RNA–Protein interactions for RNA: ENST00000594107.1

XRCC1-203, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-203ENST00000594107 FAM133AQ8N9E0 248 aa10.18□□□□□ -0.78
XRCC1-203ENST00000594107 PHOSPHO2Q8TCD6 241 aa10.18□□□□□ -0.78
XRCC1-203ENST00000594107 RHPN1Q8TCX5 695 aa10.18□□□□□ -0.78
XRCC1-203ENST00000594107 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.18□□□□□ -0.78
XRCC1-203ENST00000594107 SLC9A7Q96T83 725 aa10.18□□□□□ -0.78
XRCC1-203ENST00000594107 ALDH8A1Q9H2A2 487 aaPredicted RBP10.18□□□□□ -0.78
XRCC1-203ENST00000594107 MKNK2Q9HBH9 465 aa10.18□□□□□ -0.78
XRCC1-203ENST00000594107 PDGFCQ9NRA1 345 aa10.18□□□□□ -0.78
XRCC1-203ENST00000594107 FEM1BQ9UK73 627 aa10.18□□□□□ -0.78
XRCC1-203ENST00000594107 COG6Q9Y2V7 657 aa10.18□□□□□ -0.78
XRCC1-203ENST00000594107 Q9Y3F1 56 aa10.18□□□□□ -0.78
XRCC1-203ENST00000594107 PRRC2BQ5JSZ5 2229 aaKnown RBP10.18□□□□□ -0.78
XRCC1-203ENST00000594107 SOWAHBA6NEL2 793 aa10.17□□□□□ -0.78
XRCC1-203ENST00000594107 PRR33A8MZF0 331 aa10.17□□□□□ -0.78
XRCC1-203ENST00000594107 IFIT2P09913 472 aaKnown RBP10.17□□□□□ -0.78
XRCC1-203ENST00000594107 MRE11P49959 708 aa10.17□□□□□ -0.78
XRCC1-203ENST00000594107 OAZ1P54368 228 aa10.17□□□□□ -0.78
XRCC1-203ENST00000594107 HSP90AB4PQ58FF6 505 aa10.17□□□□□ -0.78
XRCC1-203ENST00000594107 KIAA1211Q6ZU35 1233 aa10.17□□□□□ -0.78
XRCC1-203ENST00000594107 EEPD1Q7L9B9 569 aa10.17□□□□□ -0.78
XRCC1-203ENST00000594107 ITPRIPQ8IWB1 547 aa10.17□□□□□ -0.78
XRCC1-203ENST00000594107 CLASRPQ8N2M8 674 aaKnown RBP10.17□□□□□ -0.78
XRCC1-203ENST00000594107 RETREG2Q8NC44 543 aa10.17□□□□□ -0.78
XRCC1-203ENST00000594107 UIMC1Q96RL1 719 aa10.17□□□□□ -0.78
XRCC1-203ENST00000594107 FTOQ9C0B1 505 aaKnown RBP eCLIP10.17□□□□□ -0.78
XRCC1-203ENST00000594107 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.17□□□□□ -0.78
XRCC1-203ENST00000594107 ACAD9Q9H845 621 aa10.17□□□□□ -0.78
XRCC1-203ENST00000594107 TRMT13Q9NUP7 481 aaKnown RBP10.17□□□□□ -0.78
XRCC1-203ENST00000594107 PAG1Q9NWQ8 432 aa10.17□□□□□ -0.78
XRCC1-203ENST00000594107 MUC3AQ02505 3323 aa10.17□□□□□ -0.78
XRCC1-203ENST00000594107 TNKSO95271 1327 aa10.16□□□□□ -0.78
XRCC1-203ENST00000594107 ARHGEF15O94989 841 aa10.16□□□□□ -0.78
XRCC1-203ENST00000594107 CHGBP05060 677 aa10.16□□□□□ -0.78
XRCC1-203ENST00000594107 RASA1P20936 1047 aa10.16□□□□□ -0.78
XRCC1-203ENST00000594107 FAM47CQ5HY64 1035 aa10.16□□□□□ -0.78
XRCC1-203ENST00000594107 TAPT1Q6NXT6 567 aa10.16□□□□□ -0.78
XRCC1-203ENST00000594107 HERC6Q8IVU3 1022 aa10.16□□□□□ -0.78
XRCC1-203ENST00000594107 MKL1Q969V6 931 aa10.16□□□□□ -0.78
XRCC1-203ENST00000594107 TRERF1Q96PN7 1200 aa10.16□□□□□ -0.78
XRCC1-203ENST00000594107 BOLA2Q9H3K6 86 aa10.16□□□□□ -0.78
XRCC1-203ENST00000594107 DDX49Q9Y6V7 483 aaKnown RBP10.16□□□□□ -0.78
XRCC1-203ENST00000594107 GREB1LQ9C091 1923 aaPredicted RBP10.15□□□□□ -0.78
XRCC1-203ENST00000594107 MINDY4BA8MYZ0 360 aa10.15□□□□□ -0.78
XRCC1-203ENST00000594107 TMEM232C9JQI7 657 aa10.15□□□□□ -0.78
XRCC1-203ENST00000594107 LPXNO60711 386 aa10.15□□□□□ -0.78
XRCC1-203ENST00000594107 MYL3P08590 195 aa10.15□□□□□ -0.78
XRCC1-203ENST00000594107 IQCF3P0C7M6 154 aa10.15□□□□□ -0.78
XRCC1-203ENST00000594107 FDX1P10109 184 aa10.15□□□□□ -0.78
XRCC1-203ENST00000594107 BMP3P12645 472 aa10.15□□□□□ -0.78
XRCC1-203ENST00000594107 SSTR3P32745 418 aaPredicted RBP10.15□□□□□ -0.78
XRCC1-203ENST00000594107 RFC2P35250 354 aa10.15□□□□□ -0.78
XRCC1-203ENST00000594107 CEP85Q6P2H3 762 aa10.15□□□□□ -0.78
XRCC1-203ENST00000594107 SPRED2Q7Z698 418 aa10.15□□□□□ -0.78
XRCC1-203ENST00000594107 FAM178BQ8IXR5 827 aa10.15□□□□□ -0.78
XRCC1-203ENST00000594107 FTSJ3Q8IY81 847 aaKnown RBP10.15□□□□□ -0.78
XRCC1-203ENST00000594107 ZNF444Q8N0Y2 327 aaPredicted RBP10.15□□□□□ -0.78
XRCC1-203ENST00000594107 GJD3Q8N144 294 aa10.15□□□□□ -0.78
XRCC1-203ENST00000594107 ZBED2Q9BTP6 218 aa10.15□□□□□ -0.78
XRCC1-203ENST00000594107 PUS7LQ9H0K6 701 aaKnown RBP10.15□□□□□ -0.78
XRCC1-203ENST00000594107 A1CFQ9NQ94 594 aaKnown RBP10.15□□□□□ -0.78
XRCC1-203ENST00000594107 GPHNQ9NQX3 736 aaPredicted RBP10.15□□□□□ -0.78
XRCC1-203ENST00000594107 RNF146Q9NTX7 359 aa10.15□□□□□ -0.78
XRCC1-203ENST00000594107 POLR3EQ9NVU0 708 aa10.15□□□□□ -0.78
XRCC1-203ENST00000594107 LMCD1Q9NZU5 365 aa10.15□□□□□ -0.78
XRCC1-203ENST00000594107 ARPP21Q9UBL0 812 aaPredicted RBP10.15□□□□□ -0.78
XRCC1-203ENST00000594107 ISY1Q9ULR0 285 aaKnown RBP10.15□□□□□ -0.78
XRCC1-203ENST00000594107 ZBED9Q6R2W3 1325 aa10.14□□□□□ -0.79
XRCC1-203ENST00000594107 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.14□□□□□ -0.79
XRCC1-203ENST00000594107 ALAS1P13196 640 aa10.14□□□□□ -0.79
XRCC1-203ENST00000594107 PURAQ00577 322 aaKnown RBP10.14□□□□□ -0.79
XRCC1-203ENST00000594107 UBE3CQ15386 1083 aa10.14□□□□□ -0.79
XRCC1-203ENST00000594107 CSPP1Q1MSJ5 1256 aa10.14□□□□□ -0.79
XRCC1-203ENST00000594107 NBPF20Q3BBV1 942 aa10.14□□□□□ -0.79
XRCC1-203ENST00000594107 TKFCQ3LXA3 575 aa10.14□□□□□ -0.79
XRCC1-203ENST00000594107 DUSP28Q4G0W2 176 aa10.14□□□□□ -0.79
XRCC1-203ENST00000594107 SBK1Q52WX2 424 aa10.14□□□□□ -0.79
XRCC1-203ENST00000594107 SLFN13Q68D06 897 aa10.14□□□□□ -0.79
XRCC1-203ENST00000594107 FBXO16Q8IX29 292 aaPredicted RBP10.14□□□□□ -0.79
XRCC1-203ENST00000594107 PPP1R13LQ8WUF5 828 aa10.14□□□□□ -0.79
XRCC1-203ENST00000594107 CHMP4CQ96CF2 233 aa10.14□□□□□ -0.79
XRCC1-203ENST00000594107 NCOR1O75376 2440 aa10.14□□□□□ -0.79
XRCC1-203ENST00000594107 MYH7P12883 1935 aa10.13□□□□□ -0.79
XRCC1-203ENST00000594107 ZNF536O15090 1300 aa10.13□□□□□ -0.79
XRCC1-203ENST00000594107 IGKV6D-41A0A0C4DH26 115 aa10.13□□□□□ -0.79
XRCC1-203ENST00000594107 ALADP13716 330 aa10.13□□□□□ -0.79
XRCC1-203ENST00000594107 ATP5JP18859 108 aa10.13□□□□□ -0.79
XRCC1-203ENST00000594107 KCNJ6P48051 423 aa10.13□□□□□ -0.79
XRCC1-203ENST00000594107 IKQ13123 557 aaPredicted RBP10.13□□□□□ -0.79
XRCC1-203ENST00000594107 ZSCAN25Q6NSZ9 544 aa10.13□□□□□ -0.79
XRCC1-203ENST00000594107 RPAP2Q8IXW5 612 aaPredicted RBP10.13□□□□□ -0.79
XRCC1-203ENST00000594107 LRRC47Q8N1G4 583 aaKnown RBP10.13□□□□□ -0.79
XRCC1-203ENST00000594107 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.13□□□□□ -0.79
XRCC1-203ENST00000594107 CHURC1Q8WUH1 139 aa10.13□□□□□ -0.79
XRCC1-203ENST00000594107 STAG1Q8WVM7 1258 aa10.13□□□□□ -0.79
XRCC1-203ENST00000594107 KIF1BPQ96EK5 621 aa10.13□□□□□ -0.79
XRCC1-203ENST00000594107 CEP95Q96GE4 821 aa10.13□□□□□ -0.79
XRCC1-203ENST00000594107 MTG1Q9BT17 334 aaPredicted RBP10.13□□□□□ -0.79
XRCC1-203ENST00000594107 WDR11Q9BZH6 1224 aa10.13□□□□□ -0.79
XRCC1-203ENST00000594107 UBE2ZQ9H832 354 aaPredicted RBP10.13□□□□□ -0.79
XRCC1-203ENST00000594107 VTA1Q9NP79 307 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms