TMEM63BQ5T3F8 832 aa12.45□□□□□ -0.42
CHMP2A-202ENST00000596708 RASIP1Q5U651 963 aa12.45□□□□□ -0.42
CHMP2A-202ENST00000596708 SYDE2Q5VT97 1194 aa12.45□□□□□ -0.42
CHMP2A-202ENST00000596708 OTOP2Q7RTS6 562 aa12.45□□□□□ -0.42
CHMP2A-202ENST00000596708 HERVK_113Q902F9 699 aa12.45□□□□□ -0.42
CHMP2A-202ENST00000596708 TMEM47Q9BQJ4 181 aa12.45□□□□□ -0.42
CHMP2A-202ENST00000596708 PRDM12Q9H4Q4 367 aa12.45□□□□□ -0.42
CHMP2A-202ENST00000596708 SCN10AQ9Y5Y9 1956 aa12.45□□□□□ -0.42
CHMP2A-202ENST00000596708 TET1Q8NFU7 2136 aa12.44□□□□□ -0.42
CHMP2A-202ENST00000596708 GRIN2DO15399 1336 aa12.44□□□□□ -0.42
CHMP2A-202ENST00000596708 UMODL1Q5DID0 1318 aa12.44□□□□□ -0.42
CHMP2A-202ENST00000596708 SALL3Q9BXA9 1300 aa12.44□□□□□ -0.42
CHMP2A-202ENST00000596708 B4GALT4O60513 344 aa12.44□□□□□ -0.42
CHMP2A-202ENST00000596708 CALML3P27482 149 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms